Microbiology Flashcards
How is the prokaryote chromosome like?
Single, super-coiled, double stranded closed circular
Which eukaryote has cell wall? What is it known as?
Fungi
Sterols
How do prokaryotes divide?
Which organism is particularly slow to grow?
Binary fission.
TB.
What is the role of gyrases? Which antibiotic class target this?
Relieves unwinding stress.
Quinolones.
Does nucleoid have a nuclear membrane?
No
What 2 compounds are found in the peptidoglycan as repeated polysaccharide structure?
NAM and NAG
Which antibiotic class target the cell wall?
Are they bacteriostatic or bactericidal?
B-lactams (Penicillin, Cephalosporins) and Glycopeptide
Bactericidal
What is the cell wall like in gram-positive organisms?
THICK MULTI-layered peptidoglycan with glycolipids
What is the cell wall like in gram-negative organisms?
LPS at the outermost surface followed by outer membrane then thin peptidoglycan layer followed by inner membrane
Which layer of cell wall is responsible for endotoxin?
This is found in gram-___?
LPS - antigenicity, pro-inflammatory.
Gram Negative.
What charge does LPS give the cell membrane?
Negative due to phosphate groups
What are the 3 arrangements of proteinaceous extensions?
Monotrichous, Lophotrichous, Peritrichous
Rotary movement of flagella is?
Is the flagella antigenic?
H+ dependent.
Yes.
What is the fimbriae/ pilli involved in? (3)
Surface attachment/ biofilm formation
Horizontal DNA transfer
Mobility (not for gram-neg)
What is the sequence to identify the 16s rRNA in mRNA?
Shine Dalgarno sequence
Is the prokaryotic mRNA polyadenylated?
No
Since there is no golgi apparatus in prokaryotes, which organelle processes proteins?
Cytoplasmic membrane
How do transcription and translation occur in prokaryotes?
Simultaneously
What kind of prokaryotes grow best at 37 deg?
Mesophiles
What pH range and osmolarity is ideal for human commensals?
pH6.8-7.2.
0.85% NaCl
Does heterotrophs or autotrophs require carbon source to be provided?
Heterotrophs
What respiratory method does facultative anaerobes use?
Preferentially uses O2 as terminal electron acceptor but able to switch
What respiratory method does aerotolerant anaerobes use?
Anaerobic metabolism.
Just able to tolerate O2
What is the difference between obligate anaerobes and capnophillic organisms in the presence of O2?
Obligate anaerobes are killed in O2
Capnophiles not necessarily
Are obligate anaerobes or aerobes able to generate more ATP?
Obligate aerobes as O2 has higher reductive potential than nitrates/ sulfates
What are the 4 phases of growth in prokaryotes?
Lag
Exponential/Log
Stationary/ Plateau
Death/Decline
What are chains, clusters, rod, curved rod morphologies called?
Chains - cocci
Clusters - coccus
Rod - bacillus
Curved rod - Vibrio
What is the difference between a Spirillum and Spirochaete?
Spirillum - rigid spiral bacterium
Spirochaete - flexible spiral bacterium
How does spiral bacteria move?
What kind of solution can they move better in?
Cock-screw movement.
Viscous solution such as saliva and semen
How does fusiform bacteria look like?
Elongated and slender with tapered ends
What is the 2nd most common cause of sore throat?
Fusiform
What characteristics does a capsule provide a bacteria with? (3)
1 example of a bacterium with capsule
Phagocytosis protection, Virulent, Part of biofilm
Klebsiella pneumoniae.
What are spores? When do they form?
What is term for when a spore becomes active again?
1 example of a bacterium that produces spore.
Inert structures resistant to physical and chemical challenge.
Forms when cells cannot grow due to stressors.
Germination.
C. Difficile
It is the retention of which solution (2) in what structure that gives gram positive its colour?
What colour is it?
Crystal violet, Iodine (mordant)
In thick peptidoglycan.
Purple.
What colour do gram-negatives stain? What is it stained by? (2)
Pink.
Safranin Pink or Basic Fuchsin (Counter-stain)
What is used as the decolouriser in gram-staining?
Ethanol
Which organisms (2) shows gram-variability? Due to?? What stain should be used then?
M. tuberculosis due to waxy, lipid-rich cell wall thus stain not taken up well.
Use Acid-fast (Ziehl Neelson) stain
Spirochaete as it is too thin to take up crystal violet.
Use silver impregnation.
What component in the mannitol salt agar preferentially selects for what kind of bacteria?
7.5% salt.
For Staphylococci.
Salmonella-Shigella agar contains what to inhibit what organisms?
Contains bile salts to inhibit coliforms
What is the difference between a selective and differential media?
Selective - select/ permit growth of 1 organism over another
Differential - producing visible changes in colonies for identification
What does MacConkey agar help to identify? What is the colour?
What are the 2 inhibitors in it and what does it inhibit?
Enterobacteriaceae - turns neutral red to pink from fermenting lactose.
Contains bile salts and crystal violet to inhibit gram negative enteric bacilli.
What does eosin-methylene blue media inhibits?
What does it differentiate and how?
Inhibits gram positives.
Lactose fermenters: Produce acid and absorbs dye -> Purple black (Or metallic green sheen for E.Coli)
Non-lactose fermenters: Protein deamination -> increase pH -> dye not absorbed -> colourless
What colour does E.Coli produce in the eosin-methylene blue media?
Metallic green sheen
What bacteria is blood agar specifically used to identify? On the basis of what?
Streptococcus spp.
Via haemolysis
What are the 3 types of haemolysis on a blood agar and what are their colours?
a (incomplete) - greenish discolouration around colonies (Hb oxidation to MetHb by H2O2)
B (complete) - Yellow and complete clearing around colonies due to streptolysin
y - no change, no haemolysis
Which lancefield groupings show B-haemolysis and which show y-haemolysis?
B: A (S. pyogenes), B, C (Large pyogenic or small colonies), F, G
y: D
What organism produces endotoxin and what produces exotoxins?
Endotoxin - Gram neg (from LPS)
Exotoxin - Gram Pos
Which bacteria is coagulase positive?
S. Aureus
Which bacteria hydrolyses lipid?
Clostridia spp.
What is the difference between polyclonal and monoclonal Ab?
Polyclonal - to a specific microbe/ virus
Monoclonal - to specific component
Slide agglutination reactions show that what is present?
What kind of tests are these?
Antigens (sample) to a particular anti-sera (from lab).
Serological tests.
What are the 4 stages of PCR?
Denaturation of DNA
Annealing of primers to target
Extension via polymerase
Amplification
What kind of rRNA is high conserved (evolves slowly) and varies between strain?
Thus can be ribotyped
16S rRNA
What is needed to interpret the mass spectrum result produced from a MALDI-TOF?
A reference library to compare
What is microbiome?
Study of genetic material of all microbes living on/ inside the human body
What does virulence mean?
Capacity of microbe to cause host damage
What are the terms used to describe an endogenous organism with a mutualistic relationship with the host that limits threat from exogenous pathogens?
Commensals/ Symbiotic relationship
What are organisms that cause infection when there is a change in natural immunity (E.g. Immunocompromised)?
Are these usually endo or exogenous?
Opportunistic pathogens.
Endogenous.
What are organisms growing in culture by accident known as?
Contaminant
What organism (and what kind) causes thrush in the throat/ GU tract or skin? When does this occur?
Candida, a fungi.
Immunocompromised state.
How do yeast (fungi) multiply?
Budding
What does the tip of true hyphae contain?
Proteases to break surfaces
What is a common mould (fungi) that infects the immunocompromised?
Aspergillus spp.
What are organisms causing Malaria, E. histolytica and cryptosporidiosis called?
Protozoa
How does Neisseria meningitidis and neisseria gonorrhoeae appear in microscopy?
Gram-negative diplococci growing intracellularly
A pink diplococci bacteria that grows intracellularly is seen on microscopy.
What are the 2 possible bacteria?
Neisseria meningitidis
Neisseria gonorrhoeae
What are 4 gut commensals (Coliforms)?
Most E.Coli
Klebsiella
Enterobacter
Proteus
Salmonella, Shigella and E.Coli O157 (Coliforms) causes pathology where?
GI
Coliforms are gram?? Morphology?
Gram negative bacilli
What are Gram negative bacilli from the normal bowel flora called?
Coliforms
What is the 1st line abx used to treat coliforms?
Route of administration and 1 potential side effect?
Gentamin.
IV, Nephrotoxic.
What is the exotoxin superantigen produced by S. Auerus?
TSST-1
What could adversely happen when a coliform dies?
Endotoxin will be released from the cell wall (LPS) causing inflammation and sepsis