Intro to DNA Flashcards

1
Q

Difference between DNA and RNA

A
DNA is double stranded
Requires DNA polymerase 
Thymine
Histone 
Stable 
Within nucleus 

Euchromatin - less coiled (white) - beads on a string
Heterochromatin - more coiled - not expressed - solenoid

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2
Q

Solenoid

A

30nm length

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3
Q

Nucleoside

A

Base and sugar

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4
Q

Pyrimidine

A

Thymine and cytosine

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5
Q

Nucleotide bonds

A

Phosphodiester bond

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6
Q

Secondary structure of DNA

A

Hydrogen bonds

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7
Q

DNA Strands

A

Complimentary

Antiparallel

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8
Q

Meiosis vs mitosis

A

Mitosis is cell division for somatic cells
1 cycle
Produce 2 diploid cells (identical)
Cell replacement
Prometaphase - spindle fibres attach to kineticore which is attached to the centromere
No crossing over
No random assortment

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9
Q

Meiosis

A

4 haploid cells
2 rounds

Prophase 1 - crossing over as chiasmata (bivalent)
Metaphase 1 - homologous chromosome align at metaphase plate forming a tetrad - random assortment
Anaphase 1- disjunction
Telophase 1 - 23 chromosomes in each cell

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10
Q

Endogenous mutations

A

Free radicals
Transposable elements
Replication errors

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11
Q

Bulky adduct

A

Bulky chemicals added on

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12
Q

Intercalating agents

A

Chemicals that from between bases which interfere with translation and transcription

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13
Q

Interstrand cross links

A

Physically link the 2 DNA strands interfering with DNA replication

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14
Q

Apurinic site

A

Complementary base lost

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15
Q

Deamination

A

C — U

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16
Q

DNA exonuclease

A

Reverse polymerase

3 prime to 5 prime

17
Q

Backwards slippage

A

New strand loops out
New strand is one nucleotide longer
Insertion
Slows down

Huntington’s
Fragile X
Spinocerabellar ataxia

18
Q

Forward slippage

A

Template strand loops out
New strand is one nucleotide shorter
Deletion
Replication speeds up

19
Q

DNA damage too high

A

apoptosis
Cell cycle transition stoppped
Senescence - permanent cell cycle arrest

20
Q

Base eviction repair

A

Uracil detected where it shouldn’t be

Removed so nucleotide is baseless
Baseless nucleotide removed
Hole filled with complementary correct nucleotide - DNA polymerase
Ligase seals DNA

21
Q

Nucleotide excision repair

A
Pyrimidine dimers detected 
Surround DNA opened to form a bubble 
Enzyme cuts out damaged region 
DNA polymerase replaces the DNA lost
Ligase seals
22
Q

Non homologous ends joining

A

Bind broken ends together using ligase

May clause mutation as DNA needs to be cut for DNA ligase to work

Ends protected

23
Q

Homologous directed repair

A

Use sister chromatids or homologous chromosome

Perfect repair

Damaged chromatid invades sister chromatid
Cut region make a copy

Regions - Holliday junctions