Unit 4 AOS 2 Flashcards
What is food needed for in the body
energy, growth, regulating body processes
What are the major food groups needed for the body
proteins, carbohydrates, fats and oils, vitamins and minerals
What are proteins needed for
growth, repair, immunity, transport of molecules,
Examples of what proteins are used for
hormones, enzymes, cellular structures (e.g. cell membrane, muscles), to transport molecules in the body, antibodies
What are carbohydrates needed for
to store and provide energy, functioning in nervous system
What are fats and oils needed for
insulation, to store some vitamins, to provide energy, in cell membranes
Define proteins
large molecules composed of one or more long chains of amino acids.
What are the monomers of proteins
amino acids
How many amino acids are there in the body
20
Can all these 20 amino acids be made by the body
no
How do we get amino acids that can’t be made in our body
through our food
What are essential amino acids
amino acids that cannot be synthesised by animals from materials in their diets and therefore must be supplied directly in the diet.
What elements make up amino acids
C, H, O, N and sometimes S and P
What are the amino acids used to synthesise proteins in the body called
2-amino acids or alpha amino acids
What is the structure of amino acids
CH, R, COOH, NH2
What properties can the R chain have
polar, non-polar, acidic or basic
Are amino acids soluble and why
they are soluble as they can form H bonds with water
Can amino act as acids, bases or both
both
What can amino acids act as
dipolar ions/zwitterions
What is a zwitterion
contain equal positive and negative charges
What does an amino acid look like as a zwitterion
NH3+ and COO-
When does an amino acid act as a zwitterion
pure solid state and in aqueous solutions in neutral pH, e.g. water
What will happen to amino acid in acidic environment
will act as base and so will have NH3+ with COOH
What will happen to amino acid in basic environment
will act as an acid and so will have NH2 and COO-
What is a sequence of amino acids called
a peptide chain
Between what molecules is the bond in a peptide chain
between the CO and the NH2 (O=C-N-H)
What is the bond in a peptide chain called
peptide bond
What is the name of the link between the C and the N
amide linkage
When is a polypeptide called a protein
more than 50 amino acids/ molar mass >5000gmol-1
How do you name a polypeptide (3)
by the sequence of amino acids from which they are made - which amino acid it derived from and put the abbreviation and then just put a dash to the next one, and it is written from left to right
Where is the N-terminus in a polypeptide chain
left side
Where is the C-terminus in a polypeptide chain
right side
What is the amino acids components of a polypeptide called
amino-acid residue
Define polypeptide
many amino acid residues bonded together.
Define primary structure
the order of amino acids in a polypeptide chain
Define secondary structure
structure formed folding of the polypeptide chain due to hydrogen bonding between carboxyl and amino groups in a protein molecule.
Important to note about secondary structure
the hydrogen bonding is at different positions of the chain
What causes alpha helices
H bonding between partially partially positive NH group and the partially negative COOH
What causes beta pleated sheet
H bonding between peptide links
Define tertiary structure
3D structure formed from side-group interaction, including hydrogen bonding, ionic bonding, dipole–dipole interactions and disulfide bridges
Define quaternary structure
multiple polypeptide chains joined together
Define denaturation
loss of structure or function of a protein
What causes denaturation
pH changes and heat
Why do pH changes and heat cause denaturation
damages bonds in polypeptide
Can denaturation be partial + why
yes if it doesn’t break primary covalent (peptide) bonds but just secondary and tertiary bonds e.g. warm milk
Define enzymes
biological catalysts that speed up reactions through providing an alternate pathway for the reaction which requires less energy
What is the general suffix of enzymes
ase
Examples of enzymes that don’t end in ase
trypsin, pepsin
What are the two types of proteins
globular and fibrous
What is the solubility of globular/fibrous
globular is soluble and fibrous is insoluble
What is the lock and key model
the specific shape of the active site fits exactly the shape of the substrate it will act on, hence will only act on that substrate.
What is the induced fit model
the specific shape of the active site of the enzyme varies slightly from that of the substrate and the two fit only after contact when the substrate induces a complementary shape at the active site of the enzyme.
Define active site
A region on an enzyme that binds to a protein or other substance during a reaction.
Define substrate
The substance on which an enzyme acts.
Do enzymes take part in a reaction
no
Define coenzyme
organic non-protein molecules required to temporarily and loosely bind with the protein molecule to form an active enzyme.