Protein Flashcards
Zwitterion
No net charge
Amino acid sequence
Peptide bonds + H20
Polypeptide
Psi bond
Calpha - carbon
phi bond
C alpha - N
Isoelectric point
pH at which zwitterion exists
Alpha helix
Right handed helix
Compact
Can exist as one strand
Side chains outside
Beta sheet
Extended
R groups on both sides
Need to have more than 1 strands
3 types: Antiparallel - less stable , parallel
Fibrous protein
Used to : support, shape, protection
Structure: long strands, sheets, simple
Secondary structure - 1 type that repeats
Example- collagen
Globular proteins
Used In catalysis and regulation
Compact shape
Several types of secondary structure
Example:carbonic anhydrase
Motifs
In beta sheet folding elements that contain 1 or more elements of the secondary structure
Domains
Region of a polypeptide that fold into a specific shape for a functional role
Disulphides bonds
Between cysteine residues
Oxidation reaction
Chaperones
Aid folding
Enzymes
Biological catalysts Not used up - reusable Alternate pathway requiring lower activation energy Does not affect equilibrium Specific
Active site
Hydrophobic cleft excluding water