GI Flashcards
The digestive tube is derived from what embryonic structure?
the yolk sac (later endoderm)
the lining of the GI tract and visceral organs is derived from which primary germ layer?
endoderm; GI epithelium, glands; many organs bud off: liver, pancreas and trachea
The stroma (CT) and muscles of the GI tract are derived from which primary germ layer?
mesoderm; stroma, muscles, peritoneum and spleen
The IMA is derived from which embryonic structure?
hindgut; transverse colon to rectum
The transverse colon to the rectum is supplied by which artery and is derived from what embryonic structure?
the IMA and the hindgut
The SMA is derived from which embryonic structure?
midgut; ampulla of vater to the transverse colon
the ampulla of vater to the transverse colon is supplied by which artery and is derived from what embryonic structure?
the SMA and the midgut
The celiac trunk is derived from which embryonic structure?
the foregut; mouth (oral cavity) to the ampulla of vater
The mouth (oral cavity) to the ampulla of vater is supplied by which artery and is derived from what embryonic structure?
the foregut and the celiac trunk
Mesentery is derived from which germ layer?
mesoderm
Dorsal mesentery
greater omentum; gut moves away from posterior wall in development and covers most abdominal structures
Structures that the ventral mesentery cover?
the lesser omentum and falciform ligament; bottom of the esophagus, stomach and upper duodenum; liver grows into it; derived from the septum transversum
ventral mesentery are what structures in an adult?
lesser omentum and falciform ligament; derived from the septum transversum
What structure divided the foregut structures (respiratory diverticulum which forms the lung buds and the esophagus)?
tracheoesophageal septum; abnormal septum development leads to esophageal atresia (closed esophagus) when the septum deviates posteriorly
Characteristic findings in a neonate with esophageal atresia
esophagus does not connect to stomach, fetus will not be about to swallow fluids leading to polyhydramnios; when born baby will present with drooling, choking and vomiting (unable to swallow secretions building up in oral cavity); diagnosis with NG tube unable to go into stomach because of closed cavity
Physiology herniation of the midgut
6th week of development, abdomen becomes too small so intestines herniate through umbilical cord; visible on fetal ultrasound; reduction of herniation by 12th week
Omphalocele vs Gastroschisis
both are pediatric abdominal wall defects
- omphalocele - abnormal rotation of the midgut; contents will be covered by peritoneum (membrane) and will be midline
- gastroschisis - full thickness abdominal wall defect; contents will NOT be covered by membrane, elevated maternal AFP because it leaks out, and will be paraumbilical (typically to the R) - note that insertion site is usually normal and separate from the defect
omphalocele
pediatric abdominal wall defects; abnormal rotation of the midgut; contents will be covered by peritoneum (membrane) and will be midline
associated congenital abnormalities to omphalocele
trisomy 21 (few associated abnormalities with gastroschisis)
gastroschisis
full thickness abdominal wall defect; contents will NOT be covered by membrane, elevated maternal AFP because it leaks out, and will be paraumbilical (typically to the R) - note that insertion site is usually normal and separate from the defect; pt will later have poor GI function after repair
the midgut rotates around what structure in development?
the SMA
Where should the cecum be located after midgut rotation has taken place?
cecum should be in right lower quadrant where it is normally located
malrotation of the midgut can lead to what defect?
volvulus - small bowel twist around SMA, there is vascular compromise leading to ischemia; presents with vomiting, sepsis, distended abdomen and blood in stool; tx w urgent surgery
L sided colon (cecum) can develop from which malformation?
malrotation of the midgut during development
persistence of the vitelline duct results in what abnormality?
Meckel’s diverticulum - outpouching or “bulging” that occurs at the ileum
Meckel’s diverticulum
outpouching or “bulging” that occurs at the ileum; formed due to the persistence of the vitelline duct (disappears by week 9); known as a TRUE diverticulum because contains ALL layers of the bowel (mucosa, submucosa and muscular); contain ectopic gastric tissue - can be diagnostic using a technetium scan
Rule of 2’s
Meckel’s diverticulum; occurs in 2% of the population, male to female ratio is 2:1, located within 2 feet from the ileocecal valve and usually 2 inches in size
duodenal atresia
most common type of GI atresia; results in failed “recanalization”; associated with Down syndrome; can see the Double Bubble Sign on imaging - dilation of duodenum and stomach with a tight pylorus in the middle
jejunal-ileal-colonic atresia
causes due to vascular disruption leading to ischemic necrosis that is reabsorbed and a blind end of the bowel is left; “apple peel atresia” - bowel distal to blind end may be curled
pyloric stenosis
hypertrophy of the pyloric leading to stenosis; projectile “non-bilious” vomiting; olive mass felt on palpation; usually in first born children
spleen embryology
arises from dorsal mesodermal tissue; NOT from endoderm!!; blood supply is the celiac trunk; gastrosplenic ligaments carries the short gastric arteries and the left gastric epiploic vessels
If there is a IVC or abdominal aorta rupture where would blood pool?
in the back of the abdomen - retroperitoneal bleeding; they are retroperitoneal strcutres along with the kidneys, 2nd/3rd parts of duodenum, ascending/descending colon, part of the rectum and head and body of the pancreas
Pectinate line
part of the anal canal
above the line - derived from the hindgut; columnar epithelium simulator to stomach; supplied by superior rectal artery (branch of IMA); venous drainage is superior rectal veins (IMV to portal system); can swell in portal HTN and lead to internal hemorrhoids; lymph drainage of internal iliac nodes
below the pectinate line - derived from proctoduem (ectoderm); stratified squamous epithelium similar to skin; supplied by inferior rectal artery (to internal pudenal to internal iliac to IVC); lymph drainage is superficial inguinal nodes; painful external hemorrhoids
above the pectinate line
derived from the hindgut; columnar epithelium simulator to stomach; supplied by superior rectal artery (branch of IMA); venous drainage is superior rectal veins (IMV to portal system); can swell in portal HTN and lead to internal hemorrhoids; lymph drainage of internal iliac nodes
portal HTN affects what part of the pectinate line?
above the pectinate line; venous drainage is superior rectal veins (IMV to portal system); can swell in portal HTN and lead to internal hemorrhoids
below the pectinate line
derived from proctoduem (ectoderm); stratified squamous epithelium similar to skin; supplied by inferior rectal artery (to internal pudenal to internal iliac to IVC); lymph drainage is superficial inguinal nodes; painful external hemorrhoids
lymph drainage above the pectinate line
nternal iliac nodes
Imperforate anus
handout and ectoderm meet to form anus but there is an absence of an anal opening; commonly associated with GU malformations (renal agencies and bladder exstrophy); baby will fail to pass meconium; can be a urethra or vagina fistula present
3 main branches of the celiac trunk
common hepatic, left gastric and splenic
the right gastric arteries originates from which artery?
the proper hepatic artery, which comes from the common hepatic artery which is one of the 3 branches off of the celiac trunk
The 2 most common perforated ulcers and their bleeding source
gastric ulcers at the lesser curvature of the stomach - bleeding from left gastric artery (celiac trunk)
posterior duodenal ulcers - bleeding from gastroduodenal artery ( branch off common hepatic artery - celiac trunk)
Short gastric arteries
branches of the splenic artery (celiac trunk); supply funds and upper cardiac portions of the stomach; vulnerable to ischemia if splenic artery is occluded; no dual blood supply
Pringle’s maneuver
clamping of the hepatoduodenal ligament in the OR to find the source of bleeding in a pt with internal hemorrhaging; used to control liver bleeding (via portal vein or proper hepatic artery), if bleeding continue then most likely IVC or hepatic veins
the 3 structures contained within the hepatoduodenal ligament?
part of the lesser omentum; contains the common bile duct, the portal vein and proper hepatic artery
SMA syndrome
rare cause of bowel obstruction; SMA can press downward and obstruct the duodenum leading to obstruction; classic pt - recent massive weight loss (fat pad shrinks)
dual blood supplies (abdominal collaterals) of the celiac trunk and the SMA
protects against ischemia if one is occluded; via superior and inferior pancreaticoduodenal arteries - supplies the duodenum and pancreas
dual blood supplies (abdominal collaterals) of the SMA and the IMA
protects against ischemia if one is occluded; via marginal artery of Drummond
dual blood supplies (abdominal collaterals) of the IMA and the iliac artery
protects against ischemia if one is occluded; via superior rectal and middle rectal arteries; rectal ischemia occlusion is RARE
pt with belly pain from ischemic colitis, where should you look next?
check the heart for A Fib - mostly caused by emboli from cardiac origin - typically affect jejunum the most due to traveling to the SMA; don’t look for somewhere in the abdomen; pt will have “pain out of proportion to exam” and occult blood in stool
Watershed areas of the colon
- splenic flexure - marginal artery of Drummond - vulnerable to under perfusion
- Rectosigmoid junction - narrow branches of IMA
Chronic mesenteric ischemia
intestinal angina; usually older pt with vascular dz; they have recurrent abdominal pain after eating so develops a fear of eating that results in weight loss; they will have sudden worsening on top of history of recurrent pain and may suggest acute thrombosis
Submucosa of the GI
CT that contains the meissner’s plexus - clinical correlation to Hirschsprung’s disease (missing this layer - aganglionic)
Auerbach’s plexus is found in which layer of the GI tract?
controls GI motility; in the muscular layer between the inner and outer muscular layers; controls peristalsis; abnormality can lead to achalasia (esophagus) and also absent in kids with Hirschsprung’s dz
epithelium of esophagus
non-keratinized stratified squamous epithelium; esophagus is the collapse structure filled with air behind the trachea on the CAT scan
epithelium of stomach
simple columnar epithelium; you will see gastric pits and gastric glands
histology of the small intestine; simple columnar epithelium; villi - MUCOSA extensions (finger-like) into the lumen - increase SA for absorption; crypts of Lieberkuhn - contain goblet cells; microvilli - microscopic extensions- epithelial cell membrane
the villi of the small intestines are extensions of what layer?
extensions of the mucosa layer into the lumen; increases surface area for absorption
Plicae circulares
folds of mucosa and submucosa found throughout the small intestines (most abundant in jejunum); increases surface are for absorption
Brunner’s Glands
only found in duodenum in the submucosa; produces alkaline fluid to protect from acidic stomach fluid; will be increased thickness in PUD
Peyer’s patches
lymph cell aggregates found in ileum; contain M cells collect antigens and presents the to initiate an immune response
Slow waves of the GI tract
maximum # of contractions per time
Stomach 3/min
Duodenum 12/min
ileum 8/min
Sphincter of Oddi dysfunction
narrowing that can occur after pancreatic or gallstone disease, contents (pancreatic enzymes and bile) are unable to be released via the Ampulla of Vater; presents with episodic RUQ pain and can see recurrent pancreatitis due to buildup of pancreatic enzymes
Sphincter of Oddi dysfunction
narrowing that can occur after pancreatic or gallstone disease, contents (pancreatic enzymes and bile) are unable to be released via the Ampulla of Vater; presents with episodic RUQ pain and can see recurrent pancreatitis due to buildup of pancreatic enzymes
Sphincter of Oddi Spasm
smooth muscle contractions caused by opioids (morphine); drug of choice in patients with pancreatitis is Meperidine (Demerol) because believed to not cause muscle spasms
the portal triad consists of what 3 vessels?
portal vein, hepatic artery and bile duct
Which hepatic zone is affected by viral hepatitis first?
zone 1 - right next to the portal blood coming from the intestines
Which hepatic zone is affected by ischemia first?
zone 3 furthest away from the hepatic artery
Pancreas embryology
two buds from foregut - ventral and dorsal - retroperitoneal organ (secondarily)
ventral - main pancreatic duct, part of head and uncinate process
dorsal - body, tail, accessory duct and the rest of the head
Annular pancreas
ventral bud fuse around the duodenum (ring of pancreatic tissue) and causes bowel obstruction; presents distention and abdominal pain
pancreas Divisum
dorsal and ventral ducts to not fuse leading to 2 senate ducts; often asymptomatic but can cause pancreatitis
Ampulla of Vater
where biliary and pancreatic ducts merge; empties into major duodenal papilla; anatomical transition from foregut to midgut; celiac trunk transitions to SMA
the 3 main salivary glands
submandibular glands
sublingual gland
parotid gland
submandibular glands
AKA Wharton’s duct; located at floor of the mouth;
sublingual gland
located at floor of the mouth
parotid gland
located behind angle of the jaw below and in front of ears;
saliva contains a large amount of which antibodies
IgA antibodies; also lysozymes - disrupt bacterial cell walls and lactoferrin - prevent bacterial growth
saliva contains a large amount of which antibodies
IgA antibodies; also lysozymes - disrupt bacterial cell walls and lactoferrin - prevent bacterial growth also found in breastmilk)
Sjogren’s disease
autoimmune dz resulting in loss of saliva leading to infections and dental carries (cavities)
Saliva electrolytes
becomes hypotonic as it travels passed the ductal cells (secreted as isotonic by acinar cells) due to the removal of Na and Cl and addition of K+ and HCO3
regulation of saliva
increased by both sympathetic (smaller effect) and parasympathetic (major effect) - M1 and M3 receptors; also activated by food smell and sight
muscarinic antagonist on saliva
causes dry mouth; atropine, scopolamine - motion sickness
muscarinic agonists on saliva
increase saliva production; pilocarpine (use in Sjögren’s syndrome - causes excessive sweating) and organophosphate poisoning - nerve gas or famers exposed to pesticides
Sialadentitis
inflame of salivary gland usually secondary to an obstructing stone (sialolithiasis) most often to Staph aureus or anaerobes; treatment is Nafcillin (stop coverage) or Metronidazole or Clindamycin (anaerobes)
Mumps
caused by RNA mumps virus; largely prevented by MMR vaccination; key feature is parotitis - often b/l leading to facial swelling
Pleomorphic adenoma
most common salivary tumor mainly affecting the parotid gland; benign mixed tumor (BUZZWORD: epithelial and storm tissue cells) with rare malignant transformation; painless mobile mass at the angle of the jaw
Warthin’s Tumor
2nd most common salivary tumor mainly affecting the parotid gland; AKA papillary cyst adenoma lymphomatosum; key risk factor is SMOKING 8x); key findings - presence of cyst filled fluid that are surrounded by dense lymphoid infiltrates and this lymph tissue can aggregate into germinal centers
Mucoepidermoid carcinoma
most common malignant salivary tumor; risk factor of prior radiation (child w lymphoma that was treated w radiation); occur in parotids; can cause facial nerve paralysis; look for squamous (epidermoid) cells AND mucus screwing cells
femoral triangle borders
superior - inguinal liagment
medial - adductor longus
lateral - sartorius
Femoral vessels
lateral to medial - “NAVeL”
nerve, artery (pulse), vein and then lymphatics
Contents of femoral sheath
below the inguinal ligaments; contains the femoral vein, artery and ring (opening to femoral canal) NOT the nerve
the 3 fascial layers of the spermatic cord
external spermatic fascia, cremasteric fascia and internal spermatic fascia
Inguinal contents in males vs females
males - spermatic cord
females - round ligament
Indirect inguinal hernia
“indirectly” through abdominal wall; LATERAL to epigastric vessels; covered by all layers of the spermatic fascia; due to congenital defect that causes bowel to protrude through the processes vaginalis (should have closed after the descent of the testes - to become tunica vaginalis testis); defect more common on the R
typically pt that presents with an indirect hernia
males are most common; adulthood pt who are heavy lifters (contraction workers) or straining (constipation) and newborns on mechanical ventilation
Key points on indirect inguinal hernias
Direct inguinal hernias
bowels bulges “directly” through the abdomen wall through Hesselbach’s triangle; MEDIAL to epigastric vessels; through the external ring; only covered by external spermatic fascia only and never bulges into the scrotum; usually older man of years of CT stress
Borders of Hesselbach’s triangle
inguinal liagment
inferior epigastric vessels
rectus abdominis
on the floor is the transversals fascia
Borders of Hesselbach’s triangle
inguinal liagment
inferior epigastric vessels
rectus abdominis
on the floor is the transversals fascia
Femoral hernias
herbal through the femoral ring medial to the femoral vessels; protrudes through the inguinal ligament; more common in women (but indirect is MOST common for both genders); high risk of incarceration - bowel trapped in hernia sac - can lead to strangulated (blood flow cut off and bowel becomes ischemic and necrotic)
Hiatal hernias
hernia where stomach herniates into the thorax leading to GERD; major risk factor is obesity; most common is the sliding hiatal hernia (95%); both due to phrenoesophageal membrane - laxity in sliding and defect (hole) in paraesophageal
sliding hiatal hernia
most common type of hiatal hernia; displacement of the GE junction above the diaphragm; funds remains below the GE junction; gives “hourglass” appearance on imaging
sliding hiatal hernia
most common type of hiatal hernia; displacement of the GE junction above the diaphragm; funds remains below the GE junction; gives “hourglass” appearance on imaging
CDH - Congenital diaphragmatic hernia
development defect in diaphragm - pleuroperitoneal membrane; basically a hole in the diaphragm; abdominal organs protrude into chest resulting in pulmonary hypoplasia; often fatal
GI barium contract showing and “hour-glass” appearance seen with a sliding hiatal hernia; protrusion of the stomach through the diaphragm into the thoracic cavity
Splenic vein thrombosis
splenic vein runs along the posterior surface of the pancreas and develop a clot from pancreatic inflammation (as in pancreatitis); short gastric vein drains fungus of stomach; splenic vein thrombosis can increase pressure in short gastric veins and cause gastric varies ONLY in the fundus; stomach and esophagus are spared
Meckel diverticulum; intestinal outpouching shows gastric mucosa due to failure of the vitelline duct to obliterate; various ectopic (heterotopic) tissues can be present - most common is gastric tissue - can secrete HCl and pt will present with lower GI bleeding and anemia
surgical landmark in removal of the appendix
pt with appendicitis - during the procedure, the tenure coli can be used as a surgical landmark - following it to its origin at the cecal base
External hemorrhoids
below the pectinate line; covered by squamous epithelium and have cutaneous innervation from the inferior recta nerve - branch off the pudendal nerve; sensitive to touch, temperature and pain
Internal hemorrhoids
above the pectinate line; covered by columnar epithelium; have autonomic innervation from inferior hypogastric plexus - only sensitive to stretch and NOT pain, temperature or touch
Which part of the GI is ALWAYS involved in Hirschsprung disease?
rectum is always involved - neural crest cells migrate caudally; newborn will fail to pass meconium within 48 hours of birth
Stool incontinence
internal and external sphincter or more commonly the puborectalis muscle fails to relax resulting in chronic constipation
Retroperitoneal organs
SAD PUCKER
Retroperitoneal hematomas
commonly associated with blunt abdominal trauma and typically reflect injury to retroperitoneal organs; pancreatic injury a frequent cause - high-riding seat belt; can lead to life-threatening blood loss
Pernicious anemia
autoimmune disorder involving cell-mediated destruction of parietal cells predominantly found in the upper glandular layer of the gastric body and fundus
Which two structures are added to cholic acid in conjugation to make it a better surfactant ?
taurine - an organic acid - this forms taurocholic acid
glycine - an amino acid - this forms glycocholic acid
what is the rate limiting enzyme in the synthesis of bile acid?
7 alpha hydroxylase (classic pathway - P450 enzyme - requires NADPH and O2); converts cholesterol to 7-alpha hydroxycholesterol which later turns into cholic acid - a major form of bile acid
Enterohepatic circulation of bile acids
most lipid absorption occurs in the jejunum (conjugated BA not absorbed); bile salts remain behind and are passed to distal small intestine and absorbed by active transporters in the terminal ileum (95%); the rest are secreted in the stool - a way cholesterol is excreted from the body
Main mechanism in which cholesterol is secreted from the body?
excreted in stool; cholesterol is NOT water soluble so can’t be passed in the urine; cholesterol drugs such as bile acid resins will encourage more excretion in stool by preventing bile reabsorption (largely replaced by statins)
Antimicoribal effects of bile salts
disrupts bacterial cell membranes
Cholestasis
disrupted bile flow to the intestines; lab findings - direct hyperbilirubinemia and elevated alkaline phosphatase; symptoms - jaundice, pruritus (itching due to bile salts in skin), dark urine, clay colored stools no stercobilin); can lead to fat malabsorption and decrease fat soluble vitamins