biochem exam 3 Flashcards
what are the three factors that control metabolic homeostasis?
blood level of nutrient
hormone levels
nerve impulse (direct or via hormone release)
what is epinephrine also known as?
adrenaline
what are the insulin counter-regulatory hormones?
glucagon, epinephrine (norepinephrine), and cortisol
what kind of hormone is insulin? what is its function?
an anabolic hormone
fuel storage, growth, and protein synthesis
what makes skeletal muscle special in response to glucagon?
it is not affected by glucagon because it doesn’t have glucagon receptors
where is insulin synthesized and secreted?
from beta cells of the pancreas and is synthesized a preproinsulin
explain the significance of c peptide in insulin?
c peptide connects the a-chain to the b-chain of preproinsulin and is later cleaved. insulin is rapidly removed from the blood but c-peptide is not. c peptide is used to measure an estimate of pancreatic insulin secretion
what does Glipizide do?
it is used to treat type II diabetes by closing the ATP dependent K+ channel leading to release of insulin
where is glucagon synthesized?
in the alpha cells of the pancreas as preproglucagon
what are the 4 methods of hormonal regulation?
- change substrate concentrations
- covalent, reversible modifications to enzyme structure
- change concentrations of allosteric regulators
these are fast
slow = change the expression level or degradation rate of the regulatory enzymes
what does NADPH do?
it is responsible for biosynthesis and detoxification
what does ribose 5-phosphate do?
it is responsible for nucleotide synthesis
what are the products of oxidative PPP?
G6P is oxidized (by G6PD)–> produces 2 NADPH, Co2, and ribulose 5-phosphate
NADPH can be used for FA synthesis, glutathione reduction (regenerate GSH), and others (like detoxification)
what happens in the nonoxidative phase?
5C sugar derivatives of ribulose 5-phosphate (xylulose 5-phosphate and ribose 5-phosphate) are used to generate glycolytic intermediates like F6P and GAP
how many NADPH are produced from 1 G6P?
2
why is the oxidative phase important?
it is the key pathway for generating NADPH in ALL cells and ONLY pathway for generating NADPH for cells that lack mitochondria or O2 (like RBCs)
explain the oxidative phase pathway
G6P is converted to 6-phosphoglucono-delta-lactone via G6PDH and produces NADPH + H+ using NADP+
6-phosphoglucono-delta-lactone –> 6-phosphogluconate via glucolactonase (addition of H2O and makes H+) –> RIBULOSE 5-PHOSPHATE via 6-phosphogluconate DH (usses NADP+ to make NADPH and CO2)
what is a respiratory burst?
response to infectious agents and other stimuli where phagocytic cells (like neutrophils) generate free radicals to destroy invading pathogens
process uses lots of NADPH and O2
explain the respiratory burst process
uses O2 and NADPH via NADPH oxidase to make NADP+ and O2- which can be generated into H2O2 –> addition of Cl- can make HOCl while addition of Fe2+ will make Fe3+ and OH radical
ONOO- (with NO)
All these destroy the pathogen
what happens when G6PDH is deficient?
cell has decreased ability to generate NADPH
RBC mostly affected because it will become susceptible to oxidative damage
how does ribulose 5-phosphate convert to its 5C sugar derivatives?
isomerized to ribose 5-phosphate (used for nucleotide synthesis or nonoxidative phase)
epimerized to xylulose 5-phosphate (used in nonoxidative phase and KEY REGULATOR of gene transcription –> promoting lipogenesis)
what is special about nonoxidative reactions?
they are reversible
what is significant about the carbons in the nonoxidative phase?
they undergo carbon shuffling between the 5C derivates to make F6P or GAP
what happens when nucleotides are needed and no NADPH is needed?
use GLYCOLYSIS to make F6P and GAP then run the NONOXIDATIVE phase backwards
G6P –> F6P –> F1,6BP –> DHAP and GAP
F6P and GAP –> ribose 5-phosphate
what happens when NADPH and nucleotide needs are balanced?
run OXIDATIVE phase and ISOMERASE
G6P (using 2 NADP+ to generate 2 NADPH and 2 CO2) –> ribulose 5-phospate (isomerase) –> ribose 5-phosphate
what happens when you need more NADPH than nucleotides?
run OXIDATIVE and NONOXIDATIVE phases, use F6P and GAP to generate more G6P for OXIDATIVE phase
G6P (2NADP+) –> ribulose 5-phosphate (isomerase) –> ribose 5-phosphate –> F6P and GAP
GAP –> F1,6BP –> F6P –> generate more G6P
what happens when you need NADPH and ATP?
run OXIDATIVE and NONOXIDATIVE phase, using the NONXOIDATIVE phase products for glycolysis
G6P (2 NADP+) –> ribulose 5-phosphase (isomerase) –> ribose 5-phosphate –> F6P and GAP
F6P –> F1,6BP –> DHAP or GAP …–> 2 ATP and pyruvate
GAP …–> 2 ATP and pyruvate
what inhibits G6PDH?
NADPH (feedback inhibition)
what causes the oxidative phase to run?
when [NADPH] is low and [NADP+] is high (feedback regulation)
how is the nonoxidative phase regulated?
because it is reversible, it is regulated by cellular concentrations of the pathway intermediates
what are the enzymes involved in the nonoxidative phase?
isomerase (like ribose), epimerase (like xylulose), and transaldolases and transketolases
what is special about transketolases?
they use TTP
thiamin deficiency is detected by measuring transaldolase and transketolase activities in RBC (activities are low –> can be increased by the addition of TTP = thiamine deficiency)
what is NANA also know as?
Sialic acid
what residue does type A blood group have?
GalNAc residue
what residue does type B blood group have?
Gal residue
what are gangliosidoses (sphinoglipidoses)
group of lysozomal storage disease resulting from defects in the degradation of gangliosides
how are gangliosidoses inherited?
autosomal recessive pattern and most present with neurological degeneration
usually fatal before early childhood (EXCEPTION of Gaucher disease)
what is Tay-Sachs disease?
beta-HeXosaminidase A deficiency (accumulation of gangliosides - GM2)
infantile onset with RAPID progression of neurodegeneration and blindness, CHERRY SPOT on macula
tA-saX
what is the Niemann-Pick disease?
accumulation of sphingomyelin (deficiency in sphingomyelinase)
infantile onset RAPID progression of neurodegeneration, CHERRY SPOT on macula, AND HEPATOSPLENOMEGALY
what is Gaucher disease?
beta-glucosidase deficiency
- commonly lysosomal storage disease, onset at any age (generally after childhood), NO NEURODEGENERATION, bone involvement (weakness with PATHOLOGIC FRACTURES and bone pain), HEPATOSPLENOMEGALY
GLUCOCEREBROSIDES accumulate in macrophages of liver, spleen, and bone
WRINKLED TISSUE PAPER
what are amino sugars synthesized from?
F6P which reacts with GLUTAMINE to form glucosamine 6-P and glutamate
what is I-cell disease?
Condition which PHOSPHORYLTRANSFERASE that makes MANNOSE-P is deficient –> mannose-P will NOT go to lysosome to be degraded and will instead be dumped into the cell and cause damage
lysosomal hydrolases are secreted from cell and INCLUSION BODIES FORM in lysosomes
what is the function of colipase?
facilitates the binding of TAG to the lipase active site
to catalyze digestion of triglycerides in the small intestine
what is the function of pancreatic lipase?
along with colipase, they catalyze digestion of TGs in SMALL INTESTINE
it hydrolyzes fatty acids from carbons 1 and 3 of TAG glycerol backbone (TAG–>DAG–>MAG)
how is cholesterol hydrolyzed?
dietary cholesterol comes in the form of cholesterol ester which MUST be hydrolyzed by cholesterol esterase
hydrolysis via cholesterol esterase for INTESTINAL ABSORPTION
what is significant about glycogen phosphorylase?
it catalyzes the PHOSPHOROLYSIS of glucose residues from NONREDUCING ends of the particle –> produces G1P
how are glycerophospholipids hydrolyzed?
hydrolyzed to form a free fatty acid chain and LYSOPHOSPHOLIPID using phospholipase A2
what happens to bile salts in lower concentrations?
they are water-soluble
what happens to bile salts at higher concentrations?
they are micelles
what is the critical micellar concentration (CMC) for bile salts?
5-15 mM
when are bile salts effective?
when the pH is higher than 4, bile salts will be deprotonated = effective emulsifiers
what happens when bile salts cannot efficiently emulsify dietary fats?
- decreased absorption of dietary fat
- decrease absorption of fat-soluble vitamins
- steatorrhea
what differs between chylomicrons and VLDL?
chylomicrons contain apoprotein B-48 while VLDL contain apoprotein B-100
where are TAGs and apoproteins synthesized?
TAGs are synthesized in the SER
apoproteins are synthesized in the RER
come together in the Golgi complex and then secreted into the lymph
enter circulation at thoracic duct
process takes about 1-2 hours
what does the formation of chylomicrons (in intestinal endothelial cells) and VLDL (in hepatocytes) depend on?
microsomal triglyceride transfer protein (MTP)
before leaving the ER, Apo48 and Apo100 have to associate with small amounts of lipids which is facilitated by MTP
deficiency in MTP leads to abetaliproteinemia
what does a deficiency in MTP cause?
abetalipoproteinemia (lack of beta lipoproteins in the blood)
can cause fat malabsorption, stearrohea, inability to absorb fat-soluble vitamins, inability to make FA storage in adipocytes and myocytes (impair gluconeogenesis) –> weight loss and less access to fat
treatment = low fat diet and supplements (fat-soluble vitamins = KADE, and essential fatty acids = a-linolenic acid, linoleic acid for plants and EPA and DHA for animals)
what is the function of ApoCII?
it activates lipoprotein lipase (LPL) which hydrolyzes chylomicron TAGS to 3 FA chains and glycerol so they can enter adipocytes and myocytes
deficiency in ApoCII will lead to elevated TG serum levels, chylomicron accumulation, and pancreatitis
attached to mature chylomicrons along with ApoE
where are mature chylomicrons attached?
to the luminal surface of capillary walls
where LPL is located
describe the order of chylomicron maturation
nascent chylomicron –> mature chylomicron –> chylomicron remnants
what is the function of metformin?
it inhibits complex I of ETC causing build-up of NADH –> unable to make ATP leading to decrease in ATP which activates pyruvate kinase and PFKL activity (liver isoform of PFK-1) –> AMP builds up and activates PFKL activity and inhibits FBP1 activity –> increases AMPK activation which improves glucose transport
inhibit gluconeogenesis
what is glifozins?
SGLT2 inhibitors
reduce glucose reabsorption in the kidney which leads to increase glucose excretion in urine and lowering blood glucose levels
what does bilirubin need to be bound to?
serum albumin –> transported to liver where it is conjugated with TWO glucuronates
it is also a DEGRADATION PRODUCT OF HEME
what is the cause of infantile jaundice?
low activity of HEPATIC BILIRUBIN GLUCURONYLTRANFERASE at birth
what are the two subunits of lactase synthase?
galactosyltransferase and alpha-lactalbumin