3 - anti-aging Flashcards
what is epigenome
compounds that attach to DNA and modify its function, like histone and methylation
what are telomeres
small repeated DNA at the end of chromosomes
what is chromosome attrition
telomeres are being fully copied, they shorted
what is senescence
when cells stop dividing (all cells can only divide a certain amount of times)
what is proteostasis
the synthesis and destruction of proteins
what can be an issue with altered proteostasis
when there is a buildup of defective proteins
what can be an issue with mitochondrial dysfunction
reactive oxidatice damage
what are 5 things that can contribute to biomolecular damage
- genome/epigenome instability
- telomere attrition
- mitochondrial dysfunction
- senescence/stem cell exhaustion
- altered proteostasis, cell communication and nutrient signalling
what is caloric restriction
30% reduction in caloric intake without malnutrition
what is hormesis
the body’s stress respsonse
how does CR make less reactive oxygen species (ROS)
less food intake which produces less ROS (byproduct of metabolism)
what are 4 possibilities of mechanisms of how CR works
- hormesis
- less DNA damage
- less ROS
- lower metabolism/temp
how were genes involved in longevity identified in the early days
random mutagenic screen in genetically tractable organisms with short lifespans (cause DNA damage, breed, see how long they live, see which genes are affected)
how were genes involved in longevity identified currently
systemic-wide screen and genome-wide association students
what is systemic-wide screen and genome-wide association students
sequences genes of people that live a long life and compare it to people that live a normal life
what is a dauer
the vegetative state a worm does into when it is stressed. exists when nutrients and stuff
what was the first longevity gene characterized
DAF-2 (Dauer formation-2)
what happens to DAF-16 when you increase DAF-2
DAF-16 decreases
what happens when you knockout DAF02
worms live twice as long
do you want to increase DAF2 or DAF16
DAF16
what happens to the DAF-2 pathway during calorie restriction
the pathway is decreased
what is DAF16
a downstream transcription factor of DAF2
what happens when you decrease DAF16
live shorter
what is the DAF2 receptor in humans
insulin/IGF receptor
what is the DAF16 receptor in humans
FOXO transcription factor
what happens when you have a mutations in the IGF-1 activity
often linked to living loner
what happens with FOXO variants (maybe like extra)
linked to longevity
what happens in type 2 diabetes
excessive reduction in insulin signalling
what is LY924002
ATP competitive drug to reduce the insulin pathway
what happens when you use peptides which act as competitive inhibitors of the insulin receptor
lifespan increases because the pathway is reduced
what happens when you use peptides which act as activators of the insulin receptor
lifespan decreases because the pathway is increased
what is Wortmannin
non competitive inhibitor that inhibits P13K enzyme and blocks the insulin pathway
what happens when you knockout SIR2 in yeast
shortens lifespan
what happens when you overexpress SIR2 in yeast
extends lifespan
what is acetylation and where does it add to (aa)
post-translational modification that is added to lysine residues
what does acetylation regulate
protein activity, stability, localization and structure
what are some examples of acetylation
histones/chromatin structure
what happens to levels of acetylation during aging
levels of acetylation can be deregulated
what kind of molecule is SIR2
a nucelar deacetylase enzyme (removes acetylation from proteins)
how does SIR2 do its enzyme stuff (what does it use)
it uses NAD as a cofactor
what is NAD+
metabolic intermediate which has roles in glycolysis and CAC
what happens to NAD+ levels when energy is low
NAD+ is high
what does CR do to SIR2 and how
activate by raising NAD+ which activates SIRT1
what happens to NAD+ levels when energy is high (after eating)
low because NADH is formed
what is SIRT2=? in mammals
SIRT1
what are 2 main things that SIRT1 does
improves lifespan and healthspan (healthy years of one’s life)
what binds in the SIRT 1 active site
NAD
what is resveratrol
an allosteric sir2/ sirt1 activator
what is SRT1720
an allosteric sir2/ sirt1 activator
what can resveratrol and SRT1720 do
protect against heart disease, cancers, diaBETES, ALzHEiMERS
STR1720
bioactivity :D
how does boosting NAD+ affect SIRT1
it can activate SIRT1 because there are more co-substrates to activate it
why cant we just take NAD+ pills to live forever
because it is large and charged and cant really permeate into the cell
what drugs can we use to boost NAD+ in the body
NR and NMN precursors
what do you do to mTOR if you want to increase lifespan
inhibit
what happens to mTOR during CR
it is suppressed
which pathway is mTOR linked to
lots of other longevity pathways
what kind of molecule is mTOR
a serine/threonine protein kinase of the PI3K-related family
what does mTOR do
regulates cell growth and metabolism in response to nutrients and hormones (adds phosphorylation post-translational)
what does rapamycin do
inhibits mTOR through the formation of a bridged ternary complex
what is a way that you can use rapamycin
immunosuppressant or cancer drug
how can you change the AAK-2 pathway to extend lifespan
overexpress it
what happens to AAK-2 during CR
activated
which two pathways do you want to increase to increase life span
AAK-2/AMPK and SIRT1/2
which two pathways do you want to decrease to increase life span
insulin/IGF-1 & DAF-2
mTOR
what other pathways is AAK-2 involved in
many other pathways involved in aging
what is AAK-2 in mammals
AMPK
what does AMPK do
adds phosphorylation to proteins (post translational modifications)
what happens to AMPK with low nutrient levels and why
activated because AMP is high
what happens to AMPK with high nutrient levels
not activated because AMP is low
what does AMPK need to be activated
AMP
what does AMPK do to insulin sensitivity
increases is
what does AMPK do to sirtuins and mTOR
AMPK activates sirtuins and represses mTOR
what does metformin do and how
activates AMPK indirectly (probably through ETC complex 1)
why is metformin used for insulin
because it is insulin sensitizing
what does AICAR do
mimics AMP to be a direct activator of AMPK
is AICAR permeable
not permeable
resveratrol is an allosteric activator of which enzyme
SIRT1
what is the difference with crRNA, gRNA and sgRNA
they all the same for our info, all CRISPR RNA