Chapter 6 Proteins Flashcards
What monomer makes up protein? What is another word for protein?
- amino acids
- polypeptide
What 5 elements do they contain? What elements set it apart from carbs/lipids?
C, H, O, N (some S > disulfide bonds)
what are proteins determined by?
sequence of aa
What are the 10 functions of proteins?
proteins are the most diverse macromolecule
- enzymes
- lower activation energy and speed up chemical reactions - structural
- makeup cell membranes, bones, muscle, ligaments, tendons, hair, nails, skin - transport
- hemoglobin carry O2 in RBC, Na/K pump nutrients across membranes, aquaporins regulate fluid/electrolyte balance - hormonal
- regulate physiological processes (ex insulin)
- can be lipid-based (cholesterol) or protein-based (insulin) - defensive
- antibodies - contractile
- movement (ex actin and myosin) - receptor
- membrane-bound & receive chemical receptors - blood clotting
- gene expression
- regulate formation of other proteins - energy
- dont want this
How many amino acids are there? What are the 9 essential aa? Why are they essential?
20
- Histidine, Isoleucine, leucine, lysine, methionine, phenylalanine, threonine, tryptophan, valine
- cannot be made and need to be consumed
Desribe the structure of an amino acid - 5 components
- central carbon
- amino group (NH2)
- carboxylic acid group (COOH)
- hydrogen
- R group (side chain)
What differentiates amino acids from each other? What is it? What are its properties?
- R group
- chain of C with other elements (N,O,S)
- hydrophobic, hydrophilic, positive, or negative charges
What bonds binds amino acids together? What kind of bond is it? How are they created?
- peptide bond (formed first, then other bonds)
- covalent bond
- bond between carboxyl group of one aa and amine group of another aa
- aa can be 50 to 50k aa in length!
what is a conditionally essential aa
have period in life where non-essential but not making enough during certain periods so have to consume more of it. ex. pregnancy, puberty
What is the central dogma of biology and its process?
DNA > RNA > Protein
Duplication > transcription > translation
What are gene sequences?
specific sequences of DNA that codes for a specific protein
What are the 4 levels of protein structure?
- Primary: linear sequence of aa in order
- Secondary: how primary acids interact with each other
- alpha helix like coils of a spring
- beta-pleated sheets like accordion ribbons
- H bonds, ionic, R group interactions
- more bonds formed as protein grows - Tertiary: secondary structure interacts to form a more compact structure
- some proteins functional at this stage - Quaternary: 2 or more different polypeptides ineteract with each other
Ex. hemaglobin made of 4 different proteins, each non-functional by itself
What can one aa change do to a protein?
- render it inactive
- change in structure = change in function
Ex. sickle cell anemia one aa difference
-glutamate (hydrophilic) replaces valine (hydrophobic)
What is insulin so important to study as a protein? How many aa does it have? What is its structure? What disease is caused without it?
- first protein to be sequenced
- composed of 51 aa
- quaternary structure with 2 chains
- absence results in diabetes mellitus
Fibrous vs Globular proteins
What is its shape, solubility in water, and stability? What is the function of a fibrous protein? What do globular proteins have? What tissues are fibrous proteins found in? What are some specific examples of both?
What 2 proteins cross the boundary of both types of proteins?
Fibrous (structural)
-strand-like
-water-insoluble
-stable
-provide mechanical support and tensile strength
-components of skin, CT, blood vessel walls, parts of the eye
Ex. keratin (skin, hair, nails), elastin, collagen (most abundant protein in body), SOME contractile fibers
Globular (functional)
-compact
-spherical
-water-soluble
-sensitive to environmental changes
-specific functional regions (active sites)
Ex. antibodies, hormones, molecular chaperones, enzymes
Actin/myosin crosses boundary of both classes