Animal Replication Flashcards

1
Q

tropism

A

specificity of a virus to a particular tissue/cell type

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2
Q

Animal Virus Entry

fusion

A

some enveloped viruses leave their envelopes at the host cell membrane during entry or at the endosome following receptor mediated endocytosis

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3
Q

Animal Virus Entry

receptor mediated endocytosis

A

membrane invagination pulls the virus into the cell in an endosome

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4
Q

Animal Virus Entry

uncoating

A

process of removing the nucleocapsid can occur due to enzymes/pH changes in the endosome or following the escape from the endosome

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5
Q

Animal Virus Release: Budding and lysis

host cell lysis

A

viral proteins puncture the host plasma membrane

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6
Q

Animal Virus Release: Budding and lysis

budding

A

often occurs at the same time as envelope formation

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7
Q

Double-Stranded (ds) DNA virus synthesis

tegument

A

layer of proteins between nucleocapsid and envelope

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8
Q

Double-Stranded (ds) DNA virus synthesis

productive infection

A

lyse cell releasing 50,000 - 200,000 virions

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9
Q

Double-Stranded (ds) DNA virus synthesis

latent infection

A
  • virions are undetected can be reactivated after months/years
  • different than a chronic infection
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10
Q

Double-Stranded (ds) DNA virus synthesis

chronic infection

A

a slow increase in viral load

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11
Q

Understanding RNA Viruses

Sense (+) RNA strands

A

can be used as mRNA

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12
Q

Understanding RNA Viruses

Anti-Sense (-) RNA strands

A

must be transcribed into sense (+) RNA prior to translation, serve as the template for sense (+) synthesis

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13
Q

Understanding RNA Viruses

RNA-dependent RNA polymerase

A

almost all RNA viruses (except retroviruses) require a virally encoded enzyme to transcribe and replicate RNA

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14
Q

Understanding RNA Viruses

replicase

A

RdRp that replicates a viral RNA genome (more error prone than DdDp)

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15
Q

Understanding RNA Viruses

transcriptase

A

an RdRp that synthesizes mRNA

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16
Q

Sense (+) RNA Virus Synthesis

nonstructural proteins (NSP)

A

include enzymes for viral processes

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17
Q

Sense (+) RNA Virus Synthesis

structural proteins (SP)

A

include spike proteins

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18
Q

Sense (+) RNA Virus Synthesis

accessory proteins (AP)

A

involved in interfering with cellular processes and the innate immune response

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19
Q

Sense (+) RNA Virus Synthesis

spike glycoprotein

A

associates with the ACE2 receptor and is cleaved to induce fusion

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20
Q

Antisense (-) RNA Virus Synthesis

hemagluttinin spikes (HA)

A

attaches to sialic acid moieties linked to glycoproteins and glycolipids on cells in teh respiratory epithelium

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21
Q

Antisense (-) RNA Virus Synthesis

neuraminidase spike (NA)

A

facilitates induction of receptor mediated endocytoosis and separation of the virus from the host cell during budding

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22
Q

Retrosviruses

reversetranscriptase (RT)

A
  • converts ssRNA into dsDNA
  • functions as RpDp, DdDp, and a ribonuclease
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23
Q

Retroviruses

integrase

A

inserts viral dsDNA into the host chromosome

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24
Q

dsDNA Virus

Location of Nucleic Acid Synthesis.

A

nucleus

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25
# dsDNA Virus Steps of viral nucleic acid synthesis.
dsDNA --> dsDNA
26
# dsDNA Virus Steps of viral protein synthesis.
dsDNA --> mRNA --> protein
27
# dsDNA Virus Special viral enzymes involved.
N/A (usually)
28
# dsRNA Virus Location of nucleic acid synthesis.
cytoplasm
29
# dsRNA Virus Steps of viral nucleic acid synthesis.
dsRNA --> ssRNA --> dsRNA
30
# dsRNA Virus Steps of viral protein synthesis.
dsRNA --> mRNA --> protein
31
# dsRNA Virus Special viral enzymes involved.
RNA-dependent RNA polymerase (RdRp)
32
# +ssRNA Virus Location of nucleic acid synthesis.
cytoplasm
33
# +ssRNA Virus Steps in viral nucleic acid synthesis.
+RNA --> -RNA --> +RNA
34
# +ssRNA Virus Steps of viral protein synthesis.
+RNA --> Protein +RNA --> -RNA --> +RNA --> Protein
35
# +ssRNA Virus Special viral enzymes involved.
RNA-dependent RNA polymerase (RdRp)
36
# -ssRNA Virus Location of nucleic acid synthesis
cytoplasm - influenza goes into the nucleus
37
# -ssRNA Virus Steps of viral nucleic acid synthesis.
-RNA --> +RNA --> -RNA
38
# -ssRNA Virus Steps of viral protein synthesis.
-RNA --> mRNA --> protein
39
# -ssRNA Virus Special viral enzymes involved.
RNA-dependent RNA polymerase (RdRp)
40
# Retrovirus Location of nucleic acid synthesis.
RNA --> DNA = cytoplasm DNA integration = nucleus
41
# Retrovirus Steps of viral nucleic acid synthesis.
+RNA --> ssDNA --> dsDNA --> +RNA
42
# Retrovirus Steps of viral protein synthesis.
DNA --> mRNA --> protein
43
# Retrovirus Special viral enzymes involved.
- reverse transcriptase - integrase
44
# Detrimental Outcomes of Viral Infection in Animals cytocidal infection
disease in which some of the symptoms result from cell death
45
# Detrimental Outcomes of Viral Infection in Animals persistent/chronic infection
the cell is not lysed but instead remains a viral factory
46
# Detrimental Outcomes of Viral Infection in Animals cytopathic effects (CPEs)
micorscopic or macroscopic changes or abnormalities in host cells and tissues that are distinct from lyses
47
# Detrimental Outcomes of Viral Infection in Animals latency
viral genomes can be maintained in cells without virion production as proviruses or extrachromasomal elements
48
# Detrimental Outcomes of Viral Infection in Animals oncogenic
capable of inducing cancer
49
# Detrimental Outcomes of Viral Infection in Animals cytokines
soluble, low molecular weight protein or glycoprotein that acts as an intercellular signaling molecule
50
# Detrimental Outcomes of Viral Infection in Animals cytokine storms
proinflammatory cytokines cause dilation of blood vessels that cause a rapid drop on blood pressure leading to shock
51
# How Do We Fight Viral Infections? innate immunity
parts of the immune response that: - has no memory - is non-specific - doesn't improve due to previous infection
52
# How Do We Fight Viral Infections?: Innate Immunity complement proteins
can surround viruses in a process called opsonization promoting phagocytosis and disrupt viral enzymes
53
# How Do We Fight Viral Infections?: Innate Immunity Natural Killer (NK) cells
destroy virally infected cells by inducing apoptosis - looks for absence of MHC I self-recognition signal on cells
54
# How Do We Fight Viral Infections?: Innate Immunity Interferons
cytokines produced by infected cells which induce expression of anti-viral pathways in neighboring cells
55
# How Do We Fight Viral Infections? adaptive immunity
parts of the immune response that: - are specific to a particular pathogen - induce memory response - improve due to previous infection
56
# How Do We Fight Viral Infections?: Adaptive Immunity neutralizing antibodies
proteins that bind to antigens, can block attachment of a virus to host cells and tag the cirus for destruction by phagocytes
57
# How Do We Fight Viral Infections?: Adaptive Immunity cytotoxic T cells
interact with MHC I self recognition signals to 'check' cellular trash for signs of abnormalities, inducing apoptosis in infected and cancerous cells
58
# How Do We Fight Viral Infections? neuraminidase inhibitors
treat influeanze by inhibiting the enzymatic activity of NA spikes, which aid in envelop separation
59
# How Do We Fight Viral Infections? nucleoside or mononucleotide analogues
inhibit DNA viruses which use their own enzyme to phosphorylate nucleotides
60
# How Do We Fight Viral Infections? Nucleoside reverse transcriptase inhibitors (NRTIs)
inhibit retroviruses through incorporation into DNA during reverse transcriptase which halts synthesis
61
# How Do We Fight Viral Infections? Nonnucleotide reverse transcriptase inhibitors (NNRTIs)
prevent DNA synthesis by binding to and inhibiting reverse transcriptase
62
# How Do We Fight Viral Infections? protease inhibitors
block HIV protease which is required for viral protein production
63
# How Do We Fight Viral Infections? integrase inhibitors
inhibit DNA incorporation into genome
64
# How Do We Fight Viral Infections? fusion inhibitors
prevent entry