Application of molecular techniques in genetics Flashcards
In MolBio, when we speak of genetics, we are specifically
dealing with______
Human Chromosome
Refers to the complete set
of the chromosomes in the cells of the organism.
- Studying the human chromosome will be based on its____
Karyotype or karyotyping
- Early development of this technique uses Radiolabeled
probes as the target label. - Because of the harmful effect of using radioactive agents, fluorescence probes are used.
IN SITU HYBRIDIZATION (ISH)
- used for the labeled gene or target that is in the reagent.
- tagging technique on how we add the
probe in the sample.
Nick Translation
used to replace some nucleotides
of DNA sequences
DNA POL I
stage of the cell is arrested.
- o Advantage: Cell culture is not required in interphase FISH, which is commonly used in he study of the prenatal samples, tumors, and
hematological malignancies.
o Much rapid diagnosis
Interphase FISH
o Designed to mark the entire chromosome of interest.
- useful for deciphering cytogenetic aberrations that are difficult to resolve on morphological grounds, such as
marker chromosomes of uncertain nature or complex changes.
o Uses many probes from a single chromosome and based on that single chromosome, there are lots of unique DNA associated with it.
o Advantage: one of the best assay for looking for any rearrangement in the chromosome.
WCP (Whole Chromosome Painting)
- Combines binary ratio labeling and
color-changing karyotyping.
o Much more automated in the sense that it uses a computer-assisted system.
o Profile is already fixed in the system, and it will just be compared.
o One chromosomal change is detected at a
time
MFISH (Multicolor- FISH)
o Main Advantage: observe multiple
chromosomal aberrations/changes.
SKY (Spectral Karyotyping)
o Uses a telomere probe which will recognize six base repeats which are present at the ends of all chromosomes.
o Advantage: Used as a confirmatory assay
because it can confirm the presence as well as
the absence of telomeric regions.
ALL-TELOMERE-FISH
o Compare the DNA content of differentially
labeled normal from abnormal cell population To identify if there is a change on the said
chromosome.
Comparative Genomic Hybridization
MAIN APPLICATION OF FISH
- DIAGNOSIS
- PROGNOSIS
- EVALUATE REMISSION OF DISEASE
Inherited diseases or Mutations
Diagnosis
- If there is a presence or absence of mutated gene
Prognosis
Repeated condition
- Evaluate Remission of Disease