chapter 8 Flashcards

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1
Q

DNA -> DNA

A

replication

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2
Q

DNA -> RNA

A

transcription

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3
Q

RNA -> Protein

A

translation

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4
Q

experiment with radioactive uracil or wtv that proves RNA is the messanger

A

Volkin and Astrachan

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5
Q

what are the key differences in RNA

A

ribose sugar and uracil instead of thymine

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6
Q

mRNA

A

messanger RNA, has the protein encoding sequence

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7
Q

tRNA

A

transfer RNA, carry amino acids to ribosome

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8
Q

rRNA

A

ribosomal RNA, key part of ribosomes

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9
Q

snRNA

A

small nuclear RNAs, participate in mRNA processing

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10
Q

what direction is transcription

A

5’ to 3’

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11
Q

what are the 4 stages of transcription

A

initiation, elongation, termination, and processing for eukary

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12
Q

Prokaryote initiation codeon

A

TTGACAT or TATAAT

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13
Q

sigma factor

A

scans the chromosome and helps unwind the DNA so that RNA polymerase can initiate

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14
Q

differences in prokaryote and eukaryote transcription

A
  • Diff RNA polymerases used
  • Diff initiation and termination mechanisms
  • only eukaryotes do processing
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15
Q

RNA Polymerase I

A

transcribes all rRNA genes except 5S

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16
Q

RNA Polymerase II

A

transcribes all mRNAs and some snRNAs

17
Q

RNA Polymerase III

A

transcribes all tRNAs, some snRNAs and 5S rRNA

18
Q

what is the promoter sequence in eukaryotes

A

TATA box

19
Q

what is TBP (euk)

A

promotor recognizing factor

20
Q

what is GTFs

A

general transcription factors, bind to promotor and attract/position RNA polymerase II

21
Q

elongation

A

nucleotides are added one at a time

22
Q

elongation occurs in which direction

A

5’ to 3’

23
Q

transcription and translation are _____ in euk

A

compartmentalized

24
Q

in prokaryotes translation happens..

A

as mRNA is being produced

25
Q

termination signal in eukaryotes

A

AAUAAA

26
Q

the endonuclease cuts ______ nucleotides downstream of signal so polymerase falls of

A

20

27
Q

GI rich hairpin

A

mediates prokeryote termination

28
Q

processing

A

in eukaryotes only, primary RNA is transcripted into mature mRNAs

29
Q

5’ cap

A

added to the 5’ end of the message as elongation proceeds

30
Q

3’ Poly(A) tail

A

added after termination to precent degradation and signals initiation of transcription

31
Q

splicing

A

cut out introns (non-coding regions), done by splicisome

32
Q

what is the evidence of introns

A

hybridization

33
Q

alternative splicing

A

depending on what’s considered an intron, one gene can lead to many diff proteins

34
Q

splicisome

A

does the splicing at consensus sequences (GU and AG at the 5’ and 3’ splice sites), made of snRNAs