Genetics Flashcards
Pattern: Lens dislocation upward
Marfan
Pattern: Lens dislocation downward
Homocystinuria
Cardiac problems assoc with Marfan
aortic root dilation, aortic rupture, mitral valve prolapse
- Fibrillin on chromosome 15
Marfan
- TFBR1/2
Marfan 2 and Loeys-Dietz
NF criteria: 2/7
- > 6 cafe au lait >5mm prepub, >15mm prepub
- 2+ neurofibromas
- 2+ lisch nodules of iris
- OPG
- inguinal or axillary freckling
- sphenoid wing dysplasia or thinning of long bone cortex
- 1st degree relative with NR
Pattern: coarse facies, corneal clouding, organomegaly, cogntive loss
Hurler features
- alpha-1 iduronidase
Hurler genetics
Muscle weakness and progression pattern of DMD
symmetric proximal symmetric myopathy, symptoms prior to 5, can’t walk by 13
Majority of DMD mutation
deletion and point mutations
Pattern: coarse facies, hump on back, short stature, cognitive loss, gibbus organomegaly, clear cornea
Features of Hunter
Phenotype of x-linked dominant
Rett - girls only because boys die
IHP of Hunter
x-linked recessive
Gene mutation in MELAS
tRNA genes
Genetic mutation type in myotonic dystrophy
trinucleotide repeats
Genetic mutation type in Fragile X
trinucleotide repeats
Pattern: puffy hands and feet in baby
Turner
Pattern: horseshoe/ectopic kidney, hearing loss, hypothyroidism
Turner
Hormonal abnormality of Turner
hypothydroidism
Congenital heart disease in Turner
Coarctation, bicuspid aortic valve, hypoplastic left heart
Late onset heart disease in Turner syndrome
aortic dissection (increased during pregnancy), HTN
Genetics of Wolf-Hirschhorn syndrome
4p deletion
Pattern: severe retardation, cleft lip/palate, FTT CHD, microcephaly, flat nasal bridge with high arched eyebrows
Wolf-Hirschorn
Cri du chat syndrome
5p delection
Pattern: low birth weight, ID, epicanthal folds, CHD, 5p-
Cri du chat
Pattern: Full lips, smooth philtrum, stellate iris, puffy eyes, bitemproal narrowing, elfin facies, cocktail party, hypercalcemia, supravalvular aortic stenosis, developmental delay
Williams
Genetic deletion in Williams
7q11.23
Pattern: bulbous nose, congenital, thymus hypoplasia, cleft palate, hypocalcemia
22q11.2 - DiGeorge
Pattern: hirsuitism, unibrow (synophyrs), limb anomalies, microcephaly, oligodactyly,
Cornelia de Lange
Genetics of Cornelia de Lange
NIPBL, 5p13
Pattern: small mandible, malar hypoplasia, down slanting palpebral fissures, malformed ears with hearing loss, lower eyelid coloboma
Treacher collins syndrome
Genetics of Treacher Collins syndrome
5q32, treacle
What skin/musculoskeletal finding with fragile X
flat feet, loose joins, soft smooth skin
what cardiac condition
Mitral valve prolapse
What GU problem associated with Fragile X
Macro-orchidism
neuro issue with fragile x syndrome
neuronal migration defects
Lay out plan for eval of pt with Fragile X
Echo - MVP
Vision - strabismus
Eval for loose joints and possible seizures
Adult female/male with pre-mutation of FRM1 CGG repeat will have what symptoms
Female - premature ovarian function
Male - tremors
Pattern: neonatal hypotonia, poor feeding, FTT, DD, almond shaped yes, small hands and feet, obesity and feeding problem, microfallus
Prader-Willi syndrome
Genetics of Prader-Willi syndrome
Paternal 15q deletion
Uniparental disomy chromosome 15
Mutation in imprinting gene
Genetics of Angelman syndrome
Deletion of maternal chromosome 15, paternal uniparental disomy, imprinting gene mutation
Pattern: brushfield spots
T21
Endocrine and GI problems in T21
hypoTH, duodenal atresia
What other variant of genetics can be seen in T21?
Robertsonian translocation in 5%
Pattern: Thin upper lip, philtrum, ID, microcephaly, down-slanting palpebral fissures
FAS
Pattern: Microfallus, hypotonia, depressed nose bridge, fusion of 2/3 toe (syndactylyl), undescended testes
Smith-Lemli-Opitz
- in Smith-Lemli-Opitz
- delta-7-sterol reductase, cholesterol biosynthesis
Pattern: low serum cholesterol level, elevated 7-dehydrocholeterol
Smith-lemli-opitz
Rx for Smith-Lemli-Opitz
diet high in cholesterol, which only improves condition
Dx associated with conotruncal heart defect such as transposition, TOF, interrupted aortic arch, truncus arteriosus
22q deletion syndrome
DiGeorge or velocardiofacial syndromes
Dx supervalvular aortic stenosis
Williams
Dx AV canal
Down
Dx pulmonary valve stenosis, HOCM
Noonan
Dx coarctation of aorta
Turner
Pattern: short stature, ptosis, broad or webbed neck, heart defect, shield chest, developmental delay
Noonan
Dx dilated aortic root
marfan
Pattern: growth deficiency, microcephaly, prominent occiput, small mouth/small jaw, short sternum, cardiac anomalies, cryptorchidism, rocker bottom feet, hypoplastic nails,
Tri18
Pattern: microcephaly, holoprosencephaly, low birth weight, scalp ulceration, iris coloboma, cardiac anomalies, renal and genital anomalies, cleft lip and palate, polydacyly, rocker bottom feet
Tri13
Pattern: wormian bones, bowing of the long bones, small chest bones, blue sclera
Osteogenic imperfect type 2
- OI type 2
AD mutation in COL1A1 and COL1A2
Cause of mortality in OI type 2
inability to ventilate, intracranial hemorrhage
Pattern: triangular head, most common neonatal skeletal dysplasia, cloverleaf skull, short limb dwarfism, severe brain malformations, mutations in FGFR3
thanatophoric dysplasia
Pattern: short stature, extra fold in proximal limbs, chest triangle, frontal bossing, trident hand, small foramen magnum
achondroplasia
* mutation in FGFR3 AD
Complications of achondroplasia
increased risk for SIDS, small foramen magnum-risk of hydrocephalus or c-spine injury, small thorax-risk for pneumonia
Pattern: long fingers, lens dislocation, myopia, high arched palate
Marfan
Management of Marfan
Annual ECHO, ACE inhibitors to prevent aortic dilation, ophthalmologic exam, rule out homocystinuria
- for craniosynostosis
FGFR1, FGFR2, FGFR3, TWIST, MSX1
Syndromes most commonly associated with craniosynostosis
Pfieffer, Cruzon, Apert
Management of craiosynostosis
Referral to craniofacial team, early referral to ophtho, make sure airway isn’t compromised from small midface
small mandible –> cleft palate –> glossoptosis
Pierre-Robin sequence
Small mandible –> cleft palate –> glossoptosis + retinal detachment, myopic, and hearing loss
Pierre-Robin syndrome - Stickler syndrome
Pattern: omaphalocele, crease or pits in ear lobe, large size, neonatal hypoglycemia, macroglossia, umbilical hernia
Beckwith-Wiedemann syndrome
What tumors do Beckwith-Wiedemann syndrome
Wilms, adrenal cortical carcinoma, hepatoblastoma
Pattern: aniridia and intellectual disability, Wilms tumor, gonadoblastoma
Aniridia-WAGR syndrome
Mutation in WAGR-syndrome
Deletion chromosome 11p13
Tumor associated with hemihyperplasia
Wilms, adrenal cortical carcinoma, hepatoblastoma
Management for Beckwith-Wiedemann syndrome, hemihyperplasia, or WAGR
q3 month abdominal US for kidney, adrenals, and liver until age 8, q3 alphafetoprotein until age 4
Evaluation for infant with hearing loss
Audiology, ENT (outer or inner ear), genetics, TORCH testing (CMV), ophtho, EKG (conduction problem)
Pattern: hyperextensibility, atrophic scars, delayed walking
Hypermobile Ehlers Danlos Syndrome
Pattern: hypermobile, spontaneous gut rupture, aneurysm, wound dehicience
Ehlers Danlos Syndrome
What syndromes have radial ray anomalies
TAR, Diamond blackfan anemia, fanconi anemia, holt-oram syndrome, VATER/VACTERL
What evaluation do you for child with radial ray anomalies
chromosome breakage studies
Pattern: absent clavicles, delayed closure of the fontanelle, skeletal dysplasia
cleidocranial dysostosis
Testing for kids suspected of Autism
Fragile X syndrome, microarray
mutations associated with Autism
16p11.2 deletion and 15q11-q13 duplication
X-linked genes associated with autism
Neuroligins NLGN3, NLGN4
Test for FA oxidation dx
plasma acylcarnitines
Test for peroxisomal dx
VLCFA
Test for mucopolysaccharidoses
urine glycosaminoglycan
Pattern: fine first few days of life, then lethargy, tachypnea in the latter half of first week of life
Urea cycle deficit
Pattern: hyperammonemia and alkalosis
urea cycle disorder
Pattern: hyperammonemia and acidosis
organic acidemias
Pattern: hyperammonemia, ketosis, neutropenia, hyperammonemia
organic acidemias
Test for organic acidemias
urine organic acids
Pattern: hyperammonemia and hypoglycemia
FA oxidation dx
Pattern: hyperammonemia and normal anion gap (3-11),
urea cycle disorder
Pattern: hyperammonemia and high anion gap >11
organic acid disorder
Management of hyperammonemia
Administer calories to prevent catabolism, D10 with insulin, urea cycle scavengers (sodium benzoate, phenybutyrate bypass the urea cycle, dialysis in severe cases (>500mmol/L)
Pattern: infant male, low BUN, high urine orotic acid, abnormal plasma aa (low citruliine)
OTCD
Rx for urea cycle disorders
dialysis, scavengers (by pass the urea cycle), blude. long-term treatment insluced protein restriction, special formula and outpt scavenger therapy
Name 3 most common organic acidurias
isolveric, methmalonic, proprionic
Pattern: acidosis, hyperammonemia, pancytopenia, ketosis, MR
organic acidurias
Pattern: sweaty sock smell
isovaleric
May confused with cobalamin deficieincy
methylmalonic acidemia
Biotin is a cofactor for this catabolism
Proprionic acidemia
Ketotic hypoglycemia + increased lactate
glycogen storage disease type 1
Ketotic hypoglycemia + normal lactate
other than GSD1, ketotic hypoglycemia itself or endocrine problems
Ketotic hypoglycemia + hepatomegaly, increased lactate
hereditary fructose intolerance
Ketotic hypoglycemia + reducing substances, liver disease and E. coli sepsis
galactosemia
Nonketotic hypoglycemia + presents after fasting
FAOD
Nonketotic hypoglycemia + hypoglycemia even when feeding normally
hyperinsulinism
Nonketotic hypoglycemia + large macroglossia, umbilical hernia
Beckwith Wiedemann syndrome
Pattern: hepatomegaly, hypoglycemia, cherubic or doll-like facies, growth impairment
Hepatic type glycogen storage
Rx for hepatic type glycogen storage
cornstarch, nocturnal enteral feeding, liver transplant
Pattern: renal disease, bleeding diathesis, lactic acidosis, hyperuricemia, hypertriglyceridemia
Von Gierke glucose 6-phosphatase
Pattern: renal disease, bleeding diathesis, lactic acidosis, hyperuricemia, hypertriglyceridemia, mucosal ulcerations (oral, intestinal, vaginal), and neutropenia
Glycogen storage Ib glucose 6-phosphate transporter
Pattern: hypoglycemia, skeletal myopathy, cardiomyopathy, hyperlipidemia, elevated transaminases
Glycogen storage III cori /Forbes
Pattern: hypoglycemia, severe FTT, progressive cirrhosis
GSD IV
Pattern: muscle pain and cramping, exercise intolerance, progressive weakness, rhabdomyolysis, no lactate with exercise
McArdle V
Pattern: like McArcle, but earlier onset and more severe, compensated hemolytic anemia, exercise intolerance worse after high carb meal
Muscle type glycogen storage Tarui VII
Pattern: hypoketotic hypoglycemia, liver disease, and mild hyperammonemia, may cause sudden death
MCAD FAOD
Pattern: Hypoketotic hypoglycemia, liver disease, sudden death, cardiomyopathy, rhabdomyolysis, retinopathy
LCFA dehydrogenase
Rx for FAOD
fasting avoidance, low fat diet, MCT for LCD, but not for MCAD
Pattern: E. coli sepsis in 7 day old, irritable, lethargic, jaundiced, hypoglycemia, and hepatomegaly, cataracts
Galactosemia
Dx for galactosemia
decrease in GALT activity, increase in galactose 1-phosphate levels
Pattern: hepatomegaly, jaundice, hepatic failure, hypoglycemia, hypophosphatemia, lactic acidosis
hereditary fructose intolerance (fructose 1-phosphate aldolase deficiency)
Pattern: liver failure, coagulopathy, jaundice, renal tubular acidosis, cabbage-like odor
tyrosinemia type 1
Pattern: corneal dystrophy, erosions and ketosis of palms and soles, MR
Tyrosinemia type II, oculocutaneous
Hyperammonemia + acidosis + ketosis
organic acidemia
Hypoglycemia + acidosis - ketosis
Fatty acid oxidative disorder
Hypoglycemia + ketosis + lactic acidosis
GSD or Hereditary fructose intolerance
Very high lactate without hypoxia or other causes
mito, pyruvate dehydrogenase deficiency
Pattern: early macrocephaly and subtle neuro signs, after viral infection has basal ganglia stroke and MR and movement disorder; retinal or subdural hemorrhages and mistaken for child abuse
Glutaric academia type 1
Pattern; acidosis and metabolic decompensation, severe ID, rash and alopecia
biotinidase deficiency, organic acidemia
Pattern: ketosis, possible hypoglycemia, no hyperammonemia or acidosis, poor feeding, apnea, lots of leucine, seizures, death, ataxia or DD
MSUD
Rx for MSUD
thiamine, dialysis to remove leucine, protein restriction
Pattern: abnormal startle, cherry red spot, decrased attentiveness at 3 to 6 months, progressive neuro decline
Tay Sachs
Pattern: Bone and CNS, osteopenia, osteonecrosis, fractures, hepatosplenomegaly, anemia, thrombocytopenia, coagulopathy, pulmonary disease, CNS involvement, swallowing difficulty, nystagmus, seizures
Gaucher
Dx for Gaucher
Leukocyte active, gaucher cells (macrophages)
Pattern: Angiokeratosis, pain crisis in distal extremities, left ventricular hypertrophy, and cardiomyopathy, strokes, proteinuria, and renal disease
X-linked disease
alpha-galactosidase A
Fabry
Glucocerebrosidase deficiency
Gaucher
Leucine toxicity
MSUD
Abnormal lysine and tryptophan
glutaric academia type 1
alpha-glucosidase
Pompe
Pattern: infant with feeding problems, severe weakness, cardiomyopathy, early death
Pompe
Pattern: child with muscle weakness progressing to resp failure in several years
Pompe
Alpha L-iduronidase
Hurler
Pattern: early onset, corneal clouding, die first 10 years
Hurler
Pattern: course facies, no corneal clouding
Hunter
Iduronate sulfatase x-linked
Hunter
Pattern: course facies, brain problems > bone
San Fillipo
Pattern: course facies, skeletal dysplasia
Morquio
Pattern: course facies, normal intelligence, short, joint problems
Maroteaux-Lamy
Pattern: long slender figures, long limbs, pectus, lens go down, thrombosis, strokes
Homocystinuria
Pattern: hypotonia, seizures, liver dysfunction, triangular head
Zellweger
Pattern: microcephaly, broad nasal tip, cataracts, 2-3 toe syndactyly, polydactyly, cleft palate, CHD, autism, MR
Smith-lemli-optiz
Urine glcyosaminoglycans
mucopolysaccharidoses
Plasma acylcarnitine
fatty acid oxidation disorders
Organic acid disorders
urine orgnanic acids
Components of newborn screening
PKU, galactosemia, hypoth, SCD, biotin, hemoglobinopathies, amino acidopathies, organic acidurias, FA osication