Module 12 Flashcards

1
Q

Molecular and Genetic Epidemiology

A

Used for figuring out how genes interact with environment to influence disease risk and outcome

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2
Q

Genetic epidemiology (definition)

A

Seeks to unravel the role of genetic factors and their interactions with environmental factors in the etiology of diseases, using family and population study approaches

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3
Q

Genetic epidemiology answers:

A
  1. Does a disease cluster in families?
  2. If so, is that clustering likely a result of shared non- genetic risk factors?
  3. If the clustering is not accounted for by shared lifestyle or common environment, is the pattern of disease consistent with inherited effects?
  4. If so, where is the putative gene?
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4
Q

Epidemiological assessment of clustering

A
  • Case-control study
  • Comparison of the frequency of a positive family history
  • Expectation under genetic influence
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5
Q

Twin studies (natural experiment)

A

Greater concordance (for dichotomous traits) or correlation (for continuous traits) for MZ than DZ twins is evidence of a genetic influence

  • Monozygotic (MZ) twins are genetically identical
  • Dizygotic (DZ) twins share, on average, the same proportion of genes as siblings
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6
Q

Linkage analysis

A

Tracks region of DNA that is transmitted from parents to offspring in the same manner as the disease/outcome of interest

  • works well for diseases that follow simple rules of inheritance (e.g., autosomal dominant or recessive).
  • Linkage does not mean causality
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7
Q

Segregation analysis

A

Tests whether the observed pattern of disease in families is compatible with Mendelian model of genetic inheritance
Performed by statistically testing competing models

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8
Q

Complex diseases

A

Ones for which the genetic influence may be modest and environmental factors contribute to disease risk.
– Examples: Cancers, heart disease, AD
*Segregation analysis is not typically done for “complex diseases

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9
Q

Dementia

A

Collection of clinical symptoms of intellectual impairment (can be reversible, treatable)
Causes: AD, stroke, depression, trauma, medication

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10
Q

Alzheimer’s disease

A
  • Progressive, neurodegenerative disease of the brain
  • Impairment of cognitive and memory functions
  • Changes in mood, personality, and behavior
  • Risk factors: Age, Family history, Genetics
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11
Q

Management implications of AD

A

– Number of dementia cases expected to increase dramatically as population ages.
– Increased demand on healthcare system

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12
Q

Molecular epidemiology

A

Use of epidemiologic methods and techniques of molecular biology

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13
Q

Molecular v. Genetic Epidemiology

A
  • Overlap between molecular epidemiology and genetic epidemiology when genes are involved in disease/exposure association
  • Molecular epidemiology does not involve studies of biologically-related individuals
  • Molecular epidemiology evaluates association of variation in known genes with disease risk
  • Genetic epidemiology identified unknown genes that influence disease risk
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14
Q

Biomarkers

A
  • A cellular or molecular indicator of exposure or health effect
  • Identified from biologic specimens (blood, sputum, urine, tissue, etc)
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15
Q

Benefits of molecular epidemiology

A

– Greater precision in estimating exposure- disease associations
– Provide early warnings for disease by flagging preclinical effects of exposure
– Identifies level of exposure based on relevant biomarkers for particular diseases/health conditions

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16
Q

Common Diagnostic Molecular Assays

A

Pulsed-Field Gel Electrophoresis (PFGE)
- Subtyping
- Genotyping
Polymerase Chain Reaction (PCR)

17
Q

Pulsed-Field Gel Electrophoresis (PFGE)

A

‘Gold Standard’ for molecular subtyping/genotyping microorganisms

  • Compare bands of DNA sequences in gel plates
  • Banding patterns analyzed by software to determine degree of relatedness between isolates
  • Commonly-used to detect outbreaks (food-/water- borne, nosocomial)
18
Q

Polymerase Chain Reaction (PCR)

A
  • Type of nucleic acid amplification test (NAT)
  • Uses enzymes to digest and ‘grow’ DNA/RNA segments
  • Analysis of sequences allows for comparison to other isolates
19
Q

Use of PCR

A

– Early detection, confirmatory testing
– Detection of emerging/novel pathogens
– Outbreak investigation