Drug Receptor Interactions Flashcards
What are receptors ? Also briefly describe their role.
Receptors are specialised, localised proteins whose role it is to recognise stimulants and translate this event into an activation of the cell
Describe the main general properties of interaction between the drug and receptor
- Loose
- Freely reversible
- Does not involve strong chemical bonds
Identify the regulatory protein families which are commonly drug targets and are covered by the term receptor:
- Enzymes
- Carrier molecules (transporters)
- Ion channels
- Neurotransmitter, hormone or local hormone receptors
Is the active site of a receptor specific for one drug only ?
No, may fit more than one chemical substance
How similar are agonists and antagonists, chemically ?
a) Both bind same receptor, so must be chemical similarities
b) One activates the receptor, other does not: Must also be chemical differences
What is the law of mass action ?
“The rate of a chemical reaction is proportional to the product of the concentration of the reactants”
How do forward and backward rates compare at equilibrium ?
They are equal
What happens to the forward and backward rate of a reaction at equilibrium if more reactant is added ?
Forward rate will increase (i.e. be more than the backward rate) until a new eq is reached
When the law of mass of action is applied to pharmacology, what does the following stand for ?
(D) + (R) ⇌ (DR) ⇌ (DR)*
K1 and K2
α and β
What does the first part of the equation stand for ?
What does the second part stand for ?
[D] is the concentration of drug
[R] is the concentration of receptors
[DR] is the concentration of occupied receptors
K1 is the rate constant for associations
K2 is the rate constant for dissociations
α is the rate constant of receptor inactivation
β is the rate constant of receptor activation
First part is occupancy
Second part is activation
What is the formula for rate of associations ?
for rate of dissociations
rate of associations: (K1.[D].[R])
rate of dissociations: (K2.[DR])
What is affinity in the context of pharmacology ?
(KD or KA) is a measure of the concentration range over which a drug binds to its receptor
How may we experimentally determine the affinity of a receptor for a drug ?
- Label the drug
- Incubate the drug at various concentrations, with the receptor
- Allow dynamic equilibrium to be established
- Filtrate bound receptor-drug complex from unbound drugs
- Must take non-specific binding into account (binding in areas other than active site): add unlabelled drug, which will therefore bind to active site. Only signal coming from labeled drugs is from the ones non-specifically bound (gives measure of non-specific binding)
- Subtract non-specific binding from total binding to obtain specific binding
What is the shape of the graph obtained when graphing Quantity of Specifically Bound Drug vs Concentration ?
Hyperbolic
What information does the log scale graph of specifically bound drug vs concentration (log scale) give you ?
Maximum Binding
Affinity
What is the equilibrium dissociation constant ?
KD, concentration of drug required to occupy 50% of the receptors at equilibrium
Is the KD the same for all drugs ?
No
Can you measure affinity for a mixed population of drugs and/or receptors ? Why or why not ?
No, because KD is a measure of the affinity of any one drug for a receptor.
What is fractional occupancy ?
The fraction of all receptors that are bound to ligand.
What is the formula for fractional occupancy ?
Fractional Occupancy = [DR]/totalR = DR/[R]+[DR]
Given the unknowns we have, including the concentration of unoccupied receptor (so cannot determine [DR], so use HILL LANGMUIR equation:
Fractional occupancy = [D] / ([D] + KD)
where,
[D] is the concentration of drug
KD is the equilibrium dissociation constant of the drug
In the theoretical relationship between occupancy and ligand concentration, what would be the shape of the graph using:
- a linear concentration scale
- a log concentration scale
- a linear concentration scale: rectangular hyperbola
- a log concentration scale: symmetrical sigmoid curve
At which value of fractional occupancy is KD found ?
At 50% (because KD is the concentration of drug required to occupy 50% of the receptors at equilibrium)
What is pD2 ? What is its usage ?
pD2 = -log10(KD)
Conventional to express the equilibrium dissociation constant (KD) as -log10 of the KD. This is called the pD2 for an agonist.
Will affinity be larger for an agonist with a higher or lower pD2 ?
Higher (because -log10 of a small number is larger than -log10 of a larger number)