lecture 23 Flashcards

gene complexity and structure

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1
Q

what is the C value paradox?

A

excess DNA is present in the genome that does not seem to be essential for the development or evolutionary divergence of an organism

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2
Q

what paradox does the onion test refer to?

A

C-value paradox

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3
Q

what is C-value?

A

genome size

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4
Q

what is the g-value paradox?

A

the number of genes doesn’t have a correlation with organismal complexity

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5
Q

how are humans more complex than other organisms that have more DNA?

A

through alternative splicing and transcription factors

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6
Q

where does highly repetitive DNA occur?

A

heterochromatic regions(i.e., telomeres, centromeres)

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7
Q

what type of DNA is found in euchromatin?

A

moderately repetitive DNA and unique DNA

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8
Q

what are the purposes of moderately repetitive DNA?

A

length mutability, modulation of transcription factor binding, spacing between promoter elements, cytosine methylation, alternative splicing, mRNA stability, transcription start and termination sites, etc.

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9
Q

what is single copy DNA?

A

unique DNA; coding DNA; low copy number

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10
Q

what are exons?

A

“coding sequences,” determines phenotype

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11
Q

what are introns?

A

“intervening sequences” = areas of genes that generally don’t code for phenotype

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12
Q

is the 5’ region of mRNA that is directly upstream from the initiation codon translated?

A

no, it is the 5’ UNtranslated region

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13
Q

is the 3’ section of mRNA that immediately follows the translation termination codon translated?

A

no, it is the 3’ UNtranslated region

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14
Q

what is the dna sequence onto which the transcription machinery bins and initiates transcription?

A

promotor

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15
Q

what is the highly conserved sequence in DNA serving as the binding site for transcription factor binding?

A

TATA box

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16
Q

what is the consensus sequences that occurs upstream by 60-100 bases to the initial transcription site?

A

CAAT box

17
Q

what is the region of DNA that can be bound with proteins (activators) to activate transcription of a gene or genes?

A

GC box

18
Q

what do the GC box and CAAT box make up?

A

promotor proximal elements

19
Q

what is the section of nucleic acid sequence that marks the end of a gene or operon in genomic DNA during transcription?

A

terminator

20
Q

what is a set of several similar genes, formed by duplication of a single original gene, and generally with similar biochemical functions?

A

multigene family

21
Q

where are the genes in multigene families located relative to each other?

A

in similar regions of the same chromosome

22
Q

are the genes of multigene families used/synthesized at the same time?

A

no

23
Q

what are dysfunctional relatives of genes that have lost their protein‐coding ability?

A

pseudogenes

24
Q

what are multiple copies of small genes clustered throughout the genome at specific sites in high copy number?

A

repeated genes

25
Q

what type of genes are the genes that code for tRNA and mRNA? why?

A

repeated genes because so many tRNAs and mRNAs are needed

26
Q

does the terminator sequences occur before or after the poly-A tail?

A

after