Week 2: macromolecules - Carbohydrates + lipids (S&F) Flashcards

1
Q

what are the 4 types of carbohydrates?

A
  1. Monosaccharides
  2. Diasaccharides
  3. Oligosaccharides
  4. Polysaccharides
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2
Q

what is a monosaccharide and what are they called when they have different number of carbons?

A
  • e.g. glucose and fructose
  • simple sugars
  • freely soluble in water and colourless
  • crystalline solids
  • contains different numebr of carbon atoms:
    1. trioses = 3 carbons
    2. tetrose = 4 carbons
    3. pentose = 5 carbons
    4. hexoses = 6 carbons
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3
Q

what is a disaccharide?

A
  • 2 monochaccharide units joined by glycosidic linkages (covalent bonds).
  • e.g. sucrose (glucose + fructose), maltose (2x glucose)
  • alpha or beta form.
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4
Q

what is a Oligosaccharide?

A
  • 3-10 monosaccharide units
  • usually covalently joined to a non-sugar molecule (lipid or protein) to form glycoconjugates.
  • e.g. glcoconnjugates = glycolipids and glycoproteins.
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5
Q

what is a polysaccharide?

A
  • long chains of carbohydrate molecules, composed of 100-1000s monosaccharide units, joined by glycosidic linkages.
  • most carbohydrates in nature
  • high molecular weight.
  • e.g. starch (potatoes), cellulose (wood), glycogen (storage of glucose in liver/muscles)
  • can be branched or unbranched.
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6
Q

how are the 4 ways polysaccharides can differ?

A
  1. the recurring monosaccharides
  2. length of the chains
  3. type of glycosidic bonds linking the units
  4. degree of branching which determins the solubility of diff. polysaccharides.
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7
Q

what are the 2 types of polysaccharides

A
  1. Homopolysaccharides
    - contains only 1 type of monosaccharide units.
    - e.g. storage = glycogen and starch
    - e.g. structural = cellulose and chitin.
  2. Heteropolysaccharides
    - 2 or more types of monosaccharide units
    - involved in extracelllular support and protection
    - e.g. peptidoglycans (in bacteria walls), proteoglycans, hyaluronic acid.
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8
Q

what is a glycosidic bond?

A
  • covalent bonds
  • joins monosaccharides to form poly- or di- saccharides.
  • during polysaccharide synthesis –> condensation reaction process where one enzym eists for each monosaccharide.
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9
Q

what are the 2 types of glycosidic bonds?

A

**1. Alpha **
- OH group of the first numerica carbon of the first monosaccharide is below the plane of the carbohydrate ring.

2. Beta
- Oh group of the 1st carbon of the 1dt monosaccharide is above the carbohydrate ring.

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10
Q

what is hyaluronic acid?

A
  • located in the epidermis
  • helps skin stretch and flex, reduces wrinkles and lines, helps wounds heal faster, reduce scarring.
  • have a high net-negative charge –> produces viscous, long, thin, molecules.
  • negative chanrges repel eachother –> pushes molecule out into a long polysaccharide chain.
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11
Q

what is a proteoglycan

A

a hylauronic acid attached to extracellular protein/ carbohydrate molecule called aggrecans.
- e.g. central components of the ECM of cartilage and tendons.

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12
Q

why are polysaccharides (such as glycogen) relatively insoluble?

A
  • glycogen is a storage polymer - more compact due to higher degree of branching than starch
  • glycogen is insoluble in liver and muscles –> :. contribute less to osmotic strength of cytosol.
  • does not have free polar groups to H-bond with water –> water cannot surround the molecule :. relatively insoluble.
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13
Q

what is the biological advantage of glycogen for bacteria and mammal?

A
  • high dregree of branching –> allows for faster breakdown of polymers into monomers (monosaccharides) by having multiple sites for ezyme attachement
  • this produced glucose faster –> faster production of energy via storage.
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14
Q

how are glycosidic linkages notes - type of glycosidic bond and location.

A
  1. alpha or beta
  2. location (e.g. 1–> 4 or 1–6)
    - a (1–> 4) = alpha glycosidic bond joins the 1st carbon of one monosaccharide unit to the 4th one of the other monosaccharide unit.
    - a(1–>6) = alpha glycosidic bond between 1st and the 6th carbons. in glycogen, this occures every 8-12 glucose units while the rest is a(1–>4) which causes branching of molecules due to different orientation of the second monosaccharide.
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15
Q

how does structure of glycogen assist with storage and fight or flight response?

A
  • glucose is highly branched :. more opportunity for enxymes to bind and attack glycosidic linkages to break off glucose into blood stream
  • the glucose then undergoes aerobic respiration –> makes ATP –> used as energy in th body.
  • during fight or flight scenarios, there is a high requirement of energy (ATP) for muscles, therefore, due to the branching of glycogen, it can be broken down quicker and glucose be released into blood stream faster.

for storage:
- the a(1–>4) glycosidic linkages allow for a tightly coild helical structure –> molecule is relatively insoluble and does not draw in lots of water –> perfect for storing.

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16
Q

what is glycogenolysis

A

the process in which glycogen down via glycosidic linkages to glucose molecules which then ungergo aerobic respiration to create ATP.

17
Q

where is glycogen stored in

A

liver and skeletal muscle.

18
Q

what is peptidoglycans and what role does it play in bacteria?

A
  • made up of heteropolysaccharides of alternating B(1–>4) linked GAGs.
  • GAGs lay side by side in cell wall and cross link by short pepides ==> peptidoglycans.
  • serves a structural role in bacterial cell wall –> gives strength and counteracts the osmotic pressure of cytoplasm.
19
Q

what do lysozymes do to peptidoglycans?

A
  • lysozymes degrade peptidoglycans.
  • hydrolyses glycosidic bonds in the GAGs –> breaking down the peptidoglycan in cell wall structure.
    –> leads to rapid killing of gram-positive organisms.
20
Q

what is gram-negative and gram-positive bacteria?

A
  • gram-negative = This layer of peptidoglycan
  • gram-positive = Thick layer of peptidoglycan
21
Q

structure of proteoglycans

A
  • usually hyaluronic acid attached to extracellular protein/corbohydrate molecule.
  • long strands of hyaluronate to which core proteins or aggrecans are attached non-covalently.
  • core proteins have shorter GAGs covalently attached which are negatively charged :. repel eachother
  • very large molecule with upto 150 polysaccharide chains attached to core protein making up an aggrecan and more than 100 aggrecans attached to a hayularonate –> making a proteoglycan.
22
Q

role of proteoglycan on extracellular matrix

A
  • proteoglycans are hyaluronic acid usually attached to extracellular protein/carbohydrates (aggrecans)
  • form viscous solution –> lubricants in synovial fliud
  • central components of extracellular matrix of cartilage and tendon.
23
Q

what is a glycoprotein

A

oligosaccharides attached to proteins

24
Q

what are proteoglycans

A

hyularonic acid attached to extracellular protein/carbohydrate molecules called aggrecans.

25
Q

what are lipo-polysaccharides

A

important outer membrane components of gram-negative bacteria and a prime target of antibodies.
- lipid portion is toxic to humans and responsible for paritally lethal low BP

26
Q

what is a saturated fatty acid?

A
  • no double bonds between carbon molecules
  • straight carbon chain :. can stack closely.
  • derived from animals
  • generally considered harmful
  • solid at room temp
27
Q

what is an unsaturated fatty acid?

A
  • at least 1 double bond, kink in the structure
  • molecules cannot stack closely
  • derived from plants and marine animals
  • generally associated with health
28
Q

what are the 2 types of unsaturated fatty acids?

A

1. mono-unsaturated fatty acids
- one double bond

2. poly-unsaturated fatty acids
- more than 1 double bond
- e.g. omega-3 and -6

29
Q

what are Omega-3 and 6 fatty acids

A

Omega 3
- double bond at 3 carbons from the omega (last) carbon

omega-6:
- double bond at 6 carbons from the omega carbob

both cannot be synthesised in the body and must be via diet

30
Q

what is a triglyceride?

A
  • large ester molecule
  • 3 fatty acid molecules with a glycerol
  • react in a condensation reaction producing a water molecule in the process
31
Q

what is a sphingolipid?

A
  • class of membrane lipids
  • vital for structural and signalling molecules in organisms
  • 2 polar head groups, 2 non-polar tails –> :. amphipathic molecule due to presence of both domains.
  • core = long chain amino alcohol sphingosine - act similarly to glycerol
  • component of all membranes and abundant in myelin sheath.
32
Q

what is a phospholipid?

A
  • formation of lipid bilayer/ cell membrane.
  • hydrophobic, phosphate head
  • hydrophillic lipid tail - 2 fatty acids
    - one fatty acid = saturated (straight chain)
    - one fatty acid = unsaturated (kink in chain)
33
Q

what does the double bond (kink) in the carbon chain of a fatty acid do to its physical properties?

A
  • the kink = chain can’t be closely stacked together –> weak secondary properties which decreases melting point.
  • –> at room temp. unsaturated fatty acids = liquid
  • –> at room temp. saturated fatty acids = solid
34
Q

why does the structure of triglycerides allow for storage of fat in adipose tissue?

A

triglycerides contain 3 fatty acids attached to a glycerol molecule.
- the hydrocarbon fatty acids are dense with energy are they are convalently bonded. –> therefore, have high energy stores.
- they have low solubility in water –> hence, triglycerides can aggregate together without dissolving aqueous environment –> facilitating their storage as droplets in adipose cells.
- hydrolysis of the triglycerides to form fatty acids will be used during periods of energy deprivation

35
Q

what is amphipathic and give an example?

A
  • a molecule which contains both hydrophillic and hydrophobic parts.
  • example: phospholipid.
36
Q

3 types of membrane lipids

A

phospholipids, glycolipids and sphingolipids.

37
Q

how are lipids associated with blood groups?

A
  • glycolipids in the membrane of red blood cells determin the blood group.
38
Q

what role does cholesterol play in cell membrane?

A
  • maintians membrane fluidity
  • at high temp, acts to stabalise cell membrane and increase melting point
  • at low temp, cholesterol inserts into phospholipids and prevents them from interfering with eachother –> avoid aggregation.