Virus in the respiratory tract II Flashcards
Rhinovirus belongs to the family of ______
Picornaviridae
The family Picornaviridae is made up of many ______ and ____ types
enterovirus and rhinovirus types
Other viruses under Pircornaviridae
■ Poliovirus
■ Rhinovirus
■ Echovirus
■ Coxsackievirus
Rhinovirus has more than ____ serotypes
150
Rhinovirus can cause upper or lower respiratory tract infections?
upper
Two receptor groups of Rhinoviridae
Major and Minor
Low-density lipoprotein receptor family (LDLR) as receptor
Minor receptor group
Intercellular adhesion molecule (ICAM-1) as
receptor
Major Receptor Group
pH at which rhinovirus is inactivated
3.0
What are the steps for Picornaviridae replication?
- Uptake
- Release of the viral RNA
- Translation
- Proteolytic processing
- (-) RNA synthesis
- (+) RNA synthesis
- Encapsidation
- Cell lysis
VPg Protein is always linked to the _____ genome
(+) ssRNA genome
There are high titers of Rhinovirus in ______
Nasal secretions
Replication of rhinovirus is limited to the _____
surface epithelium
Symptoms of Rhinovirus
- Sneezing
- Nasal Obstruction
- Nasal discharge
- Sore throat
TRUE OR FALSE: For URTI, antibiotics are needed for treatment.
FALSE, most common causes of URTI are viral
Secondary bacterial infections caused by Rhinovirus
○ Otitis media
○ Sinusitis
○ Bronchitis
○ Pneumonitis
Recovery of illness usually ____ antibody production
Precedes
Rhinovirus attack rates are higher in ____ and lowest in _____
rainy seasons, summer
The _____ is a major site of spread for rhinovirus
Family unit
Difficulties in developing rhinovirus vaccine
○ Difficulty in growing rhinoviruses to high titer in culture
○ Fleeting immunity
○ Multiplicity of serotypes
The crown chape of Coronavirus is caused by the _______
spike proteins around the virion
What are the novel coronaviruses that caused pandemics?
■ Severe acute respiratory syndrome-CoV (2003)
■ Middle East respiratory syndrome-CoV (2012)
■ SARS-CoV-2(2019
The SARS-CoV outbreak was first reported in _____
China
MERS-CoV has a direct or indirect connection with the ____
Middle East
MERS-CoV is ___ transmissible than SARS-CoV, and is _______ deadly
less transmissible, more deadly
This coronavirus can cause acute renal failure.
MERS-CoV
the SARS-CoV-2 is most closely related to ___
bats
______ is the intermediary mammal invoked as potential bridge in the jump to humans of SARS-CoV-2
Pangolin
The spike protein of SARS-CoV-2 is attached to what receptor?
ACE2
Where are ACE2 receptors highly expressed in humans?
Lungs
Steps in Viral life cycle of SARS-CoV-2
- Binding
- Entry
- Uncoating of + ssRNA
- Translation of polyproteins
- Proteolysis
- Formulation of DMVs
- Replication and Transcription of ssRNA.
- Formation of subgenomic RNAs
- Translation of S, E, and M proteins
- Formation of helical nucleocapsids
- Processing and maturation
- Exocytosis
____ is a serine protease that will cause the cleavage of the spike protein once it binds.
TMPRSS2
What is the site for replication and transcription for SARS-CoV-2?
Double membrane vesicles
What are S, E, and M proteins?
S - Spike
E- Envelope
M - Matrix
High ____ levels can lead to an overactive or unregulated immune response in COVID-19 patients
IL-6
Symptoms of Critical Disease in COVID-19
○ Acute respiratory distress syndrome (ARDS)
○ Acute cardiac injury
○ Multi-organ failure
Symptoms of Severe Disease in COVID-19 patiends
- Dyspnea
- Presence of coexisting illnesses
High-Risk groups for COVID-19
○ Males
○ Blacks, native Americans, Latin
○ Older age(>65) with comorbidities
○ Comorbidities
Viral shedding for COVID-19 starts ___ before symptom onset
1-2 days
Incubation period for COVID-19
Mean of 5-6 Days, range of 2-12 days
Diagnosis of COVID-19
- Molecular (rRT-PCR)
- Antigen
- Serologic
- Viral Culture
RT-PCR only detects genetic material (RNA) and doesn’t measure _____
viability
Antivirals for COVID-19
Remdesivir and Molnupiravir
Types of Vaccines used for COVID-19
- Inactivated vaccine
- mRNA vaccine
- Adenovirus vector
The sputnik V vaccine uses _____ and ____ vectors for the first and second dose
adenovirus 26 (Ad26)
adenovirus 5 (Ad5)
AstraZeneca vaccine uses ________ as the vector
chimpanzee adenovirus
Johnson & Johnson(Janssen) vaccine uses what adenovirus
adenovirus 26 (Ad26)
COVID-19 variants happen when there are _____ from the original virus
point mutations
Variants of Interest for COVID-19 is a variant with specific genetic markers (mutations) that
have been associated with:
○ Changes to receptor binding
○ Reduced neutralization by antibodies generated against previous infection or vaccination
○ Reduced efficacy of treatments
○ Potential diagnostic impact
○ Predicted increase in transmissibility or disease severity
Variants of concerns for COVID-19 has evidence of:
○ Increase in transmissibility
○ More severe disease (e.g., increased hospitalizations or deaths)
○ Significant reduction in neutralization by antibodies generated during previous infection or vaccination
○ Reduced effectiveness of treatments or vaccines
○ Diagnostic detection failures
Currently known variants of concern
○ B.1.351 (South African)
○ P.1(Brazil)
○ B.1.1.7 (UK)
○ B.1.617.2 (India)
○ B.1.1.529 (Omicron)
What is the 5th variant of concern for COVID-19?
Omicron
Which Covid-19 Variant is ore transmissible than the original SARS-CoV-2 with evidence suggesting that it has antibody resistance?
Beta B.1.351 (South Africa)
Which Covid-19 variant was first detected in Japan from Brazilian travelers where the effectiveness of antibodies dropped by 6-fold?
Gamma
P.1
Which Covid-19 variant was first detected in India where there was a potential reduction in neutralization by post vaccination sera?
Delta B.1.617.2 (India
What Covid-19 variant was first detected in South Africa where the neutralization efficacy of vaccine-elicited sera against Omicron was severely reduced?
Omicron B.1.1.529
This Covid-19 variant was first reported in the Philippines and did not become a variant of concern.
Theta PH-B.1.1.28 (Philippines)
Most important cause of lower respiratory tract illness in infants and young children
RESPIRATORY SYNCYTIAL VIRUS (RSV)
Replication of RSV usually occurs initially in the _____ of the _____
epithelial cells in the nasopharynx
Mediates fusion between the viral envelope and airway epithelial cells and results in the formation of multinucleate syncytia
RSV fusion (F) protein