Biological molecules 1: Proteins Flashcards

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1
Q

What are proteins

A

Proteins are biological molecules made up by one or more polypeptides joined together a series of peptide bonds through condensation reactions

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2
Q

What is the monomer of a protein

A

Amino acids

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3
Q

What is a dipeptide

A

Two amino acids joined together by a peptide bond through a condensation reaction

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4
Q

What are polypeptides

A

Polypeptides are two or more amino acids joined together by peptide bonds through condensation reactions

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5
Q

How many variations amino acids are there

A

20

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6
Q

What are the differences bettween the amino acids

A

Their R groups

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7
Q

What bonds occur between the formation of dipeptides and polypeptides

A

Peptide bonds

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8
Q

What groups on the amino acids does bonding occur between

A

An amine group on one amino acid and a carboxyl group of another

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9
Q

What is the primary structure of a protein

A

The sequencing of amino acids in a polypeptide chain

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10
Q

What is the secondary structure of a protein

A

The coiling and folding of the polypeptide chain based on the sequencing of amino acids

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11
Q

What forms during the secondary structure

A

Alpha (α) helices
Beta (β) pleated sheets

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12
Q

What is the tertiary structure of a protein

A

The further coiling and folding of a polypeptide chain causing a 3D structure held together by different interactions between R groups of amino acids

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13
Q

What is the quaternary structure of a protein

A

The structure formed when two or more polypeptide chains joined together

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14
Q

What are the two main 3D structures that occur during the tertiary structure

A

Fibrous structure
Globular structure

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15
Q

When do hydrogen bonds occur during the tertiary structure

A

They occur when their are different attractions between negative and positive charges of different parts of the molecule

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16
Q

When do disulphide bridges occur during the tertiary structure

A

They occur when two cysteine are close together and a sulphur atom in one cysteine bonds with a sulphur on another - causing a double bond between them

17
Q

What do the ionic bonds form between in the tertiary structure

A

They form between the opposite attraction of the negative and positive charges of the R groups on amino acids

18
Q

What structures do globular proteins form

A

Round and spherical structures

19
Q

What structures do fibrous proteins form

A

Long and narrow structures

20
Q

What is the structure of an enzyme and how does it help with its function

A

Globular structure - Folded in a way where it has the correct orientation and active site as it’s substrate so can form enzyme substrate complexes

21
Q

What structure do antibodies have and how does it help its function

A

Globular structure - Easy to transport meaning they can get to antigens quickly

22
Q

What structure do transport proteins have and how does it help its function

A

Globular structure - Contains both hydrophobic and hydrophilic amino acids causing protein to fold up into a channel

23
Q

What structure do structural proteins have and how does it help its function

A

Fibrous structure - Long polypeptide chain lay parallel to each other with cross links between them making them very strong

24
Q

What shape are fibrous proteins

A

Long and narrow

25
Q

What shape are globular proteins

A

Round and spherical

26
Q

What function do fibrous proteins have

A

Structural

27
Q

What function do globular proteins have

A

Functional

28
Q

What causes fibrous proteins to have a long and narrow shape

A

Their amino sequencing is repetitive

29
Q

What causes globular proteins to have a round and spherical shape

A

Irregular amino acid sequencing

30
Q

Examples of fibrous proteins

A

Collagen and Keratin

31
Q

Examples of globular proteins

A

Enzymes and haemoglobin

32
Q

What is glycine

A

An amino acid with an R group only containing a hydrogen

33
Q

What binds are present in the tertiary of a protein

A
  • Ionic bonds
  • Disulphide bridges
  • Hydrogen bonds