Unit One Flashcards

1
Q

Hydrogen bonds

A

Bonds between hydrogen and f/o/n of another molecule, strongest intermolecular force but weaker than intramolecular forces, give water its special properties
Bonds between different water molecules

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2
Q

Polar covalent bonds

A

When atoms of a molecule have an unequal sharing of electrons resulting in partial negative and partial positive charges
Bonds between hydrogen and oxygen of water molecules

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3
Q

Polarity

A

Unequal distribution of electrons resulting in partial positive and partial negative charges

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4
Q

Hydrophilic

A

Water loving, soluble in water, because soluble in water usually means polar

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5
Q

Hydrophobic

A

Insoluble in water, nonpolar generally because water dissolves polar things

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6
Q

Cohesion

A

The tendency of molecules to stick together, forces of attraction between molecules of the same substance

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7
Q

Adhesion

A

The clinging of one substance to another, forces of attraction between molecules of different substances

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8
Q

Surface tension

A

A measure of how difficult it is to stretch or break the surface of a liquid, how much energy it requires to expand the surface area of a liquid

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9
Q

Heat storage capacity

A

Heat is the a,punt of energy associated with the movement of atoms and molecules in a body of matter
Temperature is the intensity of heat aka the average speed of molecules rather than the total amount of heat energy
Heat storage capacity is how much heat can be absorbed without the molecule breaking apart aka basically specific heat

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10
Q

pH

A

pH stands for the potential of hydrogen, the pH scale describes how acidic or basic a solution is, 0 is most acidic, 7 is neutral, 14 is most basic, each increase by one in the scale means a decrease by the power of ten in the acidity

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11
Q

Acid

A

A compound that donates hydrogen ions to solutions, ex. HCl, acidic solutions have higher concentrations of H+ than OH-

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12
Q

Base

A

A compound that accepts hydrogen ions and removed them from solution ex. NaOH, have a higher OH- concentration than H+, basic solutions are also called alkaline

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13
Q

Buffer

A

Stabilizes the pH, minimizes changes in pH, both an H+ acceptor and donor, important in our blood because they keep it at the right pH so we don’t die.

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14
Q

Organic compounds

A

Carbon-based molecules

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15
Q

Isomers

A

Compounds with the same formula but different structures

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16
Q

Functional group

A

The first five chemical groups important in the chemistry of life, they affect a molecule’s function by participating in chemical reactions in characteristic ways, they are polar and hydrophilic, large role in water-based life

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17
Q

Carboxyl group

A

Consists of carbon double bonded to an oxygen and also bonded to a hydroxyl group. Acts as an acid by contributing an H+ to a solution and becoming ionized. Compounds with carboxyl groups are called carboxylic acids

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18
Q

Dehydration synthesis

A

Cells link monomers together to form polymers by dehydration synthesis. The reaction removes a molecule of water and combines two monomers. H+ and OH- combine and form water, covalent bond forms between the monomers too.

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19
Q

Hydrolysis

A

The reverse of dehydration synthesis, cells break bonds between monomers by adding water to them, monomers absorb water and break apart

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20
Q

Carbohydrates

A

A class of molecules ranging from the small sugar molecules dissolved in soft drinks to large polysaccharides like the swerve molecules we consume in pasta and potatoes
One monomer looks like a hexagon
Monosaccharides make up polysaccharides
Almost all are hydrophilic because of the many hydroxyl groups attached to their sugar monomers

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21
Q

Functions of carbohydrates

A

Energy source
Structure (mostly for plants)
Monosaccharides give energy
Polysaccharides store energy (starch in plants, glycogen in animals) and give structure (cellulose in plants)

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22
Q

Monosaccharides

A

The carbohydrate monomers, single unit sugars. Can be hooked together by dehydration synthesis to form more complex sugars and polysaccharides, generally have molecular formulas that are some multiple of CH2O.
Main fuel molecules for cellular work, their carbon skeletons are used as raw material for making other kinds of organic molecules

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23
Q

Disaccharides

A

Cells make disaccharides from two monosaccharides by dehydration synthesis, most common disaccharide is sucrose

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24
Q

Polysaccharides

A

Polymers of monosaccharides linked together by dehydration synthesis. May function as storage molecules or as structural compounds.

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25
Q

Macromolecules

A

Four main classes of large biological molecules are carbohydrates, lipids, proteins, and nucleic acids, on a molecular scale many of these are gigantic so they’re called macromolecules

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26
Q

Polymers

A

Cells make most of their large molecules by joining smaller molecules into chains called polymers. Long molecules consisting of many identical or similar building blocks strung together.

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27
Q

Monomers

A

Building blocks of polymers

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28
Q

Glycogen

A

A glucose polysaccharide, animals store excess sugar in the form of glycogen, more highly branched than starch, most of ours is stored in the liver and muscle, release glucose when needed

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29
Q

Starch

A

Storage polysaccharide in plants, consists entirely of glucose monomers. Coil into a helical shape, starch helix can be unbranded or branched, plants and animals need sugar for energy and as raw material for building other molecules, plant cells often contain starch granules from which they can withdraw glucose by hydrolysis

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30
Q

Cellulose

A

The most abundant organic compound on earth, forms cable like fibrils in the tough walls that enclose plant cells. Polymers of glucose, but glucose monomers linked together in a different orientation. Joined by hydrogen bonds, strong. Not a nutrient for humans, but helps digestive system health. Fiber.

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31
Q

Chitin

A

Structural polysaccharide, used by insects and crustaceans to build their exoskeleton, also found in the cell walls of fungi, humans use chitin to make a strong and flexible surgical thread that decomposes after a wound or incision heals

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32
Q

Lipids

A

Diverse compounds that are grouped together because they mix poorly, if at all, with water. Consist mainly of carbon and hydrogen atoms linked by nonpolar covalent bonds. Hydrophobic.

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33
Q

Fat

A

A large lipid made from two kinds of smaller molecules:glycerol and fatty acids

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34
Q

Structure and function of lipids

A

Glycerol bonded to three fatty acids
Stores energy
Makes up cell membranes

35
Q

Glycerol

A

An alcohol with three carbons, each bearing a hydroxyl group.

36
Q

Fatty acid

A

Consists of a carboxyl group and a hydrocarbon chain, usually 16 or 18 atoms in length, carbons in the chain are linked to each other and to hydrogen atoms by nonpolar covalent bonds, making the hydrocarbon chain hydrophobic

37
Q

Proteins

A

A polymer constructed from amino acid monomers, each protein has a unique three dimensional structure that corresponds to a specific function, important to the structures of cells and organisms

38
Q

Structure and function of proteins

A

Primary, secondary, tertiary, and quaternary structures, will discuss later
Control the rate of reactions, regulate cell process, form bones and muscles, transport substances in and out of cells, carry out many important functions especially through enzymes (speed up chemical reactions)

39
Q

Amino acids

A

Only 20, all have an amino group and a carboxyl group, both covalent lot bonded to a central carbon atom called the alpha carbon. Also bonded to the alpha carbon is a hydrogen atom and a chemical group symbolized by the letter R. Can be hydrophilic or hydrophobic, join together to form polymers.

40
Q

Peptide bonds

A

The covalent linkage between amino acids (have been joined together by dehydration synthesis)

41
Q

Polypeptide

A

A chain of amino acids

42
Q

Enzymes

A

The chemical catalysts that speed and regulate virtually all chemical reactions in cells

43
Q

R-groups

A

Side chain, differs with each amino acid, can be simple or complex, basically just a chemical group bonded to the alpha carbon in an amino acid symbolized by the letter R

44
Q

Primary structure

A

Sequence of amino acids, unique to a specific protein, determined by inherited genetic information

45
Q

Secondary structure

A

Coils (alpha helix) or folds (pleats), parts of the polypeptide coil or fold into local patterns, coiling results in an alpha helix, folding leads to a pleated sheet. Hydrogen bonds.

46
Q

Tertiary structure

A

3-D shape, globular or fibrous, results from interactions among the R groups

47
Q

Quaternary structure

A

Multiple tertiary forms “connected”

48
Q

Activation energy

A

The amount of energy it takes to get a reaction going, enzymes decrease this so they speed up the reactions

49
Q

Substrate

A

A specific reactant that an enzyme acts on, fits into a region of the enzyme called the active site

50
Q

Active site

A

Where the substrate fits into in an enzyme, a pocket or groove on the surface of the enzyme former by only a few of the enzyme’s amino acids

51
Q

Competitive inhibitor

A

Resemble the enzyme’s normal substrate, can fit into active site, reduces an enzyme’s productivity by blocking substrates from entering the active site

52
Q

Non competitive inhibitor

A

Does not enter the active site, binds to the enzyme somewhere else and its binding changes the shape of the enzyme so that the active site no longer fits the substrate

53
Q

Denaturation

A

When polypeptide chains unravel, losing their specific shape, and as a result their function. Changes in salt concentration and pH can denature many proteins, as can excessive heat

54
Q

Ideal conditions for enzymes

A

Room temperature substrate, greater surface area, high substrate concentration, neutral substrate

55
Q

Main function of digestive system and four stages

A

Food processing

Ingestion, digestion, absorption, elimination

56
Q

Ingestion

A

The act of eating

57
Q

Digestion

A

The breaking down of food into molecules small enough for the body to absorb
Food is broken down first mechanically, then chemically
The chemical breakdown of food is done through the process of hydrolysis

58
Q

Absorption

A

The cells lining the digestive tract absorb the small molecules

59
Q

Elimination

A

Undigested material passes out of the digestive tract

60
Q

Why do we need to eat

A

Food provides nutrients needed for survival

Water, vitamins, minerals, carbohydrates, proteins, fats

61
Q

Why do we need water

A

Our body is ~70% water

The chemical reactions (hydrolysis and dehydration synthesis) needed for our body to stay alive occur in water

62
Q

Why do we need fats

A

Lipids can be used as an energy source

Lipids provide insulation, cushioning, and make up cell membranes

63
Q

Why do we need carbs

A
Complex carbohydrates (whole grains, starch) are broken down over time into simple sugars
They are used to make ATP, the main source of energy in living things
64
Q

Why do we need proteins

A

They are the structural material of our bodies
They are the functional molecules that keep us alive
Our bodies only make 12 out of the 20 amino acids

65
Q

Digestive system

A

Consists of alimentary canal and accessory glands

Food is able to move through the alimentary canal by peristalsis

66
Q

Peristalsis

A

Food is able to move through the alimentary canal by peristalsis
Alternating waves of contraction and relaxation of the smooth muscle lining the canal

67
Q

Sphincters

A

Muscular ring-like valves that regulate the passage of food into and out of the stomach

68
Q

Oral cavity

A

Site of mechanical digestion and beginning of chemical digestion
Chewing = more surface area
Salivary glands secrete saliva through ducts into the oral cavity
Saliva contains the enzyme amylase, which hydrolyzes starch
Amylase begins the chemical digestion of carbohydrates

69
Q

Esophagus

A

After chewing, the tongue shapes food into a bolts and pushes it to the back of the oral cavity and into the pharynx, which opens up to both the trachea and the esophagus.
Epiglottis keeps food from going into lungs
Involuntary waves of contraction by the smooth muscles in the esophagus take over, peristalsis moves the bolts down through the esophagus into the stomach

70
Q

Stomach

A

Stomach stores food and breaks food down with acid and enzymes (pH of 2, only work in optimal conditions)
Stomach secretes gastric juices from its gastric glands (long tubular pits lined with cells that secrete different substances)
Pepsin in the stomach begins the chemical digestion of proteins

71
Q

More about the stomach

A

The activity of gastric glands is regulated by hormones
Taste/smell of food = gastric juices
Food in stomach = release of gastrin
Gastrin = gastric juices
Too much acid = inhibits release of gastrin

72
Q

Chyme

A

An acidic, nutrient rich mixture of food and enzymes

73
Q

Pyloric sphincter

A

Regulates the passage of chyme from the stomach to the small intestine

74
Q

Small intestine

A

The rest of the digestion of molecules occurs in the small intestine
The nutrients that result from digestion are also absorbed here
The pancreas and liver contribute to digestion in the small intestine
The pancreas secretes pancreatic juice
The liver produces bile, which is stored in the gall bladder, then secreted into the small intestine

75
Q

Why is bile important

A

Contains bile salts

Bile salts emulsify fats, making them more easily accessible to lipase

76
Q

Small intestine

A
All four types of large macromolecules are digested in the small intestine
Pancreatic amylase is carbs
Bile salts and lipase in fats
Nucleases is nucleic acids
Other is proteins
77
Q

More surface area

A

More absorption

78
Q

Circular folds, villi and microvilli

A

Go to each other, microvilli is what absorbs the nutrients

79
Q

Small intestine

A

Fatty acids and glycerol are absorbed by the epithelial cells, recombine into fats, then are transported into a lymph vessel
Amino acids and sugars pass through the int spinal epithelium and then across the thin wall of the capillaries, making their way into the blood stream
Nutrient rich blood then goes to the liver

80
Q

Liver

A

Gets first access to the nutrients absorbed from a meal
Removes excess glucose from the blood and converts it to glycogen
Converts nutrients into new substances (ex. synthesizes proteins from amino acids)
Converts toxins into inactive products
Produces bile

81
Q

Large intestine (aka colon)

A

Main function of the colon is to absorb excess water
About 7 liters of fluid enters the digestive tract each day, about 90% of this water is absorbed back into the blood and tissue fluid
As water is absorbed, the remains of digested food become more solid as thy move through the colon by peristalsis
Waste products, stored in rectum, elimination

82
Q

Order of digestive system

A

Oral cavity, esophagus, stomach, small intestine, liver, large intestine

83
Q

Three main accessory glands in the human digestive system

A

Salivary glands, pancreas (produces enzymes), and the liver