Fundamentals of Biochem II Flashcards
What are the two intramolecular forces of attraction?
Ionic and covalent bonds
What are ionic bonds?
- Bonds between oppositely charged atoms (when an anion and cation bond)
- Relatively weaker bonds especially when in solutions
What are covalent bonds?
(More important in bio)
- They arise from the simultaneous attraction of 2 nuclei for a shared pair of electrons; it occurs between 2 non-metals
- Relatively stronger bonds
What is electronegativity?
- The measure of an atom’s ability to attract shared electron pairs
What is En?
- An atoms electronegativity number
- It indicates the strength at which an atom attracts electron pairs
What is △En?
- The electronegativity difference between two atoms
What is polarity?
- When electron pairs are unequally shared
- One atom takes on a partially positive charge (𝛅+), and one takes on a partially negative charge (𝛅-)
What is 𝛅/delta?
- It is used to show a particle or relative charge on one end of a bond
Important note about polarity
There is a difference between polar bonds and polar molecules
The bond is non-polar covalent if….
The △En is zero
The bond is polar covalent if…
The △En is greater then zero but less than 1.7
The bond is polar ionic if…
The △En is greater than 1.7-4.2
What is hybridization?
- The process of overlapping valence electrons
What are non-bonding/lone pairs?
- Electrons which orbit around atoms but do not take place in bonding within a covalent compound
Do non-bonding/lone pairs take up more or less space than bonding pairs? why?
- They take up more space than bonding pairs do
- They end up repelling and compressing bond angles of bonding pairs, this makes the molecules 3D
Why is H2O so important to living things?
- Living things are mostly H20 which is polar, so polar substances pass through the body faster
What are the 3 major types of intermolecular forces?
- London forces
- Dipole-dipole forces
- Hydrogen bonds
London Forces
- Weakest intermolecular forces
- Occurs between all molecules
- A temporary attractive force
- Cause non polar substances to condense to liquids and to freeze into solids when the temperature is lowered enough
How do London forces occur?
- They result from the temporary displacement of the electrons around the atoms
- The strength of London force tends to increase with increasing molecular mass since there are more electrons
Dipole-dipole Forces
- Medium strength forces
- Between polar molecules
- special conditions
How do dipole-dipole forces occur?
- Occurs between molecules that have permanent net dipoles
- The partial positive charge on one molecule is electrostatically attracted to the partial negative charge on a neighbouring molecule
Hydrogen Bonds
- Strongest intermolecular force
- Occurs when Hydrogen bonds with Nitrogen, Oxygen and Fluorine
- special conditions
How do hydrogen bonds occur?
- They occur between molecules that have a permanent net dipole resulting from hydrogen being covalently bonded to either fluorine, oxygen or nitrogen
Factors that affect molecular shape
- electronegativity
- polarity
- hybridization
- nonbonding/lone pairs