Virology 3 Flashcards

1
Q

Rhabdoviridae shape and enveloped or non-enveloped

A
  • bullet shaped virions

- enveloped virus

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2
Q

List 3 main genera of Rhabdoviridae and example of disease within

A

1) Lyssavirus - rabies, Australia bat Lyssavirus (epidemiology different from rabies but vaccination effective against)
2) Vesiculovirus - vesicular stomatitis virus
3) Ephemerovirus - bovine ephemeral fever

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3
Q

Rabies, family and genus what are the 3 generally host species

A
Family Rhabdoviridae
Genus Lyssavirus
1) Dog rabies
2) Cattle rabies
3) Wildlife rabies
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4
Q

Rabies what animals at risk, incubation period, why?, main clinical sign

A
  • All warm blooded animals at risk
  • Variable incubation period: 14-90 days (years: depends on species, virus strain, site, inoculum)
    ○ Due to pathogenesis, strain of virus, species of animal, site of the bite -> children often bitten on the face
  • Change in mentation - aggressive or passive change
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5
Q

Rabies what are the 3 types in terms of clinical signs, what leads to and pathogenesis

A

1) Prodromal period: confused, disoriented
2) Furious rabies: increased aggressiveness hyper-excitable, roam long distance, bite inanimate objects
3) Dumb rabies: muscle weakness, inability to swallow (choke), salivation (hydrophobia) - mainly with livestock cattle rabies
- Invariably fatal
○ Terminally, seizures, coma, respiratory arrest and death within two weeks of onset of clinical signs
Pathogenesis…
- Transmission usually occurs through bites (although scratching and licking can transmit virus)

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6
Q

What are the steps in rabies movement within the host and results, when is post-exposure prophylaxis effective and what ultimately leads to death

A

1) Virus replicates in muscle cells
○ Binds to acetylcholine receptors
○ Before crosses the neuromuscular junction -> post-exposure prophylaxis is effective, once get into nerves DEAD
2) Very little virus replication in nerve cells
○ Virus infects peripheral nerve endings
○ Virus travels to CNS by retrograde axonal transport
- Variable incubation period (weeks – years) - Bites around face, deep bites = shorter incubation period
3) Virus travels to brain via spinal cord
○ Clinical signs reflect extent and site of neuronal damage by virus replication within neurones
○ Within CNS: infection of lymbic system
§ reduced cortical control of behaviour = Furious Rabies
○ Further spread within CNS (neocortex)
§ reduced CNS function = Dumb Rabies (death due to resp arrest)

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7
Q

How does Rabies infect other animals, the 2 important infectious cycles, where major issue and control

A

How get out and infect others
- Centrifugal spread in nerves – release from axon terminal
Infection of non-nervous tissue – Salivary glands -> transmission
1. Urban rabies in dogs (developing countries)
- >95% of human cases of rabies are from dog bites
○ Urban rabies in dogs: stray dog control and vaccination programs
- stray dog control and vaccination programs
2. Sylvatic rabies in wildlife (North America, Europe, Africa)
- Focus of public health in more developed countries
- More difficult where multiple species involved
○ Bat rabies in South American cattle (in cavers in N America)
○ Increased reporting of cases in USA (raccoon rabies)
- ONE VACCINATION PROTECTS AGAINST ALL RABIES WTIHIN DIFFERENT SPECIES

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8
Q

Rabies when does increase in cases occur, what does vaccine coverage need to reach to protect dog population, what is the most effective treatment and what is the issue with this treatment

A
  • Incidence of rabies in people increases proportionately with the dog population density.
  • Vaccination coverage needs to reach 60-80% of the dog population before significant reduction in human cases is seen.
  • Parenteral vaccination is more effective than oral baits in protecting dogs against rabies.
  • Accessibility to vaccine is not uniform for all dogs (~10% of dogs could be caught and vaccinated
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9
Q

What are the 2 ways to diagnosis, immune response and controls

A

Diagnosis
1) Post mortem diagnosis - immunofluorescence, Histological -> H and E stains looking for negri bodies
- Need to get the brain -> now at risk of rabies
2) Behavioural changes
Immune response…
- Protective immunity involves both humoral and CMI
- Immune hosts will clear virus from site of entry BEFORE virus enters the nervous system (post-exposure vaccination and RIG)

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10
Q

Control strategies for rabies and what depends on

A

Control

  • Inactivated and attenuated vaccine available and effective
  • Population control (desex and vaccinate) and vaccination
  • Attenuated vaccine bait
  • Requirements vary between countries depending on the species of reservoir hosts (fox, mongoose, dog…)
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11
Q

Vesicular stomatitis famile and genus, what is important about it, is it present in australia, clinical signs and athropods

A

Family Rhabdoviridae
Genus Vesiculovirus
- Clinically indistinguishable from FMD expect in HORSES AS WELL
- Exotic to Australia
- Vesicular lesions: (heal within 7-10 days)
Oral mucosa, teats, coronary band of cattle (XS salivation)
○ Snout and coronary bands of swine - Lesions of tongue of horses
- Spread by arthropod vectors

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12
Q

Bovine ephemeral fever family and genus, what spread by, where found, mortality and morbidity and when is mortality common

A

Family Rhabdoviridae
Genus Ephemerovirus
- Spread by Culicoides midges and Mosquitos
○ Outbreaks when conditions favour vector movement or movement of susceptible animals into an endemic area
○ In tropical regions, outbreaks occur after rainfall
○ In temperate regions, outbreaks in Summer
- High morbidity and low mortality -> high mortality involved with large animals (bull becoming recombinant -> myositis -> death)

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13
Q

Bovine ephemeral fever clinical signs, site of replication, incubation period and immune response

A

Clinical signs
- 3 day sickness -> get sick go down, get up and over it
- Sudden onset of fever and reduced milk yield
- Depression, lameness, recumbency
- Primary site of replication unknown -> local replication at site of the bite and then viremia
○ 4 – 7 day incubation
○ 3 – 4 day duration of viraemia associated with neutrophil fraction
Immune
- Neutrophilia: vasoactive amines cause increased permeability of serous membranes
- Neutralising antibodies by day 3 after clinical signs -> 3 day sickness

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14
Q

Diagnosis and control of Bovine ephemeral fever

A
  • Solid immunity post infection (cases in unexposed animals)
    ○ if outbreak couple of years, the following year just the young animals
  • Diagnosis by clinical signs (majority of herd affected) - down and sick for 3 days
  • Treatment with anti-inflammatories effective -> when the larger animals go down such as bulls as higher risk of mortality
  • Inactivated vaccine available
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15
Q

National arbovirus monitoring program what is the main goal, what important for

A
  • Monitors the distribution of economically important arboviruses:
  • Important in proving to trade partners proof of disease free status of diseases especially Bluetongue (sheep not near vectors)
    ○ Infectious disease is a barrier to trade
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16
Q

National arbovirus monitoring program list 3 ways they monitor

A

1) Sentinel cattle herds (serology) -> regular bases bleed certain animals and test to see whether antibody positive
○ If seasonally happening on annual basis want to bleed the younger animals to know if the disease is present recently
2) Serological surveillance
3) Insect traps -> where are the vectors? Are they causing the disease in certain areas, which species?

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17
Q

National arbovirus monitoring program what are the 3 main viruses that are monitored, what lead to and vector

A
  1. Bluetongue virus (BTV) that causes bluetongue disease in sheep and other ruminant animals
    - Culicoides brevitarsis
    - NT, aren’t allowed to have sheep as vectors do come into the NT
  2. Akabane virus that causes congenital abnormalities in ruminant animals
    - Culicoides brevitarsis
  3. bovine ephemeral virus that causes bovine ephemeral fever (BEF, or three-day sickness) in cattle and water buffalo.
    - Culicoides and mosquitoes
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18
Q

Bunyaviridae what are the 2 main genus and the main disease within

A
Family Bunyaviridae
Genus Bunyavirus
Akabane 
Family Bunyaviridae
Genus Hantavirus 
Haemorrhagic fever
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19
Q

Akabane how transmitted, what hosts and general transmission

A
  • Arbovirus (Culicoides brevitarsis) of sheep and cattle
    ○ Most other Bunya viruses are mosquito borne
  • Vertical transmission: foetal death, abortion, hydrancephaly, arthrogryposis
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20
Q

Akabane family and genus and epidemiology

A

Family Bunyaviridae
Genus Bunyavirus
- Widespread throughout tropical and subtropical regions in Middle East, Asia, Australia and Africa
- Sporadic epidemics correspond with movement of vectors (or movement of susceptible animals into endemic areas)
- Disease is seen in cattle, sheep, goats and deer

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21
Q

Akabane Pathogenesis

A
  1. Previously unexposed dam is bitten by infected vector
  2. Virus crosses placenta from maternal circulation without producing other clinical signs in mother
  3. Severity of clinical signs in the foetus depends on stage of gestation when infected
    - Primary foetal infection is an encephalomyelitis and polymyositis, curly leg
    ○ Severely affected foetuses die and are aborted or if infected early in gestation
    - Survivors develop large cavitations in the cerebrum, hydrancephaly and neurogenic arthrogryposis
    ○ Torticollis, Kyphosis, Scoliosis
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22
Q

Why is Akabane hard to diagnose

A

○ don’t notice when pregnant just during calving -> cannot do acute and convalescent as occurred within the mother many months before
○ No virus circulating in the foetus once born -> cannot detect there -> HARD TO DIAGNOSE

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23
Q

Diagnosis and control of Akabane

A
  • Diagnosis usually by gross pathological examination
    ○ Virus is difficult to isolate from foetus/newborn - caesarean
  • Inactivated vaccine available in Japan and Australia
    ○ Not cheap as not widely used
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24
Q

Hantaviruses transmission and hosts

A
  • No arthropod vector established
  • Unique among genera of Bunyaviridae
  • Rodent hosts
    ○ Genus and possibly species specific
  • Transmission
    ○ Aerosolization of rodent excreta (urine) -> occurred quite a lot in the war
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25
Q

List the transmission cycle of Hantavirus

A

1) Chronically infected rodent
2) horizontal transmission of infection by intraspecific aggressive behaviour
3) virus is present in aerosilised excreta particular urine
ALSO secondary aerosolsl, mucus membrane contact, and skin breaches are also sources of infection
4) possible to humans

26
Q

List the 4 DNA and 2 RNA oncogenesis

A
DNA viruses
• Poxviruses
• Herpesviruses
• Adenoviruses
• Papillomaviruses
RNA viruses
• Retroviruses
• Flaviviruses -> hepatitis C virus
27
Q

What occurs with RNA and DNA viruses in terms of transformation of cells

A
  • RNA viruses usually productive infection with progeny virions
  • DNA viruses usually non-productive with viral DNA either integrated into cellular genome or episomal (free piece DNA that is replicated)
28
Q

What id the function of viral and cellular oncogenes and list 4 different oncoproteins

A

Viral oncogenes (v-onc) - not necessary for viral replication
○ Acquired by retroviruses, picked up host gene and incorporated into genome
• cellular oncogenes (c-onc, proto-oncogenes) regulate cell function -> replication
• Growth factors
• Growth factor receptors
• Intracellular signal transducers
• Nuclear transcription factors

29
Q

What cells are generally target by viruses that lead to formation of tumor

A

Tumor suppressor genes and cell cycle control proteins-
• Negative regulation of cell cycle
• E.g. block at G1 phase of cell cycle
• Trigger apoptosis
Activate genes that result in proliferation, inhibit genes that stop this

30
Q

What are the 2 main types of retroviruses replication, how exert their effects and incubation period

A

Endogenous Provirus DNA entry -> mutating host chromosome - inject their genome into the host cell -> if they inject on a gene that results in upregulation of the proliferation genes or inhibition of cell cycle regulation
- One virus can inject many copies of their genome into host chromosomes
- Sporadic and long incubation period
Exogenous
Replication competent -> contains viral oncogene -> every-time infect cell causes transformation of that cells -> cancer after short incubation
Replication incompetent -> cancer after short incubation need the helper virus

31
Q

How to DNA viruses replicate and lead to cancer

A
  • Non-productive infection (incorporate viral DNA or extra chromosomally) - similar retrovirus pro-virus
  • Analogues of oncogenes (adenoviruses and papillomaviruses)
32
Q

Papillmaviruses what are the 3 different ways it causes cancer

A

1) Benign warts plus co-factors lead to neoplasia
2) Bovine type 4 (gastrointestinal tract) or type 2 papillomaviruses (bladder) plus bracken fern grazing -> tumorigenic co-factors that result in transformation to malignant carcinomas -> oesophagus or bladder
3) Bovine ocular papilloma virus, lack of pigment plus UV exposure

33
Q

Hepadnaviruses what type of virus but why different, what lead to and main disease results in

A

DNA viruses - replicate like RNA as have reverse transcriptase step
• Hepatic carcinomas
- Earlier in life infection occurs the greater the chance of developing hepatic carcinoma
- Marek’s disease of poultry

34
Q

Marek’s disease what are the 2 main clinical signs, transmission, how is oncogenes involves and control

A

Clinical signs
- Paralysis of the leg -> influx of lymphocytes into nerve sheaths of the limb
- Tumours on the neck and skin of the chicken, liver as well
Transmitted from the skin -> keratinised cells sloughed off the skin
Oncogene involved -> telomerase increase -> longevity of the tumour cells
Control of Marek’s disease
• Live virus vaccines - effectively controlled
• Vaccine strains lack the v-onc gene
- Herpesvirus of turkeys
- Attenuated live MDV

35
Q

Retroviridae structure, replication, infection length, transmission and 3 general diseases

A

• Fragile enveloped viruses, RNA, diploid (2 strands of RNA)
• UNUSAL REPLICATION -> Reverse transcriptase origin within these virus -> convert RNA to DNA
○ Not accurate, not lots of checkpoints -> high mutation and recombination rate in these viruses
• Close transmission -> intragenic, blood transfusion, biting insects (no replication purely mechanical transmission)
- vertical transmission
• Generally cause Immunosuppression, neoplasia and chronic inflammatory disease

36
Q

Replication of Retroviridae what are the 5 steps

A

1) Attachment, fusion and uncoating
2) RNA reverse transcriptase converts RNA to SSDNA
3) SSDNA then acted upon by DNA polymerase to create double stranded
- Pro-virial DNA can remain dormant within cell and continue being transcribed or replicated
4) Cellular RNA polymerase -> viral RNA
5) Packaged into virial particles

37
Q

Retroviridae Recombination why does it occur, how, the 3 types and what results in

A
  • Diploid genome allows for recombination
  • If two different retrovirus infecting same cell at the same time
    1. Recombined genome with bits of genome from either
    2. Pseudodiploid virus -> 1 RNA strand from one virus, 1 RNA strand from the other
    3. Pseudotype -> 2 copies of the original virus but packaged with the proteins from the other virus (outside appearance of one and RNA is from the other)
    May result in infection of different cells, may even infect other species
  • BROADEN HOST RANGE
38
Q

Retroviridae list 5 genera and main viruses/tumors within

A

1) Alpharetrovirus - avaian tumour viruses
2) Beta… tumors in primates and sheep
3) Gamma.. feline leukaemia virus
4) delta … bovine leukaemia virus
5) lentivirus - immunodeficiency virus (typical HIV virus)

39
Q

Retroviridae what are the 4 things you can detect for diagnosis, how and what is important to consider

A
1. Clinical signs
○ Herd / flock history
2. Detect antibody
○ ELISA
○ Gel diffusion
3. Detect viral antigen
○ ELISA
4. Detect viral RNA (replicating virus - causing disease) or proviral DNA (may not be indicative that active replication and shedding is occurring) 
○ PCR
Considerations 
- infection more common than disease as infection is for life 
- antibody commonly forms and persists
40
Q

Alpharetroviruses what is the main disease, 3 disease types and transmission

A

Avian neoplastic diseases
3 different types
1) Replication incompetent - need cells to reproduce
2) Replication competent - can infect and reproduce themselves
3) Replication competent, rapidly transforming - rapidly transform cells to become neoplastic
Transmission
• Horizontal transmission -> not very efficient but still occurs
• Vertical transmission
○ Germ line transmission or through the eggs

41
Q

Avian neoplastic diseases what age generally infected and when does shedding occur

A

Immunity & resistance -> 5-6 days old if infected develop antibody response but don’t get neoplasia
• Immunotolerance (persistent infection with +++ viral shedding) - ones that don’t detect antibodies in tests are the most at risk to be shedding the disease and spreading via horizontal routes
○ Need to detect viral RNA via PCR

42
Q

Betaretroviruses what is the main disease, clinical signs, incubation and how to eradicate

A

Jaagsiekte (ovine pulmonary adenomatosis)
- Means chasing disease -> sheep infected look like they have been chased -> loss of breath -> lungs full of tumours
- Long incubation (years)
- Multiple lung tumours -
○ Transformation of type II secretory epithelial cells -> secrete lots of viscous fluid that blocks the lungs -> drowning in own secretions
- Eradicate by removal of sick sheep and progeny

43
Q

Gammaretroviruses what is the main disease, clinicals signs, 2 outcomes of infection and diagnosis and control

A

Feline leukaemia
- Immune complex and immunodeficiency
• Two outcomes of infection
1) VN and FOCMA - develop virus neutralising antibody against FOCMA molecule and won’t develop the disease
○ If detect antibody those cats aren’t at risk for other animals
2) Persistent viraemia - fail to develop neutralising antibody - the cats that develops disease and can shed the disease
○ Detect with viral antigen or viral RNA assay
• Diagnosis and control
- Explaining to clients the risk of disease -> above which antibody or viral antigen to detect

44
Q

Deltaretrovirus main disease within transmission, clinical signs and how to eradicate

A

Enzootic bovine leukosis

  • Horizontal infection (inefficient) between cattle
  • Iatrogenic spread -> Rectal examination of cows, usage of same needle for blood sampling, same instrument for ear tattooing
  • Most subclinical- 30% lymphocytosis ○ <10% lymphoid tumours after 4 - 8 years -> primarily dairy herds as beef cattle generally don’t last as long -> decrease production
  • Eradicate by tests for Ab in sera or milk and cull positives
45
Q

Lentivirus list the 6 disease within

A

1) Maedi/Visna
2) Caprine arthritis - encephalmyelitis
3) equine infectious anaemia - life-long, jaundice, weakness,
4) feline immunodeficiency virus (FIV)
5) Bovine immunodeficiency virus
6) Jembrana disease - fatal

46
Q

Maedi and Visna what are they how come about. incubation period, transmission and immune response

A

Maedi (progressive pneumonia) -> - Proliferative lung disease -> maedi -> chronic inflammatory response -> doesn’t collapse as full of lymphocytes
Visna (wasting - infection within spinal cord) in sheep -> Demyelination, neurogenic muscle atrophy
Transmission -> respiratory and vertical transmission
- Strong immune response but not protective -> new variant by the time the antibody is developed -> virus mutation

47
Q

Feline immunodeficiency virus (FIV) where found, host, subtypes and clinical signs

A
  • Worldwide distribution
  • Domestic and other cats
  • Five subtypes (clades) identified A -E
  • Initial acute disease, many months - years later wasting, opportunistic infections, leukopenia, behavioural changes (CNS infection)
    ○ Lifelong infection
48
Q

Feline immunodeficiency virus (FIV) family and genus and diagnosis and control

A

Family: Retroviridae
Genus Lentivirus
Diagnosis and control
- Ab present in serum
- Virus in saliva (less so in semen) - tends to be intact male cats infected as they are generally more aggressive
- Vaccines recently available but probably type specific
- No human health risk identified
- Multi-cat household there is a risk so possible test and euthanise infected

49
Q

Transmissible Spongiform Encephalopathies what is it, speed of infection, clinical signs and lesions

A

• Infectious agents of uncertain structure
• Slow, progressive onset of neurological disease
○ Aggression, tremors, high stepping gait, not steady on feet, startle response to something that shouldn’t lead to that, lip licking mainly cattle, weird response in sheep when scratched
• Uniformly fatal -> once start showing clinical signs will die
• Spongiform degenerative lesions in their brain

50
Q

List 5 disease of transmissible spongiform encephalopathies

A
  1. Scrapie
  2. Bovine spongiform encephalopathy
  3. Chronic Wasting disease
  4. Transmissible mink encephalopathy
  5. Kuru, Creutzfeldt-Jacob Disease, Familial Insomnia and Gerstmann-Straussler Disease
    - Human diseases, some heredity disease other are infectious
51
Q

Transmissible spongiform encephalopathies list 8 reasons that the agent is unusual

A
  1. Filterable - like all infectious agents -> discrete particle size, not soluble
  2. No virion-like structures
  3. Highly resistant to inactivation - formalin resistant, very high level of heat
  4. No nucleic acid identified
  5. Too small to encode protein
  6. Lipid associated
  7. Scrapie associated fibrils (SAFs - common feature)
  8. Infectivity destroyed by protein disruption - some proteases - Suggest protein
52
Q

List 7 reasons Transmissible spongiform encephalopathies disease are unusual

A

1) very long incubation period
2) no evidence of inflammation
3) no apparent immune response or antibodies
4) adaption to the host species
5) effect of dose on incubation period
6) influenced by a single gene
7) strain characteristics - particular strains of scrapie have particular incubation periods and pathological lesions based on the genetics of the host (different strains of mice illicit different responses) -> suggests heritability

53
Q

Describe the 3 steps in the prion hypothesis of Transmissible spongiform encephalopathies

A
  1. Post-translationally modified variant of host’s PrP
    § Due to genetics or induced by other misfolded PrPs
  2. Promotes alterations in structure of normal PrP
  3. Propagation of altered protein folding -> what makes them resistant
    See in the brain as neurons don’t have high turnover to get rid of this prion
54
Q

List 5 reasons for The prion hypothesis with the Transmissible spongiform encephalopathies

A
  • Inability to identify nucleic acid
  • Protection of mice by deletion of PrP gene
  • Protease-resistant PrPsc induces conformation changes in normal PrP in solution (in vitro)
  • Heritable encephalopathies of humans -> genetic mutation within the protein gene
  • Scrapie lesions in mice by mutation of PrP gene BUT NOT TRANSMISSIBLE
55
Q

What is the main argument against the prion hypothesis with Transmissible spongiform encephalopathies

A

Not clear why some spongiform encephalopathies are transmissible and others are not

56
Q

Scrapie list some clinical signs and pathogenesis

A
  • Pruritus - itchiness
  • Tremors- Ataxia- Paralysis- Wasting - Subacute,
    most die in 4-6 weeks
    Pathogenesis
  • Vacuolation and degeneration of neurones of CNS
  • Hypertrophy of astrocytes
  • Other replication -> Tonsils, spleen and lymph nodes, probably in dendritic cells
  • Spinal cord -> accumulates
    ○ Ascends the spinal cord to brain
    ○ Once reach brain then get clinical signs -> long incubation period as move up neuron to neuron and then establish themselves within the brain
57
Q

Scrapie transmission, diagnosis and control

A

Transmission -> horizontally and inherited possible
Diagnosis
- animal inoculation, histopathology, detection of PrPsc in Western blots if ELISAs
Control
1) Eradication by aggressive slaughter campaigns -> Australia and New Zealand
2) Quarantine regulations - high regulated from endemic areas
3) Breeding resistant sheep -> done in UK often
○ Atypical scrapie - how behaviour, are resistant sheep now susceptible to this one

58
Q

Bovine Spongiform Encephalopathy what general lead to, clinical signs, diagnosis and control

A
  • Death in weeks to months
  • Hyperaesthetic, apprehensive, nervous, frenzied
  • Eventually ataxic, then debility, recumbency and death
    Diagnosis
  • Histopathology
  • Specific detection of PrPsc
    Control
  • Ban on feeding meat meal
  • Average age of infected cattle increased
  • Numbers of cases declined dramatically
  • Slaughter of all suspected cases
59
Q

Bovine Spongiform Encephalopathy how did it come about, transmission and incubation period

A
  • In British dairy cattle
    ○ Shift from batch to continuous processing of meat meal -> only really fed to dairy cattle
    § Associated with a few feed mills so distribution in certain areas
    ○ Lower temperatures in processing
    ○ Reduced use of lipid solvents for tallow extraction
    § Enable BSE to survive the processing
  • Little horizontal or vertical transmission
  • Incubation period of several years
60
Q

Chronic Wasting Disease what hosts, transmission and clinical signs

A
  • Mule deer and elk
  • Not food borne exposure -> unsure on transmission
  • Progressive weight loss, behavioural changes, salivation, polydipsia and polyuria