Lecture 10 Flashcards

1
Q

What is the lower limit for catalytic perfection?

A

10^8 s^-1 M^-1

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2
Q

What is an enzyme inhibitor?

A

A compound that binds to an enzyme and reduces its activity

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3
Q

Why are enzyme inhibitors important?

A

Natural inhibitors regulate metabolism; many drugs, poisons and toxins are inhibitors; they can be used to study enzyme mechanisms and metabolic pathways

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4
Q

What are the two classes of inhibitor?

A

Irreversible and reversible inhibitors

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5
Q

What is an irreversible inhibitor?

A

An inhibitor that binds covalently to the enzyme in order to permanently inactivate it

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6
Q

What does an irreversible inhibitor react with?

A

Covalently with a specific amino acid side chain, usually in the active site

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7
Q

What is a reversible inhibitor?

A

Inhibitor that is non-covalently bound to the enzyme and can be subsequently released, leaving the enzyme in its original condition

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8
Q

What does a reversible inhibitor change?

A

The kinetic parameters of the enzyme

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9
Q

What are the two forms of reversible inhibitors?

A

Competitive and non-competitive

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10
Q

What is a competitive inhibitor?

A

A inhibitor that competes directly with the substrate, for the active site

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11
Q

What is the change in the kinetic parameters of a competitive reversible inhibitor?

A

An increased Km, more substrate needed in order to reach V = Vm/2

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12
Q

What is a biological example of a competitive reversible inhibitor?

A

Transition state analogues e.g. Lipitor competing with the inhibitor Anastrozole. This is a treatment for some forms of breast cancer

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13
Q

What is a non-competitive inhibitor?

A

An inhibitor that binds at a different site than the substrate, therefore the enzyme can bind to substrate, inhibitor or both

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14
Q

What does a non-competitive reversible inhibitor do to the enzyme?

A

Slows does the ability of the substrate to react

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15
Q

What is the change in the kinetic parameters of a non-competitive reversible inhibitor?

A

Vmax is decreased and therefore V is too.

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16
Q

What happens if a non-pure (mixed) inhibitor reacts?

A

Vmax and Km will both change

17
Q

What is feedback and feedforward regulation?

A

A sensible, post-translational strategy to avoid making unnecessary metabolic intermediates

18
Q

What is an example of feedforward activation?

A

AMP feeding forward and binding allosterically to glycogen phosphorylase in order to generate ATP production

19
Q

What is an example of feedback inhibition?

A

Glucose-6-P binding allosterically to glycogen phosphorylase to inhibit ATP production

20
Q

What are the methods of enzyme regulation?

A

Covalent modification, allosteric effects, proteolytic cleavage, turning gene expression on or off, degrading the enzyme