Lecture 30 - Oxidative Phosphorylation: ATP synthase Flashcards

1
Q

What is the proton-motive force (pmf)?

A

A force created across the inner mitochondrial membrane from the proton gradient

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2
Q

What 2 energetic gradients create the pmf?

A
  1. A chemical gradient or pH gradient due to different H+
    concentrations on either side of the membrane
  2. An electrical gradient due to the charge difference across
    the membrane (positive in the intermembrane space,
    negative in the matrix)
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3
Q

What type of gradient is the pmf?

A

Electrochemical

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4
Q

What happens when mitochondria are isolated from cells and have the outer membrane removed?

A
  • Electron transport chain still works
  • But ATP is not made
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5
Q

What is Bacteriorhodopsin?

A

A light inducible proton pump (pumps protons to make a proton gradient in light)

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6
Q

What happens to the ATP synthase in an artificial liposome containing a bacteriorhodopsin?

A

Makes ATP when light switched on

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7
Q

Is there an electron transport chain in an bacteriorhodopsin containing artificial liposome?

A

NO

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8
Q

What is 2,4-Dinitrophenol (DNP)?

A

An uncoupler

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9
Q

How does DNP uncouple?

A

Shuttles H+ from intermembrane space to the matrix dissipating the proton gradient

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10
Q

WHat happens in the presence of DNP?

A

ETC functions, but no ATP is made (no H+ grad)

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11
Q

What does DNP prove?

A

The pmf is necessary for ATP synthesis

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12
Q

What does removing the outer mitochondrial membrane prove?

A

This proves than ATP is not synthesised in the ETC, and outer membrane is required for formation of pmf

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13
Q

What does bacteriorhodposin containing artificial liposomes prove?

A

The proton gradient is sufficient for ATP synthesis without the ETC

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14
Q

What happens if you take DNP?

A
  • Fuel molecules still undergo CAC, B-Oxidation, Pyruvate dehydrogenase
  • Coenzymes are reduced
  • ETC functions
  • No ATP is made
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15
Q

What happens to the energy stored in the pmf in presence of DNP?

A

Released in the form of heat rather than ATP

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16
Q

What does the ETC do?

A

Produces a proton gradient

17
Q

What uses the proton gradient to generate ATP?

A

ATP synthase

18
Q

What are the two parts of the ATP synthase?

A

F1 & Fo

19
Q

Where is the F1 of the ATP synthase?

A

In the matrix

20
Q

Where is Fo of the ATP synthase?

A

In the inner mitochondrial membrane

21
Q

How does the F1Fo-ATP synthase work?

A

As a molecular motor, with proton flow driving rotor movement

22
Q

What is an immobilised ATP synthase linked to?

A

FLuorescent actin

23
Q

What does rotor movement do in the ATP synthase?

A

Causes conformational changes in the stator that drives ATP synthesis

24
Q

Which subunits in the F1FO-ATP synthase turn?

A

‘rotor subunits’

25
Q

Which subunits in the F1FO-ATP synthase do not turn?

A

‘stator subunits’

26
Q

Where in F1 does Movement of the rotor causes conformational changes?

A

The catalytic α and β subunits of F1

27
Q

What are the possible conformations in the catalytic α and β subunits of F1?

A

O = Open
L = Loose
T = Tight

28
Q

What happens in the O (open) conformation?

A

ATP release/ADP and Pi binding

29
Q

What happens in the L (loose) conformation?

A

Holds ADP and Pi in preparation for catalysis

30
Q

What happens during the T (tight) conformation?

A

Catalysis - Formation of ATP

31
Q

What is the order in which the rotor turns?

A

O -> L - > T - > O -> L etc.

32
Q

How many protons are required to produce 1 ATP?

A

4 protons

33
Q

How many protons get pumped into the IMS for 1 NADH?

A

10 protons

34
Q

How many protons get pumped into the IMS for 1 FADH2?

A

6 protons