CHEM Spectroscopy and Separations Flashcards
Infrared Spectroscopy
For Functional Groups
Uses radiation w/ a frequency lower than that of visible light to vibrate covalent bonds (must have dipole moment)
1550 - 1650 wavenumber (cm-1)
C=N
1600 - 1680 wavenumber (cm-1)
C=C
1650 - 1780 wavenumber (cm-1)
~1700
C=O
Sharp
2100 - 2260 wavenumber (cm-1)
C≡C
2220 - 2260 wavenumber (cm-1)
C≡N
3200 - 3600 wavenumber (cm-1)
O-H
Broad
3300 - 3500 wavenumber (cm-1)
N-H
Area below 1500 wavenumber (cm-1)
Fingerprint region
NMR Spectroscropy
Nuclear Magnetic Resonance
Characterizes a molecule’s atoms
Left side of NMR
Downfield = DEshielded = close to e- withdrawing groups
Right side of NMR
Upfield = shielded = far from e- withdrawing groups
1-HNMR (proton NMR) area under peak
Corresponds to # of equivalent hydrogens
Splitting
N + 1 Rule
Singlet, doublet, triplet, etc.
is determined by # of hydrogens on adjacent atom
0.9 ppm shift
-CH3
1.0 - 5.5 ppm shift
-CH2OH
2.0 - 3.0 ppm shift
-C≡CH
4.5 - 6.0 ppm shift
-CH=CH-
6.0 - 8.4 ppm shift
Ar (aromatic ring) - H
9.5 ppm shift
-CHO
10.5 - 12.0 ppm shift
-COOH
N+1 rule
For splitting patterns of 1-HNMR
Any peak will be split into a number of smaller peaks equal to the number of adjacent hydrogen atoms plus one
13-CNMR
Most carbon on earth is in 12-C form but 13-C is used because only nuclei with an odd number of proteins have nuclear spin
Ranges from 0 - 200 ppm
Just like 1-HNMR but looking at Carbons
UV-Visible Spec
Useful o discern presence of conjugated/aromatic species
Mass Spec
Helps determine molecular weight (m/z peak; mass to charge ratio peak) of organic compounds
Distillation
Separates liquids based on Boiling Points
Simple Distillation
used for BPs > 25˚ apart
Fractional Distillation
used for BPs < 25˚ apart
Vacuum Distillation
used for very high BPs
used to lower atmospheric pressures in order to lower BPs
Extraction
Separates liquids based on solubility/acid-base properties
Extraction Requires
Immiscible aqueous and organic layers in a sparatory funnel
Extraction: to send an ACID into aqueous layer…
Add base (deprotonate it)
Extraction: to send a BASE into aqueous layer..
Add acid (protonate it)
Chromatogrpahy
Involves a mobile phase and a stationary phase with different properties
TLC (thin-layer)
Rough measure of polarity
Stationary phase = polar silica
Mobile phase = nonpolar solvent
Rf = distance traveled by compound / distance traveled by solvent
Forms of Column Chromatography
Stationary phase = in column
Different analyts will be eluted out at different times and can be collected in separate containers
Size-exclusion Cation-exchange Anion-exchange Affinity Gas HPLC
Gas Chromatography (GC)
Vaporizes a sample and passes through a column, then measures retention time
Stationary phase = liquid
Mobile phase = gaseous (like He)
HPLC (high performance or high pressure liquid chrom)
Rapid method of column chromatography
Stationary phase = polar
Mobile phase = nonpolar
RP-HPLC (reverse process)
Stationary phase = NONpolar
Mobile phase = polar
Other seperation techniques
Recrystallization
Filtration
Paper Chromatography
Mobile phase moves up filter paper via capillary action
Size-Exclusion Chromatogrpahy
Gel beads contain pores and act as molecular sieve that catches up small particles, making them elue more slowly
Ion-Exchange Chrom
Relies on charge interactions
Anion-exchange Chrom
Gel contains cations that trap anions
Anions elute last
Cation-exchange Chrom
Gel contains anions that trap cations
Cations elute last
Affinity Chrom
More specific interactions
Ex: Antibody-Antigen
Electrophoresis
A charge is applied across a gel and molecules migrate due to the applied voltages
Gel Electrophoresis
Also affected by size due to gel filtration properties
SDS-PAGE
This allows proteins to be separated by mass alone
SDS and anionic detergent that results in an even distribution of charge per unit mass
Isoelectric focusing
Uses electrophoresis with a pH gradient to separate proteins by the pI (isoelectric point; the pH where a protein has a net zero charge = zwitterion)
Western blotting
After electrophoresis, an antibody specific to the separated protein of interest is applied and visualized
Enzyme-linked Immunosorbent Assay (ELIZA)
Specific visualizable detection antibodies are used to find antigens