HPCT 2ND AND 3RD WEEK Flashcards
A clearing agent that is used when the tissue is to be cleared directly from water, as in a frozen section
Glycerin and Gum syrup
Most commonly used clearing agent
Xylene
Characteristics of a good clearing agent
Should be miscible with alcohol to promote rapid removal of the dehydrating agent from the tissue
Should be miscible and easily removed by melted paraffin wax and/or by mounting medium to facilitate impregnation and mounting of sections
Should not produce excessive shrinkage, hardening or damage of tissue
Should NOT dissolve aniline dyes
Should NOT evaporate quickly in a water bath
Makes tissue transparent
Most important step in embedding
Orientation
Most common, routinely used embedding media
Paraffin wax
Used in tough tissues (embedding media)
Celloidin
Used in tissues that we want to prevent dehydration histochemistry (embedding media)
Gelatin
Embedding media for electron microscopy
Plastic
Melting point of paraffin wax (Routine)
56C
Process of applying dyes on the sections to see and study the architectural pattern of the tissue and physical characteristics of the cell
Staining
Main reason why cells are stained
To enhance contrast and visualization of the cell or certain cellular components under the microscope
Process whereby TISSUE CONSTITUENTS ARE DEMONSTRATED in sections by direct interactions with a dye or staining solution, producing coloration of active tissue component
Histological staining
Process where by constituents of tissues are studied THROUGH CHEMICAL REACTIONS that will permit microscopic localization of specific tissue substance
Histochemical staining
Combination of immunologic and histochemical techniques to detect phenotypic markers under microscope
Immunohistochemical staining
Purified form of a coloring agent or crude dye that is generally applied in an aqueous solution
Histological stain
Parts of the cells or tissue that are ACIDIC take more of (nucleic acid)
BASIC dye
Parts of the cells or tissue that are BASIC take more of (Cytoplasm)
ACIDIC dye
Process of giving color to the sections using aqueous or alcoholic dye solution
Only ONE dye is used, which is washed away after 30-60 seconds, prior to drying and examination
Direct staining
E.G Methylene blue
Process whereby the action of the dye is intensified by ADDING other agent or mordant
Eg. Mordant, accentuator
Indirect staining
E.G Gram Stain
Serves as a link or bridge between tissue and the dye to make staining reaction possible
INTEGRAL part of the staining reaction (staining won’t be possible without this)
Mordant
Accelerates or hastens the speed of staining reaction by increasing staining power and selectivity
NOT ESSENTIAL to the chemical union of tissue and the dye
Accentuator
Process whereby tissue elements are stained in a definite sequence
Staining solution is applied for specific periods of time or until the desired intensity of coloring of the tissue elements is attained
Once the dye is taken up by the tissue, IT IS NOT WASHED NOR DECOLORIZED
Progressive staining
The tissue is first overstained to obliterate the cellular details, and excess stain is removed or decolorized from unwanted parts of the tissue
Most common example is H and E staining
Regressive staining
Selective removal of excess stain from the tissue during regressive staining in order that a specific substance may be stained distinctly from the surround tissues
Differentiation/Decolorization
Acts as differentiator for both basic and acidic dye by dissolving excess dye
Alcohol
May act as a differentiating agent
Mordant
Staining with a color that is DIFFERENT from that of the stain itself
Metachromatic staining
Tissues are stained in color shades that are SIMILAR to the color of the dye itself
Orthochromatic staining
Process where a specific tissue element is demonstrated, not by stains, but by colorless solutions of metallic salts which are reduced by the tissue, producing an opaque usually BLACK deposit on the surface of tissue or bacteria
Metallic Impregnation
Not absorbed by the tissue BUT HELD physically on the surface as precipitates
Metallic impregnating agent
Reduced by argentaffin cells, forming black deposits under microscope
Ammoniacal silver stain
Blueing agent examples:
Tap water, Saturated lithium carbonate, 0.5% Ammonia in distilled water, Ammonium hydroxide, Scott’s Solution
Selective staining of living cell constituents
Vital Staining
Done by injecting the dye into any part of the animal body
Example: Lithium, India Ink, Carmine
Intravital staining
Used to stain cells immediately after removal from the living body
Example:
Neutral red, Janus green, Trypan Blue, Thionine, Nile Blue, Toluidine blue
Supravital staining
What is the best vital dye?
Neutral red
Vital dye that can stain mitochondria
Janus Green B
Application with a different color for contrast and background
Counter staining
Red cytoplasmic stain
Eosin Y
Eosin B
Phloxine B
Yellow cytoplasmic stain
Picric acid
Orange G
Rose Bengal
Green Cytoplasmic stain
Light green
Lissamine green
Red Nuclear stain
Neutral Red
Safranin O
Carmine
Hematoxylin
Blue Nuclear stain
Methylene Blue
Toluidine Blue
Celestine Blue
Most widely used cytoplasmic stain
Eosin
One of the most valuable stains used for differentially staining connective tissues and cytoplasm
An Acid dye and the terms acidophilic, oxyphilic, and eosinophilic are often used
Routinely used in histopathology as a counterstain to hematoxylin
Eosin
A primary stain
Basic dye
Nuclear stain
Nuclei: Blue to blue-black
Hematoxylin
Secondary stain (Counter stain)
Acidic dye
Cytoplasmic stain
Cytoplasm: Pink
Eosin
A mixture of picric acid and acid fuchsin for the demonstration of CONNECTIVE TISSUES
Acid Fuchsin-Picric acid (Van Gieson’s stain)
Fiber that can be stained by Van Gieson’s stain
Collagen Fiber
Giving GREEN Fluorescence for DNA and RED Fluorescence for RNA
Acridine Orange
Permits discrimination between dead and living cells
Acridine Orange
Used for staining of hemoglobin
Benzidine
Used as a contrast stain for Gram’s technique, AFB, Papanicolau method, Diphtheria staining
Bismarck brown
From Cochineal bugs / coccus cacti
Chromatin stain for fresh materials in smear preparations
Combined with aluminum chloride (Best’s Carmine solution) for GLYCOGEN staining (bright red color)
Carmine
Best known as an indicator (pH Indicator)
May be utilized as a stain for axis cylinders in embryos
Congo red
Congo red karjian’s technique stains what?
Amyloid stain
OLDEN of all stain
Stains amyloid, cellulose, starch, carotenes, and glycogen
Iodine
Iodine that is used for gram’s wiegert method for staining microbes and fibrin
Gram’s Iodine
Used as a test for glycogen, amyloid, and corpora amylacea
Lugol’s iodine
Stains and demonstrate mitochondria
Janus Green B
Acts as a contrast stain for ascaris eggs and erythrocytes and as a bacteria spore stain
Malachite Green
Excellent stain for elastic fibers (Tanzer Unna Orcein method)
Recommended in dermatological studies, demonstrate the finest and most delicate fibers in SKIN
Orcein
Iron stain
May be used for microanatomical color contrast of specimen
Used as an intravital stain for the circulatory system
Prussian Blue
Nuclear stain for fixed tissues
Substitute for Thionine in fresh frozen tissue sections
Recommended for NISSL GRANULE staining and chromaphilic bodies
Toluidine Blue
Tissue fixative and a decalcifying agent
Acts as a contrast stain to acid fuchsin in demonstration of collagen using Van Gieson’s stain
Acts as a cytoplasmic stain in contrast to basic dyes
Counterstain to crystal violet
Picric acid
Invented by Paldwell Trefall in 1881, The simplest among the different types of microtomes. This consists of a heavy base and two arms. The lower arm resting on pivots and a supporting column, and attached to the micrometer screw, at the base of which is found the ratchet wheel with feed mechanism.
Rocking Microtome
Invented by MINOT in 1885-86 to cut paraffin embedded tissue and is CURRENTLY the most common type used for both routine and research laboratories
Knife is fixed in horizontal position
Sections are cut between 3 and 5 um
Rotary Microtome
Developed by adams in 1789.
Two models are available, one is Base-Sledge Microtome that consist of two movable pillars holding the adjustable knife clamps allowing to bet set an angle for cutting celloidin sections
Base-Sledge microtome is favored in laboratories where very hard tissue or large blocks are usually sectioned
The second type is the standard sliding microtome. It is different from the base sledge microtome because with this instrument, the block remains stationary while the knife is MOVED backward and forward.
Developed mainly for cutting celloidin embedded tissue blocks and is MORE DANGEROUS because of the MOVABLE KNIFE.
Sliding Microtome
Invented by Queckett in 1848. Stage for block holder is hollow and perforated around its perimeter, attached to a reinforced flexible lead pipe thru which carbon dioxide passes from a cylinder.
Used to cut undehydrated thin to semi-thin sections of fresh, frozen tissues, especially in instances when rapid diagnosis is required and demonstration of histological fat is needed
Freezing microtome
A refrigerated apparatus used for freezing the tissue into the block holder to the correct degree of hardness that allows for easier and faster sectioning
Kept at temperature between -5C to -30C (Average is -20C)
Capable of freezing fresh tissues within 2-3 minutes and cutting sections of 4um with ease
Cryostat
Equipped with a glass or gem grade diamond knife that is used to cut very thin sections typically 60 to 100 nanometer of tissue embedded in EPOXY resin
Sections are stained with an aqueous solution of an appropriate heavy metal salt and examined with a TRANSMISSION ELECTRON MICROSCOPE
Ultrathin microtome
Microtome knives:
One sided of the knife is flat while the other is concave.
LESS concave sides are recommended for cutting CELLOIDIN-EMBEDDED tissue blocks on a sliding microtome
MORE concave sides are used to cut PARAFFIN sections on base-sledge, rotary or rocking microtome
Plane-concave knife (usually 25 mm in length)
Microtome knives:
With bot sides concave, recommended for cutting PARAFFIN-EMBEDDED sections on a rotary microtome
Biconcave knife (usually 120 mm in length)
Microtome knives:
Both sides are straight, recommended for frozen sections or for cutting EXREMELY HARD and TOUGH specimens embedded in paraffin blocks, using a base sledge type or sliding microtome
Plane-Wedge knife (Usually 100mm in length)
Angle formed between the cutting edges
Bevel angle
Normally about 27-32 degree
For cutting serial sections of large blocks of paraffin embedded tissues
Rocking microtome
For cutting paraffin embedded sections
Rotary microtome
For cutting celloidin embedded sections
Sliding microtome
For cutting UNEMBEDDED sections
Freezing microtome
For cutting frozen section
Cryostat or cold microtome
For cutting sections for EM
Ultrathin Microscope
Substance which can be smeared on to the slides so that the sections stick well to the slides
Choice of slide and adhesive will be influenced by the staining methods to be subsequently applied
Not necessary for routine staining
Essential for methods that require exposure of sections to acid and alkalis
Adhesives
Knives for EM
Used for trimming and semi-thin sectioning of tissue block
Washed with detergent, rinsed in distilled water, and alcohol, and dried with lint-free paper
Glass knives
Knives for EM
Used to cut and type of RESIN BLOCK- brittle and expensive but very durable
Cutting edge must be kept clean to avoid damage during sectioning
Diamond knives
Removal of gross nicks to remove blemishes, grinding the cutting edge of the knife on a stone (Carborundum)
Honing (HEEL TO TOE)
Types of hone
For manual sharpening (Best results)
Belgium yellow
Types of hone
Gives more polishing effect
Arkansas
Types of hone
Much coarser; used only for BADLY NICKED KNIVES
Fine carborundum
The process whereby the BURR formed during honing is remove and cutting edge of the knife is polished
Stropping (TOE TO HEEL)
Has a sharp cutting edge that can cut 2-4 microns thick section with ease.
Makes honing and stropping obsolete
Disposable blade
The thermostatically controlled type is preferable.
Water from a hot water tap can be used although this can give rise to air bubbles
The temperature of the water should be between 5-10C BELOW the melting point of the paraffin wax
Water bath
Temperature setting at the melting point of the wax so that no obvious damage is done to the sections and drying is complete in 30 minutes.
Hot play may also be used instead of this equipment
For more delicate tissues such as brain, a lower temp is used to avoid splitting and cracking of the section due to excessive heat
37C for 24 hours or longer is recommended
Drying oven or hot plate
A tool that is needed for handling section during cutting, and for removing folds and creases on the sections during “floating out” in water bath
Forceps
Polysaccharides of glucose, normally stored in the liver, heart, and skeletal muscles, but it may be abnormally present in certain diseases
Glycogen
Made up of hexosamines or mucus that is secreted by the goblet cells of intestinal mucosa, respiratory lining cells and certain glands
Mucin
Both glycogen and mucin are stained by
Periodic Acid-Schiff (PAS)
A histochemical stain that will demonstrate carbohydrates and other substances in the tissues
Can help diagnose:
Glycogen storage disease
Tumors
Fungal Infection
Basement membrane disease (eg. Goodpasteur’s syndrome)
M6 Leukemia (Acute erythroleukemia/DiGuglielmo)
Periodic Acid Schiff
PAS and tissue chemical bond
Coulombic bonds
POS POSITIVE substance color:
PAS nuclei color:
Positive substance: Red or Magenta
Nuclei: Blue
PAS with diastase for glycogen
Pas nuclei color:
Glycogen: Red
Nuclei: Blue black
Best carmine color
Glycogen: Bright red granules
Nuclei: Blue or grayish blue
Mucin, fibrin: Weak red
Langhan’s iodine method for glycogen (Carleton’s method)
Glycogen: Mahogany brown
Tissue constituents: Yellow
Other carbohydrate stains
Fresh frozen azure - A metachromatic staining for glycosaminoglycans
Alcian blue technique
Metachromatic toluidine blue staining
Combined aldehyde fucshin-alcian blue
Mucicarmine stain
Hale’s dialyzed (Colloidal) Iron technique
Fluorescent acridine orange technique
Unilocular lipid-filled adipocytes that specialized in lipid STORAGE
White adipose tissue
Multilocular adipocytes that specialize in lipid BURNING
Brown adipose tissue
Appears as signet rings on H and E stain because large lipid droplet displaces the nucleus
Fat cells
Breakdown products within cells from oxidation of lipids and lipoprotein
WEAR AND TEAR PIGMENT found most commonly in heart, liver, CNS, and adrenal cortex
PAS positive and variably acid fast
Lipofuscin or lipochrome pigments
Not a real dye
Gives color to lipids simply because they are more soluble in lipid medium of the tissues, than their medium of 70% alcohol
E.G Sudan Black B, Sudan III, and Sudan IV
Oil soluble dyes (Lysochromes)
Stain that colors fat droplets BLACK
MOST SENSITIVE OF THE OIL SOLUBLE DYES
Sudan Black
Recommended for staining triglycerides (Neutral lipids) giving them a deep RED stain
Sudan IV (Scharlach R)
First sudan dye to be introduced
Good fat stain for CNS
Gives less deep and LIGHTER ORANGE STAIN
Sudan III
Oil red O method in dextrin
Fat - Brilliant red
Nuclei - Blue
Osmic acid stains for fats
Nuclei - Yellow-orange
Fats - Black
Other lipid stain
Nile blue sulfate for fats
Toluidine blue - acetone method for sulfatide
Borohydride-Periodic Schiff (BHPS) method for glycosides
Sections must be left in the oven for a minimum of ___
30 minutes
Molecules of basic dyes has what charge
Positive charge
Cell wall and cytoplasm of bacterial cells has what charge
Negative charge
A process whereby the action of the dye is intensified by adding another agent or a MORDANT which serves as a link or bridge between the tissue and the dye
Indirect staining
A process whereby tissue elements are stained in a definite sequence, and the staining solution is applied for specific periods of time or until the desired intensity of coloring of the different tissue elements are attained
Progressive staining
The tissue is overstained to obliterate the cellular details, and the excess stain is removed or decolorized from unwanted parts of the tissue
Common example is H&E staining
Regressive staining
Selective removal of excess stain from the tissue during regressive staining in order that a specific substance may be stained distinctly from the surrounding tissues
Differentiation (Decolorization)
Mordant that can oxidize hematoxylin to a soluble, colorless compound
Iron alum
A process where specific tissue elements are demonstrated, not by stains, but by colorless solutions of METALLIC SALTS which are thereby reduced by the tissue, producing an opaque, usually BLACK deposit on the surface of the tissue or bacteria
Metallic Impregnation
Corner stone of tissue-based diagnosis
H&E
Stains nuclei and other parts blue in H and E
Hematoxylin (hematocleus)
Stain other structures and cytoplasm pink or red in H and E
Eosin (eosytoplasm)
Hematoxylin binds strongly to ___ and consequently binds to nuclear ___ and stains nuclei BLUE
Binds strongly to acids, and consequently binds to nuclear DNA
Most fixatives can be used in H and E staining except ___ that inhibits hematoxylin
Osmic acid solutions
H&E procedure
- Clear paraffin embedded sections in first xylene bath for 3 mins
- Transfer to second xylene bath for 2 to 3 minutes
- Immerse in first bath of absolute ethyl alcohol for 2 mins
- Transfer to a bath of 95% ethyl alcohol for 1 or 2 minutes
- Rinse in running water for 1 minute
- Stain with Harris alum hematoxylin for 5 mins (Ehrlich’s hematoxylin requires 15-30 mins)
7.Wash in running tap water to remove excess stain - Differentiate in 1% acid-alcohol (1mL concentrated HCL to 99ml of 80% ethyl alcohol) for 10-30 seconds
- Rinse in tap water
- Blue in ammonia water (5 mins ave) or 1% aqueous lithium carbonate until the sections appear blue
- Wash in running water for 5 mins
- Counterstain with 5% aqueous eosin for 5 mins. If alcohol eosin is used, the time can be reduced to 30seconds or 1 min
- If aqueous eosin is used, wash and differentiate in tap water under microscope control until the nuclei appear sharp blue to blue black and the rest of the tissue appear in shades of pink. If alcoholic solution is used, differentiate with 70% alcohol
- Dehydrate, clear, and mount
Staining in frozen section
Hematoxylin-Eosin method
Thionine method
Polychrome Methylene blue method
Alcoholic pinacyanol method ( Used for supravital staining of mitochondria and primarily for color sensitization in photography)
H&E staining of frozen section is regressive or progressive staining?
Progressive staining
Failure of staining may be due to?
Paraffin, Fixative, or decalcifying solution that has not been thoroughly washed out and removed.
A process whereby various constituents of tissues are studied thru chemical reactions that will permit microscopic localization of a specific tissue substance.
Histochemical staining (Histochemistry)
A combination of immunologic and histochemical techniques using a wide range of polyclonal or monoclonal, fluorescent labeled or enzyme-labeled antibodies to detect and demonstrate tissue antigens and phenotypic markers under the microscope
Immunohistochemical staining (IHC)
The last step in tissue processing that results in a permanent histological preparation suitable for microscopy
Mounting
Sections are fixed by leaving the slides in?
37C incubator overnight or by placing the slides in a wax oven at 56C-60C for 2 hours, or by drying the slides on a hot plate at 45C to 55C for 30 - 45 mins
CNS or brain tissue drying time and temperature
37C for 24 hours or longer
Alternative to drying
Use of adhesives
A substance which can be smeared on the slides so that the sections stick well to the slides.
Adhesives