Lecture 11 Flashcards

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1
Q

if bacteria is a haploid can it have a dominant or recessive allele?

A

no it cant bc it has a single allele for everything

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2
Q

prototroph

A

wild type that is self sufficient
-e.coli strain will grow with minimal media that has sugars as a carbon source and salt

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3
Q

auxotroph

A

mutant that cant grow on minimal media unless it is supplemented with a specific compound
-just like the arginine experiment

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4
Q

what does replica platting allow you to do?

A

phenotype the bacteria
-grow the cells on a rich media so you can find the colonies and strains that dont have the genes to grow on minimal media

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5
Q

conjugation

A

bacterial sex
-pilli transfers information
-a non donor cell can inherit the ability to be a donor
-b would be receptor and then b+ would be the donor once it inherits the F+

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6
Q

donor gene

A

-F
-fertility factor
-lives on donor plasmid
-small circular DNA but NOT the chromosome
-plasmid does not always have F factor
-causes plasmid to extend pillis where a single strand will pass through to the recipient to be replicated into a second strand

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7
Q

Hfr strain

A

-an F+ strain that is better at donating all the genes EXCEPT the F+ gene
-The F+ gene of Hfr is on the main chromosome NOT the plasmid

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8
Q

why dont Hfr transfer F+ gene?

A

-because it is transfering the entire chromosome and the F is the last to get transferred
-before the F can get through the pillis breaks bc it is fragile

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9
Q

exogenote

A

linear DNA from the F gene not getting all the way through so it cant complete the circle
-it will recombine into the recipient chromosome bc bacteria do not like linear DNA
-the rest of the exogenote after recombination gets lost

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10
Q

endonote

A

circular DNA in the recipient

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11
Q

What do Hfr have?

A

fragile pillis

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12
Q

What can we use Hfr for?

A

to map bacteria chromosomes
-ex: crossing a drug resistant strain to a non drug resistant strain and blending the bacteria at different times to see at what time each gene transferes
-this will give us a map in minutes of where genes are on the chromosome

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13
Q

does every bacteria strains have the same gene order on chromosome?

A

no
-because the chromosome is not linear (this is the genetic evidence for circular chromosome)

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14
Q

what changes the order in which genes enter the recipient cell?

A

the location of the F on the chromosome and the F can be in a different location each time

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15
Q

recombination frequency mapping

A

a more specific map of where things are but it only works for exogenote that is transferred with an even number of recombination

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16
Q

Can Hfr reverse? and what does it create?

A

yes, this causes F to pop out of the chromosome and go back to the plasmid
-the risk is that is accidentaly takes other gene with it not just F
-this is what creates diploid
-ex: F takes lac w it to the recipient from the main chromosome. The recipient already has lac in its main chromosome so now it is a diploid for the lac gene which can be dom or rec.

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17
Q

proof that every adult cell encodes the entire genome?

A

remove the nucleus of the frog cell and replace it with intestinal cell and the frog egg still births a frog

18
Q

What determines gene expression?

A

cis regulatory regions determines what gets turned off and on

19
Q

What happens when e.coli detects the presence of lactose?

A

makes beta galactosidase to metabolize the lactore
-the enzyme will hydrolyze the beta glycoside linkage turning lactose into galactose and glucose

20
Q

what happens to galactose?

A

it enters glycolysis

21
Q

What enzyme allows lactose to enter E.coli?

A

lac protease

22
Q

What happens if both glucose and lactose are present?

A

E.coli consumes glucose first then makes the enzymes to consume lactose

23
Q

positive gene regulation

A

making enzyme to digest lactose

24
Q

How can we measure beta gal activity?

A

use x gal (blue coloring) or yellow (quantitative bc the intensity of the color varies bc of the metabolization of ONPG)
-color means that the cell is producing enzyme

25
Q

purpose of inducer?

A

to trick the e.coli into making enzyme
-looks like lactose but cant be used by e.coli

26
Q

what encodes permease?

A

lac y

27
Q

encodes b gal?

A

lac Z

28
Q

ecoli structural genes?

A

lac a, z, y
-they are coregulated

29
Q

will a lac z mutation affect lac a or y

A

no

30
Q

lac I

A

-inducer
-mutation here makes the structural genes constitutive (always making enzyme)
-mutation increases enzyme activity
-away from the other structural genes
-ITTG

31
Q

lac O

A

next to the other structural genes
-mutation can cause constitutive or no enzyme activity
-genes that never turn on are close to the far side of O y lose que siempre estan prendido estan next to structural genes

32
Q

episome

A

donatable gene

33
Q

mereploidy

A

partial diploid

34
Q

What makes lac O cis?

A

turns on genes on the same chromosomes
-located on the same gene it regulates

35
Q

trans

A

typically protein or RNA molecules that can regulate genes on the same or different chromosomes

36
Q

What makes lac I trans?

A

it can regulate genes no matter where they are on the chromosome or plasmid

37
Q

I^s

A

silent allele
-no enzyme produced

38
Q

what type of allele is I

A

constitutive

39
Q

Can Lac I be split into 2 regions like lac O?

A

no because lac I genes are all over the place

40
Q

Which type of I is dom?

A

I^s is dom therefore it can block enzyme production from any location since it is spread out

41
Q

Lac O regions

A

-P (tells cell to being making protein)
-O (traffic light that can switch gene on or off) (can stop enzyme production to save energy)