Amino Acid Metabolism Flashcards

1
Q

amino acids are the _____ of proteins

A

building blocks

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2
Q

some amino acids are converted into _______

A

acetyl-CoA

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3
Q

What is nitrogen fixation

A

conversion of N2 to NH3 or NH4+

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4
Q

how to leguminous plants incorporate nitrogen

A

from bacerially synthesized amino acids into their won

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5
Q

how to nonleguminous plants inorcporoate NH4+

A

NH4 produced by nitrogen fixing soil bacteria directly into amino acids via nitrogen assimilation

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6
Q

What are the two other nitrogen fixation processes that exist in the biosphere

A

industrial (the haber process) and atmospheric (lightning)

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7
Q

most often, NH4+ is incorporated into the amino acids ____ and ____

A

glutamate and glutamine

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8
Q

What are the key enzymes in nitrogen fixation and assimilation

A

nitrogenase complex, glutamine synthease, glutamate synthase, glutamate dehydrogenase

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9
Q

What does hte nitrogenase complex do

A

uses redox reaction and ATP hydrolysis to convert N2 and 2NH3 and six redox reactions

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10
Q

What does glutamine synthease do

A

found in all organisms, incorporates NH4 into glutamate to form glutamine in ATP-redox reaction

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11
Q

What does glutamate synthase do

A

found in bacteria works with glutamine synthease to replenish glutamate

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12
Q

what does glutamate dehydrogenase do

A

inconverts glutamate, NH4 and alpha-ketoglutarate using redox reactions

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13
Q

how many redox centers in the nitrogenous complex

A

six

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14
Q

which amino acids in infected plant cells are synthesized

A

Glu and Asp

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15
Q

What is the intermediate in the glutamate synthease reaction

A

y-glutamyl phoshpate

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16
Q

T or F: glutamate synthease reaction requrires ATP hydrolysis

A

T

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17
Q

What does NH4 assimilation require

A

glutamine synthease and lgutamate synthase

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18
Q

When can the glutamate dehydrogenase reaction assimilate NH4

A

when NH4 concentration are very high

19
Q

degredation of eukaryotic cellular protein is mediated by _____ and ____

A

lysosomes nad proteases

20
Q

How to lysosomes degrade proteins

A

contain acidic proteases that digest protein particles delivered by phagocytosis

21
Q

how to proteases degrade proteins

A

using three different protease activities located within the central core

22
Q

what is nitrogen used for in mammals

A

for urea or biosynthetic pathways

23
Q

what happens to the remaining carbon skeletons in mammals

A

metabolized to create ATP, glucose, fatty acids or ketone bodies

24
Q

amino acids transported to the liver use nitrogen to make _____

A

urea

25
Q

what does the alanine glucose cycle to for cells

A

removes excess nitrogen from muscles, using alanine as the carrier

26
Q

The urea cycle consists of ___ enzymatic reactions

A

5

27
Q

How many of the enzymatic reactions in the urea cycle occur in the cytosol

A

3/5

28
Q

where is the carbon in urea dervied from

A

HCO3- from citrate cycle

29
Q

What is the aspartate-arginosuccinate shunt

A

connects urea and the citrate cycle

30
Q

what connects urea and the citrate cycle

A

fumarate is used to make aspartate in the mitochondrial matrix

31
Q

what are gluconeogenic amino acids

A

have carbon skeletons that can be used to synthesize glucose

32
Q

what are ketogenic amino acids

A

give rise to acetyl-CoA and acetoacetyl-CoA which are precursors to keton bodies

33
Q

what is the difference between essential and nonessential amino acids

A

essential amino acids are more complex and take a greater number of enzymatic steps to synthesize

34
Q

what is the herbicide glycophosphate

A

blocks amino acid synthesis in plants by inhibiting the activity of EPSP synthase

35
Q

GLycophosphate is an _______ inhibitor of phophoeonol pyruvate

A

competitive

36
Q

what are hemes

A

hemoglobin and cytochromes

37
Q

what are nucleotides

A

purines and pyridimines

38
Q

what are signaling molecules

A

neurotransmitters, hormones and nitric oxide

39
Q

What is glycine

A

contributes the four nitrogen atoms to heme in a series of reactions that take place in both the matrix and cytosol

40
Q

What does tyrosine do

A

is the metabolic precursor to dopamine, norepinephrine and epinephrine

41
Q

What is tetrahydrobiopterin

A

key redox cofactor in a variety of amino acid metabolic pathways

42
Q

what does nitric oxide synthase do

A

uses a two step reaction to generate the vasodialator nitric oxide from arganine using O2 and NADPH

43
Q

nitric oxide leads to the relaxation of what

A

smooth muscle cells and blood vessel dialation

44
Q

nitroglycerin is what?

A

used to treat angina cause by vasoconstriction of cardiac blood vessels