human bio semester 1 exam Flashcards
define metabolism
All the chemical reactions/processes that take place in the cells/body • 2 main types: Anabolic: o Building/synthesising o Using smaller molecules to build/make larger molecules o E.g. protein synthesis
Catabolic: o Breaking down larger molecules into simpler molecules o E.g. digestion (releases energy)
• This is done using enzymes
what are enzymes (structure, role)
organic catalysts: speed up rate of reaction and lower activation energy
specific proteins
Have an activation site: specific site that will only combine with specific molecules (substrate)
Substrate: molecule on which enzyme acts upon
lock and key model:
- enzymes are specific & fit together perfectly, like a lock
and key
- enzyme is like a specific key shaped to fit the lock
(substrate) and only the correct enzyme can connect
with the substrate
what is cell respiration
Complex chemical reactions that take place in the cells cytoplasm and mitochondria (cristae)
Process of converting glucose to a usable form of energy (ATP) + heat
Explain what happens during the stage of glycolisis
doesn’t require oxygen or energy
occurs in cytoplasm
breaks down 1 glucose molecule into 2 pyruvate molecules
produces 2 ATP
Explain what happens during the stage of Anaerobic respiration
occurs when oxygen is not available e.g. during exercise
occurs in cytoplasm
breaks down 2 pyruvate molecules into 2 lactic acid molecules produced through fermentation
energy from glycolysis converts 2 ADP into 2 ATP
Explain what happens during the stage of Aerobic respiration
occurs in mitochondria
step 1:
pyruvate molecules enter mitochondria
pyruvate is converted into acetyl CoA (1 carbon dioxide is removed & remaining 2-carbon structure joins to coenzyme A)
step 2:
acetyl CoA enters Krebs cycle
carbon atoms in acetyl CoA produces carbon dioxide and hydrogen ions
2 ATP produced
step 3:
uses oxygen
enters electron transport system: electrons are passed along electron transfer chain, hydrogen ions eventually collide with carbon dioxide and water is produced
produces 24 ATP
26 - 34 ATP produced **theoretical maximum
explain the 7 factors affecting enzyme activity
- concentration of enzyme: higher concentration of enzymes, faster rate of reaction because more enzymes present
- concentration of substrate: increasing substrate concentration increases rate of reaction because more substrates contact enzymes
- temperature: rate of reaction increases as temperature increases within optimum range (30 - 40˚) or enzyme denatures
- pH: each enzyme has an optimum pH where it’ll work most effectively
- products must be continually removed: or rate of reaction will slow because it’ll be more difficult for substrates to contact enzymes
- presents of cofactors of coenzymes: ions of non-proteins molecules that catalyse reactions.
cofactors: change shape of active site so enzyme can contact substrate
coenzyme: non-protein organic molecule e.g. vitamins - enzyme inhibitors: slow or stop reactions, controls the amount of products produced
explain what ‘nutrients’ is
Substances found in food required by cells for growth, repair & cell functioning
Food contains large complex molecule too big to enter and be used in cells
food must be digested to access nutrients
Organic nutrients/compounds: contain carbon e.g. carbohydrates, protein, lipids
Inorganic nutrients/compounds: vitamin, minerals, water
what are the functions of the digestive system
- Ingestion: physical process of taking food into the
body - Movement: muscle contractions move the molecules
along the alimentary canal - Mechanical digestion: break up of larger particles
into smaller particles - Chemical digestion: break down of molecules from
complex particles into its simplest form - Absorption: Simplest form of nutrients move from
the small intestine into the bloodstream - Elimination: formation of faeces to remove unwanted
materials from the body
describe the alimentary canal
- Tube that connects mouth to anus
- All structures that nutrients travel through
• E.g. mouth, pharynx, oesophagus, stomach, small
intestine, large intestine, anus
what are accessory organs
- Structures that are outside the alimentary canal
- Play a role in digesting the nutrients
- E.g. salivary glands, liver, pancreas, gall bladder
what are the 2 types of digestion
- Mechanical: physical process of breaking up larger
particles into smaller ones - Chemical: chemical process of breaking up complex
molecules/nutrients into its simplest form e.g.
enzymes
explain digestion in the mouth
pHl neutral to slightly acidic (6 - 7)
mechanical digestion:
mastication: action of the jaw and teeth breaking up food into smaller piece
teeth:
4 incisors: chisel shaped, biting & cutting
2 canines: tearing food
4 premolars: crushing & grinding food
6 molars: broad crowns for crushing & grinding food
tongue pushes bolus toward pharynx for swallowing
chemical digestion:
Salivary amylase is secreted by 3 pairs of salivary glands
Breaks down complex starch into polysaccharides
describe digestion in the stomach
pH: highly acidic (2 - 3)
mechanical digestion:
Waves of muscular contraction churns food to create a thick, soupy liquid called chyme
chemical digestion:
Pepsin is secreted from gastric glands
Hydrochloric acid breaks down bacteria and provides optimum pH for pepsinogen
When pepsinogen comes into contact with HCl it is converted into pepsin (active)
Pepsin breaks down complex proteins into polypeptides
describe digestion in the duodenum
pH: alkaline (7-8)
(no mechanical digestion)
chemical digestion:
**liver produces bile: bile salts neutralise stomach acid & emulsify fats
Pancreas produces pancreatic juice secreted pancreatic duct:
• Pancreatic amylase: breaks down polysaccharides
into disaccharide
• Trypsin: breaks down polypeptides into dipeptides
• Pancreatic lipase: breaks down fats into fatty acids
and glycerol
• Ribonuclease and deoxyribonuclease: breaks down
RNA and DNA
describe digestion in the ileum and jejunum
pH: slightly alkaline (7-8)
(no mechanical digestion)
chemical digestion:
- *most food absorption occurs here
- *liver produces bile: bile salts neutralise stomach acid & emulsify fats
- *6-7 m long
Intestinal glands produce:
• Intestinal amylase: breaks down disaccharides into
monosaccharides
• Intestinal peptidase: breaks down dipeptides into
amino acids
• Intestinal lipase: breaks down fat into fatty acids and
glycerol
describe digestion in the large intestine
• 1.5m long
• No digestion or enzymes: water is absorbed
• 18 – 24 hours
• Glands secrete mucous
• Bacteria breaks down any remaining organic
compounds
• Vitamins produced by bacteria are also
absorbed
explain the process of defecation
Removal of metabolic waste producesdby chemical
activity of the cells
Referred to as elimination
Faeces contain: - Water - Undigested food material - Bacteria - Bile pigments - Remains of cells broken away from alimentary canal lining
explain absorption in the small intestine
Occurs through Villi:
- small, finger-like projections from the wall of the small
intestine
- Microvilli cover each villus to increase surface area for
absorption - Villi are one cell thick and 1 mm long
- Villi are constantly moving to come into contact with the
nutrients - Inside each Villus is a lymph capillary (lacteal)
surrounded by a network of blood capillaries - Absorption occurs through simple diffusion & active
transport
explain different nutrients absorption into the bloodstream
Fatty acids, glycerol & fat soluble vitamins:
- Enter the lacteal via simple diffusion
- In the villi cells the fatty acids and glycerol combine to
form tiny fat droplets that then enter the lacteals
Amino Acids
- Absorbed into blood capillary network by simple
diffusion
Simple Sugars (e.g. glucose) - Absorbed into blood capillary network by active transport
Water and water soluble vitamins:
- Enter blood capillary network via simple diffusion
define excretion
Process of removing all metabolic waste products from the body
give examples of metabolic waste
Heat: remove through skin
Carbon dioxide: removed through lungs
Salts: skin
Lactic acids: kidneys
Bile pigments: alimentary canal
Urea: kidneys
Water: lungs and skin
explain the function of skin in the excretory system
Provide protective covering over surface of the body
Regulate body temperature
Plays important role in excretion
- Sweat gland are located in lower layers of skin
- A duct carries the sweat to a hair follicle or skin surface
where it opens at a pore
- Cell surrounding the glands are able to contract and
squeeze the sweat to the surface
- Glands secrete about 500mL water per day
- Dissolved in it are:
o Sodium chloride
o Urea
o Lactic acid
o Some drugs e.g. salicylic acid
explain the process of deamination
occurs in the liver (located in upper abdominal cavity)
Metabolic process that breaks down excess protein so it can be excreted
Part 1:
- Excess proteins are broken down in the liver into
amino acids
- The NH2 amino group is removed from the amino acid
- The NH2 group is converted into ammonia
Amino acid + oxygen ——enzymes—-> carbohydrate + ammonia
Part 2:
- The remains of the amino acid (carbon - hydrogen structure) is converted into a carbohydrate which is used to release energy, CO2 and water
- Ammonia is highly toxic to cells so it is quickly converted into the less toxic urea
- Urea is excreted in the form of urine, small amounts are lost in in sweat
Energy + carbon dioxide + ammonia —–> urea + water
Explain the kidneys in the excretory system
Primary excretion organs
Each kidney is about 11cm long
Surrounded by fibrous connective tissue called the capsule
Three layers:
Cortex: outer layer
Medulla: middle layer
Renal pelvis: inner layer
what are nephrons
• Nephron: functional unit of the kidney, its where
urine is formed
• Kidneys are composes of a large number of
nephrons
• About 2 million nephrons in each kidney
explain the structure of nephrons
Each nephron consist of a renal corpuscle and a renal tube, located in renal pyramids
Renal corpuscle:
- Consists of the glomerulus and glomerular capsule: expanded side of the nephron
Renal tube:
- Leads away from the glomerular capsule
- About 5 cm long
- Begins with a winding section called the proximal
convoluted tubule
- Beyond this each tubule has a straight portion before it
forms the loop of Henle
- Then the tubule becomes coiled again (second coiled
section is called the distal convoluted tube)
- Distal convoluted tube joins a collecting duct that opens up into the renal pelvis (which channels fluid from collecting ducts into the ureter)
Explain the function of nephrons
Responsible for removing waste from blood and regulating blood composition:
- Blood enters the kidney through the renal
arteries - Renal arteries divide into smaller arteries and
arterioles - Each renal corpuscle is supplied with an afferent
arteriole which forms a knot of capillaries called
the glomerulus - Capillaries unite to form the efferent arteriole
which passes out of the renal corpuscle - After leaving the renal corpuscle the efferent
arteriole breaks up into a second capillary
network (peritubular capillaries) - These surround the proximal and distal
convoluted tubules, the loop of Henle and the
connecting duct - Blood drains away from the peritubular
capillaries and leaves the kidney the renal vein
What are the differences between the afferent and efferent arterioles
- Afferent arteriole has a wider diameter than the
efferent arteriole - Afferent arteriole carries blood into the nephron,
efferent carries blood away
what are the 3 processes involved in urine formation
glomerular filtration
selective re-absorption
tubula secretion
what is the process of glomerular filtration
- Small substances move from the glomerulus into the
glomerular capsule - Afferent arteriole leading into glomerulus is much
wider than efferent arteriole leaving it - This increases resistance in blood flow and creates
high pressure in the capillaries - Capillaries force water and undissolved blood
components through it’s membrane into the
glomerular capsule - What’s left behind is residue
• Blood cells
• Proteins
what substances move into the glomerular capsule during glomerular filtration
water
urea
glucose
amino acids
vitamins
salt
how is filtration enhanced during glomerular filtration
- increasing pressure and resistance in the
glomerulus forces substances out - Cells of the glomerular capsule and capillaries are 1
cell thick - New blood is constantly brought the glomerulus and
keeps a concentration difference of the substances
what is selective re-absorption
Occurs in tubule of nephron and its surrounding peritubular capillaries
Many components of filtrate are useful, so the body uses selective re-absorption to take back what it needs
Must be large surface area achieved by:
- Long length of renal tubule, created by convolution
and lop of Henle
- Large number of nephrons in each kidney
explain the process of selective re-absorption
proximal convoluted tubule: glucose, amino acids, water, vitamins and salts are absorbed
loop of henle: ions are re-absorped to adjust pH to 7.3 - 7.4
distal convoluted tubule:
Further reabsorption of water and salt (depending on needs of body)
Water is moved by FACILITATED REABSORPTION (active)
**permeability of membrane in distal convoluted tubule and collecting duct can be changed so more of less water is absorbed
explain what happens during tubular secretion
Body removes unwanted waste and regulates pH levels
Substances are secreted back into the tubules:
hydrogen ions
ammonium
creatinine
toxins
drugs
neurotransmitters
explain what coeliac disease is
inability to tolerate a protein called gluten
the immune system responds to this by damaging or destroying villi in the small intestine
nutrients cannot be absorbed, and the person becomes malnourished
it is inherited
symptoms include: nausea and vomiting, stomach cramps, fatigue and weakness
treatment: no cure but follow a gluten free diet
whats the chemical equation for cell respiration
glucose + oxygen —-> carbon dioxide + water +energy
C6H12O6 + O2 —–> CO2 + H2O + ATP
what are the 2 chemical equations for deamination
amino acids + oxygen —-enzymes—-> carbohydrate + ammonia
energy + carbon dioxide + ammonia ——> water + urea
was is the structure and function of the cytoplasm
jelly like material
fills space between nucleus and membrane
75 - 90% water
cell organelles suspended in it
regulate osmotic pressure
was is the structure and function of the nucleus
largest organelle
oval of sphere shaped
nuclear membrane: double membrane, separates nucleus from cytoplasm
nuclear pore: gaps in the nuclear membrane, lets large molecules enter and leave the nucleus
nucleolus: inside nucleus, contains genetic material in DNA, plays a part in manufacturing proteins
was is the structure and function of the ribosomes
very small spherical organelles
site of protein synthesis
either attached to endoplasmic reticulum or free floating in cytoplasm
was is the structure and function of the endoplasmic reticulum
pairs of parallel membranes extending from cell membrane to nucleus
channels are for storing or transporting molecules e.g. protein
provides surface for chemical reactions to take place
rough: ribosomes attached
smooth: no ribosomes
was is the structure and function of the Golgi body
flattened stacks
modifies and packages proteins
vesicles: small sacks of liquid containing proteins formed at the edges of the golgi body membrane