L17 Flashcards
What inhibits polymerization in the SDS-PAGE procedure
oxygen inhibits polymerization
Coomassie blue staining
not dependent on sensitivity, simple
Silver nitrate
used on low quantity and rare proteins. time consuming. higher sensitivity
Fluorescent dye staining
sensitive and requires specialized equipment
mid range
What are the movements of Cl, glycine, and protein in Gel portion
Cl- very small and charged. fastest
Glycine- small and weakly charged, slowest
Protein- quite large, highly charged. faster than glycine
What are the movements of Cl, glycine, and protein in running portion
Cl- fast
glycine- high negative charge, very fast
protein- same charge, thicker gel makes small proteins faster
What is relative mobility
how far protein band goes compared to something fast (dye)
What is the relationship between mobility and size in acrylamide concentrations
mobility increases EXPONENTIALLY as size decreases