Amino Acids Flashcards

1
Q

What are proteins?

A

polymers of amino acids.

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2
Q

Polymers are ______

A

molecules that consist of repeating subunits

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3
Q

What does hemoglobin do?

A

transports oxygen in blood cells

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4
Q

What does myoglobin do?

A

stores oxygen in muscle

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5
Q

What is collagen?

A

forms fibers in a supporting matrix for connective tissue. . gives strength and flexibility

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6
Q

What does amelogenin do?

A

organizes the formation of mineral crystals in enamel

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7
Q

What does keratin do?

A

forms fibers that provide strength for skin

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8
Q

What does dextransucrase do?

A

catalyzes formation of dextran, a component of dental plaque

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9
Q

Dextransucrase is an enzyme T/F

A

True

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10
Q

What is the common structure of an amino acid?

A

amino group, carboxylic acid group, side chain, and H.

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11
Q

Proline is an exception because?

A

it has an imino group (NH not NH2) an imino acid

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12
Q

What does chiral mean? Which is the only non chiral amino acid?

A

mirror image/non-superimposable) Glycine** exception (2 H attachments

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13
Q

Which type of amino acids are in proteins?

A

L Amino Acids

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14
Q

How does a zwitter ion form?

A
  • Acid RELEASES H ion in water (dissociate protons)-COOH group
  • Base ACCEPTS H ion in water (pick up protons and become positive)-amino group
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15
Q

What form is amino acid at ph=7? where is this found?

A

zwitter ion form, the environment of a cell

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16
Q

What are the non polar aliphatic amino acids?

A

alanine, valine, leucine, isoleucine

17
Q

What are the non polar aromatic amino acids?

A

phenylalanine, tryptophan

18
Q

Characterize Proline

A

imino acid, non polar

19
Q

Characterize methionine

A

non polar, sulfur containing

20
Q

Characterize glycine

A

non polar, chiral

21
Q

characterize cysteine

A

non polar, sulfar containing

22
Q

How do disulfide bonds form? what is their purpose?

A

2 cysteine side chains, can stabilize a protein

23
Q

What is cystine?

A

when 2 cysteine side chains come together and covalently bond between the S’s

24
Q

Aspartic Acid and Glutamic Acid are ____

A

acidic, polar amino acids

25
Q

What are the basic, polar amino acids? Which most, least basic?

A

lysine, arginine, histidine

arginine-most, histidine-least

26
Q

Asparagine and glutamine are _____

A

uncharged, polar, aliphatic amides

27
Q

What are the aliphatic hydroxyls? How are they classified?

A

serine, threonine, ; uncharged, polar

28
Q

T/F Aliphatic hydroxyls can be phosphorylated

A

True

29
Q

Which is the aromatic hydroxyl? how is it classified?

A

tyrosine; uncharged, polar

30
Q

Proline is found in ____

A

collagen

31
Q

What is a cofactor for hydroxalation of proline? If not properly hydroxylated what do you get?

A

Vitamin C. Scurvy

32
Q

Vitamin K is a cofactor for what? What is this used for?

A

carboxylating glutamic acid. blood clotting (prothrombin)

33
Q

What else gets hydroxylated by vitamin c?

A

lysine

34
Q

Which amino acids are phosphorylated?

A

threonine, tyrosine, serine

35
Q

What are the structure breaking amino acids? Why are they able to do this?

A

Glycine-small and lots of brownian motion.

Proline-bulky and inconsistent with protein conformations

36
Q

BPG reduces ____ of hemoglobin for _____

A

affinity, oxygen (releases more O2)