Genetics Flashcards

1
Q

What is the chance of inheriting an autosomal dominant disease from an affected parent?

A

1/2, 50%

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2
Q

What does autosomal dominant inheritance look like?

A

All generations affected, all affected individuals have an affected parent.

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3
Q

What does autosomal recessive inheritance look like?

A

Affected individuals are siblings, not intergenerational. 1/4 chance of future children being affected if one child is affected.

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4
Q

What does Sex-linked recessive inheritance look like?

A

Primarily affects males. No male to male transmission. Daughters of affected fathers are all carriers and have a 50% chance of passing the disease allele on to their sons.

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5
Q

What does mitochondrial inheritance look like?

A

Affected mother passes on disease to all of her children, who may express it to varying degrees. Usually neuromuscular diseases.

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6
Q

If the affected/not affected status of a person who is wanting to know their likelihood of being a carrier is known, who do you account for that in a punnet square/calculation?

A

Exclude the disease genotype from the square or calculation.

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7
Q

What is q^2, 2pq, and p^2 in hardy Weinberg equation?

A
q^2 = prevalence of disease allele in population.
2pq = prevalence of carrier status in population.
p^2 = prevalence of normal allele in population.
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8
Q

What types of mutations are associated with dominant diseases and why?

A

Gain of function (introducing a new function - the normal wildtype allele is not capable of compensating for the allele creating the new function) and dominant negative (a single allele disrupts the function and a normal allele cannot make up for it.)

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9
Q

What types of mutations are associated with recessive diseases and why?

A

Loss of function - a normal allele can make up for an abnormal one, but two abnormal alleles cause protein to not function.

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10
Q

What is the most common cause of normal human genetic variation?

A

Single nucleotide polymorphisms (change in a single base), most common is the C to T SNP (C deaminates into U which changes the RNA transcript to A).

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11
Q

What is linkage disequillibrium?

A

When genes that are close together on a chromosome are inherited together because they do not undergo separate crossing over.

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12
Q

What is an ancestral haplotype?

A

Smallest genetic unit that is inherited together due to linkage disequilibrium. Common haplotypes exist throughout the population. They are tagged with SNPs.

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13
Q

What is HLA and what types of diseases do mutations in it cause?

A

HLA is involved in recognition of self versus non-self, therefore mutation contributes to many autoimmune diseases, but can also cause other non-immune diseases such as hemochromatosis. It was used for determining matches for transplants - very polymorphic gene.

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14
Q

What is the Dose-responsive effect?

A
  • having both high-risk variants multiplies risk for complex disease.
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15
Q

Why is it that you have a higher risk of having CAD when your mother has CAD than when your father has CAD?

A

Men are more likely to have CAD (a complex disorder) than women, so for a woman to have CAD she has to have had more genetic variants putting her at risk for CAD, which her children may then inherit.

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16
Q

If two unaffected parents have two affected children of an autosomal dominant disorder, what is the most-likely cause? and why?

A

germline mosaicism - the mutation is present in the parent, but not in enough cells to be expressed phenotypically, but enough to pass on the mutation to offspring.

17
Q

How does anticipation affect how a disease manifests in a family? why?

A

Age of onset becomes younger and severity increases with each generation. This is because these diseases are related to triplet repeats in the genome that repeat more with each generation.

18
Q

What is the genetic inheritance pattern of behind Angelman’s Syndrome?

A

Imprinting of paternal allele and mutation of maternal allele. (only inherited through mother). Occurs on chromosome 15q.

19
Q

What is the genetic inheritance pattern of Prader Willi Syndrome?

A

Imprinting of maternal allele and mutation of paternal allele. (only inherited through father). Occurs on chromosome 15q.

20
Q

How does uniparental disomy give rise to imprinted or autosomal recessive disorders?

A

One heterozygous parent donates germ cell with two chromosomes for recessive disorder giving the child affected state of an autosomal recessive disorder.

When rescue occurs for the trisomy created in the zygote and the zygote ends up with two of the same parent’s chromosomes, the other parent’s chromosome is silenced.

21
Q

What factors increase likelihood of new mutations in single-gene mendelian disorders?

A

Advanced paternal age.

22
Q

What is the genetic background of Achondroplasia?

A

de novo mutation causing autosomal dominant disorder usually related to advanced paternal age.

23
Q

Osteogenesis imperfecta is an example of what type of inheritance?

A

autosomal dominant germline mosaicism.

24
Q

How is it possible for lethal autosomal dominant disorders to still cause disease/be expressed phenotypically? example?

A

via mosaicism (only expressed in some cells), occurs post-zygote during development of embryo. Ex: port wine stains.

25
Q

Why is Rett syndrome nearly exclusive to females?

A

It is so severe in males that it is lethal

26
Q

What is the function of the X-chromosome gene that is mutated in Rett syndrome?

A

encoding of methyl CpG binding protein, which is involved in epigenetic silencing of methylated DNA - altering major mechanism of gene expression.

27
Q

Can Rett Syndrome be inherited?

A

No - sporadic mutations almost exclusively due to reduced reproductive fitness.

28
Q

What is the genetic basis for fragile X syndrome?

A

Unstable CGG triplet repeat in 5’ UTR region of FMR1 gene. This creates hypermethylation of cytosine and therefore silencing of the gene (transcriptional silencing). This causes loss of function due to loss of RNA binding capability.

29
Q

How can a mother unaffected by fragile X syndrome pass it on to her son?

A

Mother has a pre-mutation (repeated sequence), which expands during maternal meiosis into a full mutation.

30
Q

What are the symptoms of a carrier of fragile X premutation?

A

M: tremors-ataxia. F: premature menopause.

31
Q

Why can some females who are carriers for fragile-X syndrome still exhibit the phenotype.

A

Due to Lyonization/X-chromosome silencing.

32
Q

Advanced maternal age is associated with —-? Advanced paternal age is associated with —-?

A

maternal - nondisjunction. paternal - new mutations.

33
Q

What is the mutation causing Huntington’s and where on a gene is it located?

A

Expanded polyglutamine tracts in Huntington protein, located in an exon. The pathological protein aggregates within neurons, where it is toxic.

34
Q

Protein or RNA aggregates are features of what type of disorders?

A

Anticipation disorders such as fragile X syndrome, myotonic dystrophy, and Huntington’s disease.

35
Q

Why is Rett syndrome survivable in females?

A

likely due to ability of the additional X chromosome to carry out functions disrupted by the dominant/disordered X chromosome.