Enzymes Flashcards
enzyme definition
protein that catalyzes a biological reaction
not altered or consumed during reaction
- reusable
- accelerate reactions
enzymes
where are enzymes found?
in all body tissue
ex. heart attack = increased cardiac enzymes
clinical benefit of enzymes
helpful in making diagnosis
isoenzyme definition
enzymes that exist in multiple forms, but catalyze the same chemical reaction (same substrate)
how to differentiate isoenzymes
electrophoretic mobility
differences in absorption properties
reactions with specific antibodies
cofactor definition
non-protein molecules required for enzyme activation
cofactor types
Activators, Coenzymes
Common co-factor activators
Ca2+, Fe2+
common coenzymes
ATP, ADP, NAD
EDTA and calcium
some anticoagulants remove cofactors, EDTA removes calcium
Holoenzyme definition
Functional unit consisting of apoenzyme and cofactor
apoenzyme
protein portion of holoenzyme
Proenzyme/zymogen
inactive enzyme that requires biomechanical change to become active
Digestion enzymes
example of proenzyme
Cavity where substrate interacts
active site
site on enzyme where cofactors or regulatory molecules interact
allosteric site
Inhibitor attaches at
allosteric site
Basic enzyme reaction
S+E –> ES –> E+P
describes the nature of the reaction
ex. 1,4-glucagon-4-gluconohydrolase (amylase)
Systemic name
how do enzymes catalyze reactions?
lowering the activation rate
working/practical name
ex. amylase
recommended name
Numerical code
first digit = class second/third digit= subclass fourth digit=specific serial number
Standard abbreviated name
accompanies recommended name
ex. AMS (amylase)
common abbreviated name
ex. AMY (amylase)
enzyme combines with only one substrate and catalyze one reaction
absolute specificity
enzymes combine with all substrates containing particular functional groups
ex. amino, phosphate, methyl groups
Group specificity
act upon certain chemical bonds
act upon certain chemical bonds
act upon specific stereoisomers of substrates.
ex. Glucose oxidase acts on D-glucose
Stereoisomeric specificity
excess energy that raises all molecules at a certain temperature to the activation energy
-determines how fast a reaction will proceed
activation energy
influencing factors on enzymatic reactions
- substrate concentration
- enzyme concentration
- pH
- temperature
- cofactors
- inhibitors
pH and enzymatic reactions
7.0-8.0 pH
changes can denature enzyme
buffer systems used to control pH
Temperature and enzymatic reactions
37 degrees C
increasing temp increases rate of reaction
extreme low/high can denature enzyme
reaction velocity and temperature
doubles for each 10 degree increase until 50 degrees then denaturation occurs
any substance that competes with the substrate for the active/binding sites (reversible)
competitive inhibition
a substance that binds to an allosteric site instead of competing with substrate
noncompetitive inhibition
relationship of the reaction velocity/rate to the substrate concentration
Michaelis-Menten (Km) Curve
Km constant
the substrate concentration in moles/liter when initial velocity is 1/2 V max
first-order kinetics
enzyme concentration is fixed, substrate is varies
rate is directly proportional to substrate concentration
first-order kinetics
method for measuring substrate
glucose
zero-order kinetics
reaction rate depends on enzyme concentration
plateau is reaches: all enzyme bound to substrate
zero-order kinetics
method for measuring enzyme
LD
low Km =
low substrate needed
high Km
more substrate is needed
clinical enzymes
measure activity of enzymes in patient serum
ex. LD, AST
substrate concentration should not be limiting factor (clinical enzymes)
need excess substrate and cofactors to handle possible abnormally high patient enzyme levels
if substrate and coenzyme are in excess, reaction rate is controlled by ENZYME
zero order kinetics in lab
measure amount of substrate in patient serum
analytical enzymes
glucose, cholesterol
analytical enzyme ex
analytical enzymes and kinetic order
first order kinetic
enzymes are not directly measured in lab
enzymes usually present in small quantities in bodily fluids, also difficult to isolate
how labs measure enzymes
-catalytic activity
enzymes activity can be tested by measuring
-increased product
-decreased substrate
-decreased coenzyme
-increased altered coenzyme
NAD+, NADH
leakage from cells (entry of enzymes)
damage to cell membrane
virus/chemical injury
altered production of enzymes
increased synthesis
increased osteoblastic activity
entry of enzymes into blood
leakage from cells
altered production of enzymes
clearance of enzymes
half life varies
increased serum levels of enzymes
cell damage,death
increased production
impaired disposition (jaundice/renal failure)
decreased serum enzymes
decreased formation (genetic or acquired)
enzyme inhibitor
lack of cofactors
measuring enzyme activity
- single step reaction
ex. NAD++Lactate -LD–> pyruvate + NADH
-consecutive enzyme reactions