S4 old Q Flashcards

1
Q

Production and assembly of collagen fibrils by local cells

A

syn of pro alpha chain
hydroxylation of lysine and prolines and self assembly of the B pro alpha chains with H bonds for stability
procollagen triple helix formation
packing of pro collagen in to secretory vessicle and secrtion
cleavage of propeptides and to collegen molecules and self assembly into fibreils

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2
Q

how does increase in lox expression in cancer cells contribute to cancer progression

A

Lox catalyzes aldehyde formation on lysine residues of collagen precursors
highly reactive so forms linkages with eachother and corsslinks collagen to increase stiffeness of ECM which makes cancer cells escape and metastizie

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3
Q

integrin receptor structure and activation

A

transmembrane heterodimers composed of alpha and beta subunits with ligand bindng, head, and tail domains
outside in activation
inside out activation

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4
Q

outside in activation of integrin

A

ligan binds to outside on head domain of hterodimers in ecm

conformational change that exposes talin binding site (beta subunit) talin binds and actin assembles

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5
Q

inside out activation of integrins

A

talin activated by PIP2 intracellularly
talin binds to beta subunit
confromational change
RTK +GPCR extracellular signals

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6
Q

how do integrin recpetors generate signaling complexes that regulate cell functions

A

through the outside in method of activation talin becomes bound
talin exposes FAK binding site
FAK recruited, clusters and cross phosphorylate each other at Tyr residues
phosphorylated FAK generates phosphorylated binding sites for other signaling molecuels
signaling cascades for cell survival, growth, organization

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7
Q

2 biological functions of basement membrane

A

mechanical support: connects epidermis to dermis

Selective Filter: prevents fibroblasts from contacting epithelial cells but allows immune/nerve cells access

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8
Q

in vivo stem cell experimetn

A
Cre to study SC lineage
Rosa26-stop-lacz
BSC-GFP-CRE
cross above
BSC will express GFP/Lacz 
cell tracked and imaged from liverr in immuno prep
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9
Q

Advantages of patient iPS cells

A

autologous so no rejection

no ethical concerns

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10
Q

disadvantages of patient iPS cells

A

low efficacy
concern for tumors
incomplete programming

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11
Q

two critical tests showing that cells are ready for transplantation in vitro

A

cell sort to see if youre getting cells

screen for tumor forming

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12
Q

critical and efficacy data that you need to provide the FDA

A

saftety data: mortatlity rate, severe bodily effects on organs/fucntions
efficacy data: any off target side effects, how the effective treatment was at improving the number of insulincytes or diabetic symptoms (dose dependence)

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13
Q

phase 1 trial primary and secondary measures

A

primary is saftety of transplant in patient

secondary is efficacy as a treatment and off target effects

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14
Q

2 diffferences btwn phase 2 and phase 3

A

phase II uses larger group than PI but PIII useus massive group from larger area
P2 is looking at general efficacy of the treatment, but phase III looks at collective efficacy and safety in a large population

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15
Q

For BTK why would only the A form of G6PD be expressed in B cells

A

BTK gene is specific for B cell maturation and a defect in BTK will result specifically in B cell development arrest

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16
Q

how to tell which marker is closest linked

A

i think highest numbers

17
Q

how to tell most likely distance of said marker

A

highest number score

18
Q

how to tell if autosomal recessive

A

horizontal pattern?

meaning 1/4 per gen ish

19
Q

how to tell if not autosomal recessive?

A

idk

20
Q

how to tell if not dominant

A

two unaffected/carriers can have an affected

21
Q

how to tell if dominant

A

vertical pattern whear more than one per gen has it

22
Q

how to tell if not x linked recessive

A

x linked traits are only passed to males from moms because dad gives Y