Lecture 1 Flashcards

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1
Q

What is Energy?

A

Energy is the capacity to do work.

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2
Q

Kinetic Energy

A

When you are using the energy to do something. The energy of motion.

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3
Q

Potential Energy

A

When you are storing the energy for another time. Going to store energy in any shape or form.

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4
Q

Oxidation

A

when you have a molecule and be losing some type of electron.

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5
Q

Reduction

A

Gaining some type of electron.

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6
Q

Reducing power

A

The ability of organisms to store energy and molecules by transferring electrons to them.

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7
Q

The first law of thermodynamics

A

Energy cannot be created nor destroyed it can only change from one form to another.

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8
Q

Heat

A

measure of the random motion of molecules

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9
Q

Entropy

A

A measure of a disorder of a system.

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10
Q

Free Energy

A

Amount of energy available to break and form other chemical bonds.; the energy available to do work

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11
Q

G = H - TS

A

G: Free Energy
H: Enthalpy - the energy contained in a molecules chemical bond (ex: food)
T: Absolute Temperature
S: Entropy

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12
Q

Endergonic

A

+g Any reaction that requires an input of energy.

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13
Q

Exergonic

A

Any reaction that requires the excess free energy as heat.

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14
Q

Activation Energy

A

The energy required to destabilize existing chemical bonds and initial a chemical reaction. The energy you need to start a reaction.

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15
Q

Which statement does not describe the structure of ATP?

A

You need ribose, adenine, and a triphosphate group

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16
Q

______ occurs when energy is transferred from one molecule to another and are used in many different biological processes. Fill in the blank.

A

Redox Reaction

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17
Q

What is often a byproduct of a chemical reaction (according to the First Law of Thermodynamics)?

A

Heat

18
Q

Which statement describes any information discussed in class regarding the Second Law of Thermodynamics?

A

The Second Law of Thermodynamics - just because energy is there, that doesn’t mean that everything you consume, you can get something from because some of it is going to be waste material; disorder is more likely than order (the chances of you eating something and using every single piece of it is basically impossible)

19
Q

What is the equation for Gibbs free energy?

A

G = H - TS

20
Q

How are catalysts useful for completing chemical reactions?

A

Catalysts lower the activation energy needed to begin a chemical process (reaction goes faster)

21
Q

How does ATP store and release energy (know the specific bond we discussed)?

A

ATP stores energy in the bonds between the phosphate groups which have a low activation energy to be broken; they can release a lot of energy when broken.

22
Q

What is the difference between the structures of ATP and ADP (there is only one main difference we discussed in class)?

A

ATP has 3 phosphates and ADP has 2 phosphates

23
Q

Know the ATP cycle below. You will have to label the steps of this reaction if this question is chosen by Excel.

A

You have ATP, you add water, and through a hydrolysis reaction, water breaks apart the ATP (take a phosphate off) into 2 pieces: ADP and the extra phosphate that was taken off, energy for endergonic cellular processes is now available, Pi stands for the extra phosphate that was broken off, then you add the phosphate back to the ADP

24
Q

Cells use proteins called ______ as catalysts to lower activation energy during chemical reactions. Fill in the blank.

A

Enzymes

25
Q

What is a substrate?

A

A molecule that will undergo the reaction

26
Q

active site of an enzyme

A

is a place where the substrate binds to an enzyme at that specific area.

27
Q

What is the definition of an enzyme-substrate complex?

A

Enzyme-substrate complex - when the substrate and the enzyme are connected and different chemical processes take place inside of that area

28
Q

What is the definition of a multienzyme?

A

when several enzymes catalyze different steps of a sequence of reactions and are associated with one another in non-covalently bonded assemblies

29
Q

Which is not an advantage of using multienzymes verses regular enzymes?

A

The rate of the process is much faster

The reacting substance doesn’t leave the complex while it goes through a series of reactions (unwanted side reactions are prevented)

All of the reactions that take place within the multienzyme complex can be controlled as a unit so the chances of something going wrong is minimal

30
Q

_________ are chemical components which assist in an enzyme’s function. ______ are when the cofactor is a non-protein organic molecules (i.e. vitamins). Fill in the blanks.

A

Cofactors and Coenzyme

31
Q

For specific enzymes, what happens when a cofactor is not attached to its designed enzyme?

A

The substrate would not be able to attach itself

32
Q

Which statement explains how temperature and pH can affect enzymes?

A

Temperature: If you increase the temperature, it will usually increase the rate of the reaction, by only up to the point called the optimum temperature (where you will have the highest rate of reaction, but if you go past this, the rate will go down

pH: there is an optimum pH (all of the enzymes will have this)

33
Q

What is the definition of an enzymatic inhibitor?

A

substances that bind to an enzyme and decrease its activity; can bind to something called the active site or the allosteric site

34
Q

What is the difference between a competitive inhibitor and noncompetitive inhibitor?

A

Competitive Inhibitor - interferes with active site of enzyme so substrate cannot bind; competes with the substrate for the same active site and displaces a percentage of substrate molecules from the enzyme

Noncompetitive - has to do with the allosteric site

35
Q

What is the definition of an allosteric site of an enzyme?

A

serves as a chemical on-and-off switch within the enzyme

36
Q

What is the definition of either an (a) allosteric inhibitor or (b) allosteric activator?

A

Allosteric Inhibitor - when you have an inhibitor attached to the allosteric site; it changes the shape of the enzyme so it can not bind to the substrate

Allosteric Activator - has to be attached to a allosteric site to keep enzymes in their active configuration; opposite of the inhibitor

37
Q

What is the definition of a biochemical pathway?

A

a reaction occurring involving enzymes; the product of one reaction becomes the substrate for the next reaction

38
Q

What is the definition of metabolism?

A

the total of all chemical reactions carried out by an organism

39
Q

What is the difference between the metabolic processes of catabolism and anabolism?

A

Catabolism - the reactions that harvest energy when chemical bonds are broken (when you eat food)
Anabolism - is the type of reaction that expends energy to make or transform chemical bonds

40
Q

Many different biochemical pathways regulate their metabolic processes by using feedback inhibition pathways. What is the definition of feedback inhibition?

A

Feedback Inhibition - a type of biochemical pathway in which the final product becomes the allosteric inhibitor for the first enzyme in the pathway