Lecture 18 - Chloroplasts, Apoptosis, Endomembranes Flashcards

1
Q

Photosynthesis can be divided into 2 categories. What are they?

A

light-dependent reactions and light-independent reaction

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2
Q

Light-Dependent Reactions occur in

A

thylakoid membrane

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3
Q

light harvesting complex holds what important pigment

A

Chlorophyll

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4
Q

in light dep rxns, where do e- enter into and where are H+ pumped into?

A

ETC, thylakoid lumen

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5
Q

ATP and NADPH made in light reaction are used to make what

A

CH2O (carbs) in light-independent
reactions

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6
Q

Nicotinamide adenine dinucleotide
phosphate 2 forms

A

Oxidized = NADP+
Reduced = NADPH

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7
Q

Dark reactions / Calvin cycle are a) Light-Independent Reactions or b) light-dependent reactions

A

a) Light-Independent Reactions

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8
Q

where do light indep rxns occur?

A

in stroma of
chloroplasts

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9
Q

Programmed cell death name

A

apoptosis

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9
Q

apoptosis, involves the death of cells in a….

A

coordinated sequence of events

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9
Q

apoptosis is Part of an organism’s…

A

growth or development

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10
Q

apoptosis example: Interdigital cell death leads to….

A

regression of soft tissue between embryonic digits in many vertebrates

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11
Q

Bone morphogenetic protein (bmp) is a secreted protein that binds to what to activate what

A

binds to Bmp receptors (BmpRs) to activate apoptosis

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12
Q

Apoptosis is characterized by: (5)

A
  • Shrinkage of cell
  • Fragmentation of DNA and nucleus
  • Blebbing (bulge or protrusion) of the plasma membrane
  • Loss of attachment to other cells
  • Engulfment by phagocytosis
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12
Q

Expression of non-active BmpRs in chicken embryonic hind limbs results in what

A

greatly reduced interdigital apoptosis and webbed feet

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13
Q

what is apoptosis Initiated by?

A

intracellular stimuli like
genetic damage, hypoxia, or virus infection

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14
Q

“Killer” proteins like Bax cause change in….

A

mitochondria membrane
potential and to the leak of
Cytochrome c.

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15
Q

what commits the cell to
apoptosis

A

Release of apoptotic mitochondrial proteins

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16
Q

Release of _________ __and nuclear fragmentation during apoptosis

A

Cytochrome C

17
Q

Caspases do 4 things, name them

A

Disrupts cell
adhesion

Destroys lamins
(nuclear filaments)

Breaks down cytoskeleton

Activates DNase
(genome breakdown)

18
Q

Various diseases are directly associated to ________. In some cases, the problem is due to _____ _____ ________.

An example of this is _______, where too little apoptosis occurs, resulting in malignant cells that will ____ _____.

In other cases, it is _____ _____ _______ that is the culprit, such as in the case of degenerative diseases like __________ ________

A

apoptosis, too little apoptosis

cancer, not die

too much apoptosis, Alzheimer’s disease

19
Q

cytosol main functions

A

Protein synthesis, many metabolic pathways

20
Q

Endoplasmic reticulum (ER) main functions

A

Synthesis of lipids, synthesis of proteins

21
Q

Golgi apparatus main functions

A

Protein modification, packaging of proteins and lipids

22
Lysosomes main function
Degradation of cellular material
23
Endosomes main function
Sorting, recycling
24
Early electron micrograph focusing on the cytoplasm revealed...
membrane bound organelles and vesicles as well as extensive network of membranous canals and stacks of “sacs” (cisternae)
25
The Green Fluorescent Protein from jellyfish (Aequorea victoria) can be fused with other...
cellular proteins, The fusion protein can then be expressed in cells
26
GFP is used to track
Cell Components
27
how can GFP fusion protein fluoresces be visualized?
under a microscope
28
Observation of the fusion protein provides information about the ________ _______ (e.g. where it is localized in a cell or organism)
endogenous protein
29
many variants emitting fluorescence in different ________ have been created through directed genetic modifications
wavelengths
30
Transport of material between compartments:
* Organelle ⇄ PM (and vice versa) * Organelle ⇄ Organelle
31
Small, spherical, membrane-enclosed organelles that bud off donor compartment fuse with
acceptor or recipient compartment
32
Targeted movement (directed) uses (2)
cytoskeleton and motor proteins
33
targeted movement (directed) sorts signals
recognized by receptors
34
in Vesicular Transport.... Movement of vesicle uses what
cytoskeleton and motor proteins. Can be anterograde or retrograde
35
in Vesicular Transport...., Tethering vesicle to target compartment — via proteins from...
the Rab family of protein and other more specialized
36
in Vesicular Transport...., Docking of vesicle to target compartment — uses proteins called
SNAREs. SNARE assembly provides energy for fusion
37
in vesicular transport, Fusion of what occurs
vesicle and target membrane
38
Orientation of a ___________ ________ with respect to the cytoplasm and the interior of membrane-bound _________ is maintained during its travel through the ___________ system
transmembrane protein, compartments, endomembrane
39
the end of the transmembrane protein sticks out into what
the cytosol
40
the end of the transmembrane protein faces into what
the ER lumen
41
Examples of exocytosis:
Organelle → Plasma membrane Secretion of neurotransmitter
42
CASPASES are ENZYMES (proteases) that activate what
proteins that are involved in dismantling the cell