Molecular Genetics Patterns Flashcards

Combo of Pintar and Millonig Lectures (I and II)

1
Q

Name the 5 Major Developmental Signaling Pathways

A
  1. TGF-b (Transforming Growth Factor)
  2. FGF (Fibroblast Growth Factor)
  3. SHH (Sonic Hedgehog)
  4. Wnt
  5. RA (Retinoic Acid)
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2
Q

What type of signalling pathway does TGF-b normally use? Notable examples include; Nodal and BMP, which antagonizes Nodal.

A

Typically use Threonine-Serine Kinase Dimers (Thr-Ser)

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3
Q

Smads promote _____ Signaling

A

TGF-Beta

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4
Q

To antagonize TGF-B pathways, you can either block the receptor OR you could target the typical ligand dimers. Name three notable examples of BMP-4 (tgf-b path) Antagonists.

A
  1. Chordin
  2. Noggin
  3. Lefty
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5
Q

What type of signaling do FGFs typically use?

A

Tyrosine Kinases

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6
Q

How does Syndecan activate FGF signalling?

A

Two or more GAG monomers link onto Tyrosine kinases to make activated dimers.

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7
Q

The gene “Nodal” , which induces the anterior visceral endoderm (AVE), falls under what Signaling Family Peptides?

A

TGF-Beta

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8
Q

For the primitive streak to occur, the widespread BMP-4 must be _____ by chordin and noggin

A

Inhibited

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9
Q

Two major functions of FGF of embryo development (14days)

A
  1. Induces Nodal (left/right sidedness)
  2. Promotes chordin and nogging (bmp-4 inhibitors)
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10
Q

Too much retinoic acid wrecks the development of the ____ part of the body

A

Posterior; diagram shows legs

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11
Q

To further the Rostral-Caudal axis, Retinoic Acid engages in two “Tug of wars” with what other family class? Who wins where?

A

FGF
RA wins in Anterior
FGF wins in Posterior

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12
Q

3’ hox genes form more ____ structures, whereas 5’ hox genes from more ____ structures. (Anatomical Positioning)

A
  • Anterior
  • Posterior
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13
Q

Why does too much RA result in posterior malformation?

A
  • RA inhibits FGF
  • FGF promotes 5’ Hox Genes
  • 5’ regulates Posterior Structures
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14
Q

The ____ DNA sequences consists of 3 alpha helixes and always binds to the DNA

A

Homeobox

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15
Q

5’ end of Hox genes encodes which anatomical portion?

A

The Posterior

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16
Q

Orthologous Genes

A

Homologous genes between different species

17
Q

Paralogous Genes

A

Homologous Genes within a species

18
Q

Loss of function mutations (knockouts of Hox genes) often lead to which anatomical transformation?

A

Anterior Transformation

19
Q

Gain of function mutation often lead to what type of anatomical transformations

A

Posterior Transformations

20
Q

What are the Otd, and Otx1/Otx genes responsible for?

A

Forming Anterior (head/brain) structures

21
Q

What are the two transcription factors that are sufficient and necessary to completely remodel the transcriptional profile of stem cells?

A

OCT4 and NANOG