A2.1 origin of cells Flashcards

(69 cards)

1
Q

3 statements of basis of cell theory

A

cells smallest unit of life
all living things made from cells
all cells arise from pre existing cells

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2
Q

what are atypical cells and give examples and reasoning

A

cells which are exeptions to cell theory
1. cells with no nuclues
eg. phloem sieve tube elements- to allow passage of phloem sap
eg. red blood cells- has more space for haemoglobin so more oxygen

  1. multinucleated
    eg.skeletal muscle cells- formed via fusion of multiple cells
    eg. aseptate fungal hyphae.- not composed of ditinct cells
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3
Q

explain skeletal muscle cells

A

formed via fusion of multiple cells
really long as function is contraction must have many nucleuses for production of actin and myosin (proteins which make proteins)

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4
Q

explain aseptate fungal hyphae

A

not composed of distinct cells instead of roots have hyphae which move when sense resources to do this must have many nuclei to branch into differnet directions

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5
Q

MR MH GREN stand for

A

movement
reproduction
metabolism
homeostasis
growth
response to stimuli
excretion
nutrition

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6
Q

movement

A

change in position

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7
Q

reproduction

A

livign things produce fertile offspring either sexually or assexually

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8
Q

metabolism

A

web of all the enzyme catalysed reactions in a cell or organism e.g respiration

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9
Q

homeostasis

A

maintainece of regulation of internal cell conditions

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10
Q

growth

A

living things can grown or change shape

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11
Q

response to stimuli

A

living things can respond to and interact with the enviornment

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12
Q

exrection

A

the removal of metabolic waste produced by the metabolism

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13
Q

nutrition

A

feeding by either the synthesis of organic molecules (e.g photosynhteisis) or the absorption of organic matter

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14
Q

parts in an optical microscope

A

eyepiece objective
nose piece
objective lenses
stage
condenser/ diaphragm
LED light source
base
fine focusing dial
coarse focusing dial
microscope stans

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15
Q

eyepiece graticule

A

scale found in optical lens
has arbitary units (no units) even if magnification increase size of eyepice graticule does not change

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16
Q

stage micromenter

A

slide with a ruler

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17
Q

how light microscope works and what it allows us to see

A

uses light to form an image
allows observation of whole cell large organelles (e.g nucleus chloroplasts) and some bacteria
can resolve objects as close as 0.2 micrometers apart

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18
Q

how transmission electron microscope works and what it allows us to see

A

uses beam of electrons that pass through a very thin specimen
can resolve objects as close as 0.2 nm apart
provides detailed images of internal cell structures such as ribosomes, membranes and mitchondria
produces black and white mage recquiring computer processing for enhancments

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19
Q

how scanning electron microscope works and what it allows us to see

A

uses beam of electrons that scane accross the surface of the specimen
produces a 3D image of the specimens external structure
produces black and white image recquiring computer processing enhancment

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20
Q

advantages and disadvantages of light microscope

A

ad;
-can be used to observe living specimesn
-produces colour images
-relatively inexpensive, eas to use

dis;
-limited magnification (x1500)
-cannot see fine details of organelles
-limited resolution due to light wavelength
-cannot view internal strucutres

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21
Q

advantages and disadvantages of transmission electron microscope

A

ad;
-provides the highest resolutin (x 1000000)
-allows visualization of small organelles eg.ribosomes, endoplasmic reticulum and lysosomes
-provides isnites into cell structure and function

dis;
-specimens must be very thin and completely dehydrated before imaging
-recquires extensive sample prepration, may introduce artifacts
-time consuming and expensibe sample prepartion
-images produced balc and white unless artificially coloured

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22
Q

advantages and disadvantages of scanning electron microscope

A

ad;
-produces detailes 3D images of specimens
-has much higher resolution than a light microscrope

dos;
-specimes must be dead because they are placedin a vaccum
-time consuming and expensive sample preparation
-lower resolutio than transmission electron microscope but higher than light
-images are black and white unless artificially coloured

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23
Q

describe cryogenic electron microscopy

A

freezing a sample to cryogenic temperatures to fix the molecules, making them more firm or stable.

specimen is then viewed using electron microscopy.

Freezing the sample improves the resolution of the image formed and reduces damage that may occur from the electron beam.

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24
Q

describe freeze fracture

A

freezing a sample and then using a specialised tool to break the sample into small pieces.

small pieces are then observed using an electron microscope to see the internal structure.

useful technique for being able to visualise structures that are not normally visible, such as the internal plasma membrane.

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25
fluorescence miscroscopy
When the dye is added to the sample it will preferentially attach to certain structures. As in immunofluorescence, the labelled areas will appear as brightly coloured spots, allowing visualisation of the target molecule throughout the specimen.
26
cytoskeleton
complex netowrk of fibres made of 3 proteinaceous elements microfilaments intermediate filaments microtubules
27
microfilaments
protein subunits- actin strucutre- two intertwined strands functions- maintain cell shape, motility, contraction, cytokinesis can grow or shrink as actin subunits added or taken away
28
intermediate filmanets
protein subunits= fibrous protein eg.keratin strucutre- fibres wound into thicker cables functions- maintai cell shaoe, anchor nucleus and organelles form dense network help anchor nucleus into place
29
microtubules
protein subunits- a and b tubulin dimers strucutre- hollow tubes functions- maintain cell shape, motilit, move chromsomes, move organelles largest cytoskeletal component, grows and shrinks as tubulin subunits added or removed
30
what do all components of cytoskeleton have in common
all help maintain cell shape
31
importance of cytoskeleton being a dynamic structure
can move and change alter cell shape meaning materials can move in and out of ell, and cell itself can move
32
what organlle is involved in final secretion of digestive enzymes from cell
secretory vesciels
33
which organelle replicates mitosis and generates spindle
centrioles
34
what is the sequence of sedmentation of cell components with increasing speed o centrifiguation
the smaller the organelle the highest its speed
35
what contains highest conc of RNA
nucleolus
36
LUCA
last universal common ancestor all living organisms originated from one common ancestor LUCA- gave rise to prokarayotic eukarayotic prokarayotic give rise to; -eubacteria -archae eukarayotic give rise to; -protist -fungi -plant -animal
37
what are the two processes which are though to have led to the origin of eukarayotes
1- infolding of the prokarayotic cell membrane- creates internal micro-enviornments, advantage= increase efficiency 2- theory of endosymbiosis -early eukarayotic cells engulfed aerboic bacteria but did not digest them, led to the origin of mitpchondria -early eukarayotic cells engulfed photosynthetic bacteria, did not digest them, led to origin of chloroplast
38
explain infolding of the prokarayotic cell membrane
1.ancestral prokarayote (lacks internal membrane compartmentalisation) 2.given enviornmental or abiotic changes prokarayotic cells adapted their structure by forming invaginations of cell membrnae 3. this internal folding formed a vesicle that trapped dna round in the cytoplasm forming nucelar membrane 4. those primitive eukarayotic cells evolved by forming other membrnae bound organelles that originiated from the infolding of plasma membrane
39
describe theroy of endosymbiosis
1. formation mitochondrion eukarayotic cells engulfed ancwestor aerobic bacteria evidence for this, it that mitochondira had an internal membrane composed of proteins found in abcteria cells + an external membrane composed of proteins found in eukarayotic cells 2. formation chloroplasts same thing but engulfmenet of photosyntheticn bactertia note// fluidity of membrane allows endocytosis to occur
40
what is structural evidence for the engulfement of both the mitochondira and chloroplasts
- same approcimate site and shape as prokarayotes -mitochondria and chloroplast, double membrane, inner is from prokarayotic and outer membrane from eukarayotic -both have 70s ribosomes while eukarayotes has 80s ribosomes
41
genetic evidence for the engulfement of both the mitochondira and chloroplasts
-circular naked DNA like prokarayotic cells, eukarayote= linear- dna wraped histone proteins -share common DNA sequences with bacterial cells
42
functional evidence for the engulfement of both the mitochondira and chloroplasts
-move independetly without support cytoskeleton, move independently with eukarayotic cell -reproduce independetly of host cell through process similar to binar fission -are inhibited by antibiotics as are prokarayotes
43
endosymbiosis
because one cell livid with the other and became increasingly interdependet until the unit could only exist as a whole
44
what is the cell theory statement
first cells must have arisen from non living material
45
what is the haldane and oparin model for origin of cells
independently proposed nearly identical hypothesis for steps of how life was created
46
what are the steps of cell theory
= prebiotic formation of carbon compounds inroganic compounds -> organic compounds (condition early earth led to formation carbon compounds eg. amino acids, nitrogenous bases -> polymer (monomers may have been able to spontaneously form polymers an early earth via anabolic reacions creating proteins and RNA strands ->self-replication (formation nucleis acid polymer (likely RNA) that can encode hereditary info, self replicate and catalyze chemical reactions ->formation of cell (protocell), (packaging molecules into membranes with an internal chemistry different from surroundings. Fatty acids can spontaneously form spherical bilayers, perhaps encapsulating the slef replicating molecules -formation of protocells that carry out metabolic reactions within an enclosed system is the final step of oparin haldane hypothesized process for origin of life
47
more simplified cell theory steps
1- spontaneous formation of simple organic molecules from inorganic compounds 2-assembly of carbon compounds into polymers 3- formation of polymer that can self replicat (enabling inheritance and variation) 4-packaging of molecules into compartments with an internal chemistry different from the surroudnings
48
what are the challenges when explaining origin of cells
-difficult to directly test hypothesis related to origin of cells because it happened billions of years ago as a result; -conditions on earth were very different -its not possible to replicate with certainty the conditions that would have ecisted on early earth -well preserved fossils are rare -the methods used to estimate dates of the first living cells have ranges of uncertainty
49
what were the conditions on early earth
atmosphere- "reducing atmosphere"; with higher porportion of reactive gases such as ammonia and hydrogen, very little oxygen temperature- significantly warmer than today due to heat from asteroid collisions and accretion (coming together/ formation of the planet) uv radiation- no ozone layer to block radiation from the sun so intense UV radiation reached the surface volcanic activity- volcanic eruptions released gasses (H2O and CO2) into the atmosphere asteroid bombardment- constant bombardment by asteroids as the solar system was forming
50
what did the atmosphere on early earth contain
hydrogen nitrogen waper vapous methane ammonia hydrogen sulfide these gases came from volcanic activity, did not contain oxygen only ntil plants started photosynthesising
51
what was the first step of the oparin haldane test
test served to test hypothesis of whether simple carbon compounds can be formed from iorganic compounds they simulated earth conditions, earths water cycle - heat source- simulate volcanic activity -water- simulate primodial ocean this water evaporised electrodes- simulate lightning -gas inlet with ammonia, methane, hydrogen, carbon dioxide and water vapour- simulate atmosphere cooling jackets condensed water into a primodial soup, after resting for a week soup found to contain simple amino acids and comples oily hydrocarbons
52
describe the assembly of carbon compounds (organic compounds) into polymers
polymerization second step in oparin haldane hypothesis small molecules (monomers) combine chemically to produce large molecules (polymer) anabolic reaction, condensation reaction
53
what was the evidence of assembly of carbon compounds into polymers
genesadapted to organisms enviornments, genes likely to have been present in LUCA are clue about where and how LUCA lived genes indicated LUCA; -obligate anaerobe -chmoautotroph , obtain eneergy from hydrogen and converting co2 and nitrogen into essential organic compounds -able to live extreme heat -likely to have been raised from hydrothermal vents, issue supply reduced iroganic chemicals
54
descirbe thrid step of oparin haldane hypothesis
formation of polymer that can self replicate once formed small organic molecules may have been able to spontaneously form polymers on early earth
55
evidence of formation of polymer that can self replicate
-amino acids can spontaneously link togehter to form proteins -fatty acids could have been concentrated sufficiently to assemble into membranes -RNA nucleotides can link together when exposed to a catalyst found in clay or in water
56
RNA as first molecule of inheritance
-RNA first molecule to pass genetic info between generations -DNA very stable and effective stroing info but not able self-replicate, enzymes recquired -RNA can store info + self replicate, can catalyse formation of copies of itself -RNA that function as catalyst= ribozymes -in ribosomes RNA is found in catalytic site and plays role in peptide bond formation
57
RNA as a catalyst
ribosomes contain ribozyme, forms peptide bond between amino acids during translation all cells have ribosomes, ribosome used in translation to built polypeptide from an mRNA code
58
evidence of self replicating polymers
evidence RNA arose before DNA found in chemical differences between them -ribose easily produced lab to attempt to simulate conditions primative earth -deoxyribose harder to make, produced from ribose in reaction catalyzed by protein enzyme, suggests ribose predates deoxyribose in cels -DNA replaced RNA as more stable repository of genetic info -deoxyribose in DNA makes it more stable than chains RNA so that much greater lengths of DNA can be maintained -hydrogen bonds holding double helical strucutre of DNA add to stability -use of thymine instead uracil enhances DNA stability. Thymine much less succeptible to mutation
59
step 4 of oparin haldane hypothesis
formation of membranes to package organic molecules membranes can exist as vesicles, micelles or bilayers early cell membranes may have been formed from fatty acids, structurally simpler than phospholipids formation of an internal enviornment (due to bilayer) means optimal can be maintained
60
evidence of formation of fatty acid vesicle
fatty acids in watery solution, attracted to each other, will spontaneously form spherical strucutres= micelles shape micelle tucks hydrophobic tail together, away from water solvent under high conc, under appropriate PH conditions, can form vesicles instead of micelles
61
evidence of formation of phospholipid vesicle
chemist mixed glycerol+phosphate+many fatty acids put mixture in mixture gases (earths atmoshpere), phospholipids formed spontaneously phosphoilipids attarcted to eachother form membrane
62
evidence for formation of protocells
chemist included aminoa cids _ nucleic acid in mixture they were trapped inside membrane compartments spontaneously shows molecules likely existed on early earth could spontaneously give rise to membrane spheres and could trap randomly nearby molecules inside
63
formation of a membrane bound compartment occured when
fatty acids spontaneously coalesced to form spherical bilayers double layer of lipid molecules that encloses a space
64
why was the formation of vesicles important
created a physical seperation where the interior of a vesicle would have been able to provide a chemical enviornment with a different chemsitry to its external enviornment this allows the cell to control and maintain a precise set of conditions for proper cell functioning including ph and solute concentration
65
what was the importance of RNA in cell origin
it was the 1st genetic material, rna was the basis for formation of first cell-like structure acts as both genetic material and catalyst
66
function of rna in cell origin and its timeline
rna formed from inorganic sources able to replicate using ribozymes able to catalyze protein synthesis membrane compartmentailization ocurred inside the cell rna was able to produce both protein and dna dna took over as main genetic material because it is more stable proteins took over as catalytic form (enzymes) because they are more capable of variability
67
what is the evidnece that supports rna 1st hypothesis
short rna sequences shown to be able to duplicate other molecules of rna demonstrating that rna can self replicate rna has some catalytic activity acts as genetic material and enzymes of earliest cells ribozymes in ribosome are still used to catalyse peptide bond formation during protei synthesis
68
characteristics of LUCA
existed depp in ocean in alkaline hydrothermal vents, rich in hydrogen, dissolved materials (sulfur, methane, iron) which was used as lucas energy source was anaerobic, fits lack of oxygen in early atmosphere autotrophic, combinign inorganic carbon with hydrogen to produce carbon dioxide and formic acid
69
what was importance of lUCA bein located in hydrothermal vents
thye had high temp, this provided energy needed for formation of complex organic molecules recquired for cellular formation