Viruses Flashcards
recombination
exchange of genes btwn 2 chromosomes by crossing over w/in regions of homology
reassortment
when viruses w/segmented genomes exchange genetic material
influenza
complementation
HVD
phenotypic mixing
simultaneous infection of a cell w/2 viruses
genome A can be partially or completely coated w/surface proteins from virus B
live attenuated vaccines
Live! See small yellow rotating chickens get vaccinated w/Sabin and MMR, Its INcredible Small pox yellow fever chicken pox Sabin polio MMR Influenza (intranasal)
Killed vaccines
RIP Always Rabies Influenza salk Polio HAV
DNA viral genomes
All DNA viruses except Parvoviridae are dsDNA all are linear except papilloma, polyoma, and hepadnaviruses (cicular) are icoshedral (except pox) Replicate in nucleus (expect poxvirus)
RNA viral genomes
All RNA viruses except Reoviridae are ssRNA
replicate in cytoplasm (except influenza and retroviruses)
+ strand RNA viruses
retro toga party where I drank FLAvored Corona and ate hippy California pickles retrovirus togavirus flavivirus coronavirus hepevirus calicivirus picornavirus
naked viruses
give PAPP smears and CPR to a naked Heppy PAPP = DNA, CPR and hep = RNA papillomavirus adenovirus parvovirus polyomavirus calicivirus picornavirus reovirus hepevirus
DNA viruses
HHAPPPPy viruses Hepadena Herpes Adeno Pox Parvo Papilloma Polymyoma
Herpesviruses
enveloped dsDNA, linear HSV 1, 2 VZV (3) EBV (4) CMV (5) HHV 6 (roseola) HHV 7 (less common roseola) HHV 8 (kaposi sarcoma)
Hepadnavirus
enveloped
partially DS and circular
HBV
adenovirus
naked dsDNA and linear febrile pharyngitis pneumonia pink eye
parvovirus
naked ssDNA and linear smallest DNA virus B19 in kids hydrops fetalis
papillomavirus
naked
dsDNA and circular
HPV warts, CIN, cervical CA (16, 18)
polyomarvirus
naked
dsDNA and circular
JC- junky cerebellum
BK- bad kidney
poxvirus
enveloped dsDNA and linear largest DNA virus smallpox cow pox molluscum contagiosum
what is the most common cause of sporadic encephalitis?
HSV1
usually temporal lobe
what cells does EBV infect?
B cells via CD21
the atypical lymphocytes seen on smear are reactive cytotoxic T cells, not B cells
monospot test (agglutination of sheep or horse RBCs)
burkitt lymphoma and nasopharyngeal CA
Roseola
HHV 6,7
high fevers for several days, may cause seizures
followed by diffuse macular rash
Tzanck test
used to detect multinucleated giatn cells of HSV1,2 and VZV
can also see intranuclear inclusions
reoviruses
naked dsRNA linear, 10-12 segments icosahedral coltivirus (CO tick fever) rotavirus (MCC of fatal diarrhea in kids)
picornaviruses
naked ssRNA pos linear icosahedral PERCH: Polio echo rhino coxsackie HAV
echovirus
aseptic meningits
coxsackievirus
aseptic meningitis
herpangina (mouth blisters, fever)
hand, foot, and mouth disease
myocarditis, pericarditis
hepevirus
naked
ssRNA pos linear
iscosahedral
HEV
calicivirus
naked
ssRNA pos linear
icosahedral
norovirus
flavivirus
enveloped ssRNA pos linear icosahedral HCV yellow fever dengue St. louis encephalitis west nile
togavirus
enveloped ssRNA pos linear icosahedral rubella EEE WEE
retrovirus
enveloped
ssRNA pos linear (2 copies)
HIV- complex and conical
HTVL - icosahedral, Tcell leukemia
coronavirus
enveloped
ssRNA pos linear
helical
coronavirus and SARs
paramyxovirus
enveloped ssRNA neg linear, nonsegmented helical PaRaMyxovirus Parainfluenza- croup RSV Measles, Mumps
orthomyxoviruses
enveloped
ssRNA neg, 8 segments
helical
influenza
rhabdoviruses
enveloped
ssRNA neg linear
helical
rabies
filovirus
enveloped
ssRNA neg linear
helical
ebola
arenavirus
enveloped
ssRNA, neg circular, 3 segments
helical
lassa fever encephalitis
bunyavirsu
enceloped ss neg circular 3 segments helical california encephalitis sandfly/rift valley fever crimean congo hemorrhagic fever hantavirsus
delta virus
enveloped
ssRNA neg circular
HDV
neg strand viruses
Always Bring Polymerase Or Fail Replication arenaviruses bunyaviruses paramyxoviruses orthomyxoviruses filoviruses rhabdoviruses
segmented viruses
all RNA BOAR bunyavirus orthomyxoviruses arenaviruses reoviruses
yellow fever
falvivirus
Aedes mosquito
high fever, black vomitus, jaundice
Councilman bodies (eosinophilic apoptotic globules) on liver Bx
influenza viruses
orthomyxoviruses
enveloped, neg ssRNA, 8 segments
hamagglutinin (viral entry)
neuraminidase (progeny virion release)
rubella virus
togavirus
aka german measles
fever, lymphadenopathy, arthralgias, fine rash
TORCH- blueberry muffin baby
paramyxoviruses
parainfluenza- croup RSV mumps measles surface F protein -> fuse -> multinucleated giant cells
measels
rubeola virus
1-prodromal fever w/cough, coryza, conjunctivitis
2-koplik spots
3- rash starts and head moves down
lymphadentis w/warthin-finkeldey giant cells w/background paracortical hyperplasia
SSPE years later
vit A supplementation can reduce mortality
mumps
paramyxovirus POM: parotits orchiits aseptic meningitis
rabies
bullet shaped virus
negri bodies in purkinjie cells
HAV
RNA picornavirus
F-O
no carrier
no increased risk for HCC
HBV
DNA hepadnavirus
parenteral, sexual, perinatal
carrier state
increased risk for HCC
HCV
RNA flavivirus
primarily blood transmission
carrier state
increased HCC risk
HDV
RNA delta virus parenteral, sexual, perinatal carrier state superinfection short- HDV after HBV coinfection long- HDV w/HBV
HEV
RNA hepevirus F-O, especially water bourne no carrier no increased HCC high mortality in prego women
HIV
diploid RNA genome binds CD4, CCR5 on macros, and CXCR4 on T cells 3 structural proteins: env (gp120, gp41) gag pol
env
gp 120- attachment to host CD4
gp41- fusion and entry
gag
aka p24
capsid protein
pol
reverse transcriptase
aspartate protese
integrase
pathogens once CD4
Candida albicans EBV Bartonella henselae HHV-8 Cryptosporidum HPV
EBV
oral hairy leukoplakia
Bartonella henselae
bacilllary angiomatosis
neutrophil inflammation
HHV-8
kaposi sarcoma
lymphocytic inflammation
cruptosporidum
chronic watery diarrhea
acid-fast oocysts in stool
pathogens once CD4
toxoplasma gondii
HIV dementia
JC
pneumocystis jorovecci
toxoplasmas gondii
multiple brain abscesses
JC virus
progressive multifocal leukoencephalopahty
demylination on MRI
Pneumocystis jirovecii
ground glass on CXR
CD4
aspergillus fumigatus cryptococcus neoformas candida CMV EBV Histoplasma capsulatum MAI
aspergillus fumigatus
hemoptysis
pleuritic pain
cavitation or infiltrates on CXR
cryptococcus neoformans
meningitis
encapsulated yeast on india ink
CMV
retinitis, esophagitis, colitis, pneumonitis, encephalitis
linear ulcers on endoscopy
cotton wool spots of fundoscopy
EBV
B cell lumphoma