chapter 8 Flashcards
DNA -> DNA
replication
DNA -> RNA
transcription
RNA -> Protein
translation
experiment with radioactive uracil or wtv that proves RNA is the messanger
Volkin and Astrachan
what are the key differences in RNA
ribose sugar and uracil instead of thymine
mRNA
messanger RNA, has the protein encoding sequence
tRNA
transfer RNA, carry amino acids to ribosome
rRNA
ribosomal RNA, key part of ribosomes
snRNA
small nuclear RNAs, participate in mRNA processing
what direction is transcription
5’ to 3’
what are the 4 stages of transcription
initiation, elongation, termination, and processing for eukary
Prokaryote initiation codeon
TTGACAT or TATAAT
sigma factor
scans the chromosome and helps unwind the DNA so that RNA polymerase can initiate
differences in prokaryote and eukaryote transcription
- Diff RNA polymerases used
- Diff initiation and termination mechanisms
- only eukaryotes do processing
RNA Polymerase I
transcribes all rRNA genes except 5S
RNA Polymerase II
transcribes all mRNAs and some snRNAs
RNA Polymerase III
transcribes all tRNAs, some snRNAs and 5S rRNA
what is the promoter sequence in eukaryotes
TATA box
what is TBP (euk)
promotor recognizing factor
what is GTFs
general transcription factors, bind to promotor and attract/position RNA polymerase II
elongation
nucleotides are added one at a time
elongation occurs in which direction
5’ to 3’
transcription and translation are _____ in euk
compartmentalized
in prokaryotes translation happens..
as mRNA is being produced
termination signal in eukaryotes
AAUAAA
the endonuclease cuts ______ nucleotides downstream of signal so polymerase falls of
20
GI rich hairpin
mediates prokeryote termination
processing
in eukaryotes only, primary RNA is transcripted into mature mRNAs
5’ cap
added to the 5’ end of the message as elongation proceeds
3’ Poly(A) tail
added after termination to precent degradation and signals initiation of transcription
splicing
cut out introns (non-coding regions), done by splicisome
what is the evidence of introns
hybridization
alternative splicing
depending on what’s considered an intron, one gene can lead to many diff proteins
splicisome
does the splicing at consensus sequences (GU and AG at the 5’ and 3’ splice sites), made of snRNAs