4: Dominance and Epistasis Flashcards

1
Q

What is dominance

A

interaction between alleles at a single locus such that in heterozygotes one allele has more effect on phenotype that the
other. The allele with the greater effect is dominant over its recessive counterpart.

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2
Q

What is complete dominance

A

the phenotype of the heterozygous group is the same as one of the homozygous genotypes

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3
Q

What is a dominant allele

A

when the phenotype of the heterozygote is more similar to one of the homozygotes than the other, the allele in the more similar homozygote is called the dominant allele

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4
Q

What is partial dominance

A

the phenotype of the heterozygous group is between the two homozygotes but is more similar to one group than the other

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5
Q

Example of partial dominance

A

HYPP (hyperkalemic periodic paralysis) in horses
= episodes of muscle tremors (shaking-> trembling)
= having one copy of the mutation (n/H) leads to the condition
= but being homozygous for it (H/H) leads to more severe symptoms

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6
Q

What is no dominance

A

the phenotype of the heterozygous group is exactly midway between the phenotypes of the homozygous groups. There
is no dominant allele.

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7
Q

No dominance example

A

Gene that determines resistance to tuberculosis
= animals with two copies of a tuberculosis-resistant allele (TR) survive 100% of the time
= animals with two copies of a tuberculosis-susceptible gene (TS) survive only 40% of the time
= and heterozygotes (TRTS) survive 70% of the time
= each additional T^S allele adds 30% susceptibility

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8
Q

What is overdominance

A

the heterozygote exhibits a phenotype that is beyond the range of either of the homozygotes

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9
Q

Overdominance example

A

Gene that controls resistance to rat poison (warfarin) in rats
= AA and Aa are unaffected, survive more than aa
= AA also make less vitamin K, and are less healthy
= Aa are resistant and still make vitamin K

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10
Q

What is haplosufficiency

A

having one copy of the dominant allele is sufficient
e.g. in complete dominance

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11
Q

In overdominance, having two different alleles may give…

A

intermediate level of protein activity that is for some reason more optimal for phenotype, or having two alleles may give the protein a broader range of activities / capabilities

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12
Q

Slide 12

A

Read

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13
Q

What is epistasis

A

An interaction among alleles at different loci such that the impact
of alleles at one locus depends on which alleles are present at one or more other loci

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14
Q

Example of epistasis

A

Labrador retriever coat colour

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15
Q

Which loci are involved in lab coat colour? What do they do

A

MC1R and TYRP1

MC1R has alleles E and e
= if ee present, coat is yellow!!

TYRP1 has alleles B and b
= effect depends on what MC1R alleles are present
= if at least one E present, Bb or BB lead to black lab, bb leads to brown lab

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16
Q

The effect of the TYRP1 genotype on colour _________ ____ the MC1R genotype

A

depends on

17
Q

Which alleles are dominant in MC1R and TYRP1 respectively

A

E and B

18
Q

Explain the functions of MC1R and TYRP1 genes and why they have epistasis

A

An activated MC1R receptor triggers a chemical reaction that makes eumelanin
-> if theres no functional MC1R (ee) then pheomelanin is produced instead (yellow) regardless of TRYP1 alleles

TRP1 is involved in making eumelanin, and depending on the TRYP1 alleles present the eumelanin ends up black (BB and Bb) or brown (bb)

19
Q

Having two e alleles of MC1R means…

A

no eumelanin synthesis and no opportunity to observe black or brown colour; only yellow is produced

20
Q

Why do bbee yellow labs have pink noses

A

In the nose, some eumelanin is synthesized even in absence of functional MC1R protein, therefore it is possible to distinguish the TRYP1 genotype in yellow labs by nose colour

MC1R genes work diff in nose?

21
Q

What are some molecular mechanisms of epistasis

A

Direct interactions: e.g. genes encoding components
of a multimeric protein, or if one protein modifies the other (phosphorylation)

or indirectly: act in the same metabolic pathway or signalling pathway

22
Q

Relevance of dominance and epistasis to animal breeding for simply-inherited traits

A

Explain relationship btw genotype and phenotype
- helps devise selection and mating strategies for getting desired phenotype
- predict chance of getting phenotypes

23
Q

In polygenic traits, dominance and epistasis contribute to something called…

A

gene combination value