Proteins Flashcards

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0
Q

Proteins are made from (6)

A
  • Carbon, hydrogen, oxygen, nitrogen and occasionally sulfur
  • Polypeptides that make up the protein are synthesised on the ribosome while they are assembled into proteins when released int o the cytoplasm
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1
Q

Functions of proteins (5)

A
  • They are structural components
  • They are membrane carriers and pores
  • All enzymes are proteins
  • Many hormones are proteins
  • Antibodies are proteins
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2
Q

Excess amino acids in mammals (3)

A
  • Too many amino acids can be toxic
  • The process of removing the amino group is called deamination
  • Amino acids are converted to urea and excreted as piss
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3
Q

Amino acids (4)

A
  • All amino acids have the same structure with a carboxyl group at one end an an amino group at the other end
  • The R-group determines the amino acid
  • R-groups can be negatively or positively charged while others are hydrophobic or hydrophilic
  • The monomeric unit for a protein
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4
Q

Condensation reaction

A

When the amino group of one amino acid bonds with the carboxyl group of another forming a peptide bond while losing a water molecule

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5
Q

Hydrolysis

A

The splitting of a bond with the use of a water molecule

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6
Q

Essential amino acids

A

Amino acids that animals cannot build from materials that they take into their body

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7
Q

Dipeptide bond

A

The bond between two amino acids

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8
Q

Proteins and polypeptides are made on the…

A

Ribosomes

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9
Q

Primary structure (3)

A
  • The unique amino acid sequence of a protein
  • Held by Peptide bonds
  • Folds over to form secondary structure
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10
Q

Secondary structure (3)

A
  • The coiling and pleating of parts of the polypeptide molecule
  • Forms an alpha helix or a beta pleated sheet
  • Held by H-bonds
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11
Q

Tertiary structure (3)

A
  • The globular structure of a protein
  • Made from folded over alpha helices and beta pleated sheets
  • Held by disulfide bridges, ionic bonds, H-bonds and hydrophobic interactions
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12
Q

The importance of maintaining tertiary structure (3)

A
  • Tertiary structure is vital for the proteins function
  • Hormones have to be a specific shape to fit hormone receptors
  • Enzymes have specifically shaped active sites for substrates to fit in
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13
Q

Effect of an increase in heat (3)

A
  • As heat increases, the molecule gains KE
  • The molecule vibrates and breaks H-bonds breaking the structure
  • With the shape of the active site changed, the enzyme cannot function
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14
Q

Effect of an increase in pH (3)

A
  • As the pH deviates from 7 the concentration of H+ ions increase
  • Some H-bonds and ionic bonds are broken as the electrostatic attraction is too great
  • The shape of the active site is changed as tertiary structure is lost
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15
Q

Hydrophilic R groups

A

Water soluble as water molecules can cluster around it

16
Q

Hydrophobic R groups

A

Are water insoluble as they turn inwards away from the water source

17
Q

Globular proteins (4)

A
  • Roll up to form a ball
  • Usually soluble
  • Usually have metabolic roles
  • Examples include enzymes, antibodies and plasma proteins
18
Q

Fibrous proteins (4)

A
  • Form fibres
  • Usually insoluble
  • Usually have structural roles
  • Examples include collagen in cartilage and keratin in hair
19
Q

Quaternary structure (2)

A
  • Only some proteins have quaternary structure
  • Proteins can have quaternary structure if they have a prosthetic group or more than one polypeptide subunit joined together
20
Q

Haemoglobin (6)

A
  • Consists of two alpha chains, two beta chains and four haem rings
  • Carries O2 and CO2
  • Haem gives haemoglobin its colour
  • Globular
  • Has quaternary structure as it has multiple polypeptide sub units and a prosthetic group
  • Soluble
21
Q

Collagen (6)

A
  • Transport protein
  • Fibrous protein
  • Made up of three polypeptide chains
  • Hydrogen bonds between each polypeptide chain gives the protein its strength
  • Each collagen makes staggered covalent bonds with other collagen molecules
  • Insoluble
22
Q

Functions of proteins (5)

A
  • Prevents artery walls from bursting
  • Provides a strong connection that allows muscles to pull bones for movement
  • Bones are made from collagen
  • Cartilage an connective tissues are made from collagen
  • Collagen can be injected to revive skin conditions
23
Q

Haemoglobin (6)

A
  • Consists of two alpha chains, two beta chains and four haem rings
  • Carries O2 and CO2
  • Haem gives haemoglobin its colour
  • Globular
  • Has quaternary structure as it has multiple polypeptide sub units and a prosthetic group
  • Soluble
24
Q

Collagen (6)

A
  • Transport protein
  • Fibrous protein
  • Made up of three polypeptide chains
  • Hydrogen bonds between each polypeptide chain gives the protein its strength
  • Each collagen makes staggered covalent bonds with other collagen molecules
  • Insoluble
25
Q

Functions of proteins (5)

A
  • Prevents artery walls from bursting
  • Provides a strong connection that allows muscles to pull bones for movement
  • Bones are made from collagen
  • Cartilage an connective tissues are made from collagen
  • Collagen can be injected to revive skin conditions
27
Q

What makes collagen so strong (7)

A
  • Every third amino acid is glycine in the polypeptide chain
  • Glycine is a small molecule so they can be tightly bound
  • The chains are held together by H-bonds
  • Each collagen molecule forms covalent bonds called cross links with neighbouring molecules
  • The cross links are staggered along the collagen molecule to prevent lines of weakness
  • Their result is a structure called a fibril
  • Many fibrils together fomr a fibre
28
Q

The Biuret Test (5)

A
  • The Biuret test is the test if a sample contains proteins
  • Add sodium or potassium hydroxide to the sample
  • Add copper sulfate and leave for 5 minutes
  • Polypeptides present -> purple
  • Polypeptide not present -> blue
29
Q

Antibodies (4)

A
  • Globular
  • Identifies and neutralises pathogens
  • Binds onto the antigens of pathogen by the lock and key hypothesis
  • Tags pathogens so they can be englufed by phagocytes
30
Q

Actin and Myosin (3)

A
  • Fibrous
  • Myosin converts chemical enrgy into mechanical energy in the form of ATP
  • Actin form thin filaments that transmit force generated by myosin to the end of the muscle
31
Q

Insulin (2)

A
  • Blobular
  • Regulates carbohydrate and fat metabolism by causing cells to absorb more glucose from the blood and converts it to glucagon
32
Q

Monomer

A

A single molecule that can combine to make a long chain of monomers called a polymer

33
Q

Which enzymes digest proteins?

A

Trypsin

Chyrotrypsin

34
Q

Effect of heat on proteins

A
  • Molecules gain KE as heat increases
  • Molecules vibrate more vigorously causing ionic and hydrogen bonds to break
  • Protein loses secondary and tertiary structure so is therefore denatured