Exam 3 (11, 13, 14, 17) Flashcards
Functionally related genes are organized together in an…
(They also consist of promoter + operator sites and structural genes they control)
Operon
What is the function of helicase?
Unwinds strands of DNA during replication
What is the function of DNA gyrase?
Relaxes DNA supercoiling
Process of DNA to RNA (uses RNA polymerase)
Transcription
Type of mRNA formed during transcription in prokaryotes vs eukaryotes
Prokaryotes: polycistronic (no editing needed)
Eukaryotes: monocistronic (requires RNA editing)
What type of mutation is the substitution of one base?
Missense mutations (point)
Genes that are constantly expressed are called?
Constitutive
When tryptophan concentrations are high, is the Trp operon active?
Nope
When will the lac operon be on?
- Glucose absent
- Lactose present
What is the function of the repressor protein (LacI) in the lac operon?
Binds to operator, blocks transcription
Amount of mRNA translation start sites in prokaryotes vs eukaryotes
Prokaryotes: multiple + simultaneous transcription/translation
Eukaryotes: single site + no simultaneous synthesization (physical separation between mRNA and ribosomes, RNA editing needed)
What is the function of DNA ligase?
Joins ends of DNA fragments together
What are genes that are normally on but can be turned off called?
repressible
What is catabolite repression?
Process of turning off expression of all other operons if glucose is present
Trp operon (3)
- Usually on (repressible)
- Low trp = TrpI (repressor protein) is inactive, cannot bind to operator, transcription occurs!
- High trp = trp binds to TrpI (activates it) and TrpI binds to operator, polymerase is blocked, no transcription
What monitors lactose and what monitors glucose?
- Lactose: LacI
- Glucose: CAP
Lactose concentrations + lac operon activation
- Low lactose = operon inactive, LacI (repressor protein) is expressed/active, LacI binds to operator site, RNA polymerase blocked and no transcription
- High lactose = allolactose (inducer) binds to LacI for deactivation, transcription occurs if RNA polymerase can bind
cAMP + CAP
cAMP is made under nutritional stress
- Low glucose = high cAMP (cAMP binds to CAP - activation, CAP binds to promoter allowing transcription via RNA polymerase)
- High glucose = low cAMP, inactive cAMP and no binding, no transcription
what are the different types of horizontal gene transfer? (4)
- transformation: free floating DNA taken in by competent cells
- transduction: bacteriophages – generalized: random fragments packaged instead of virus (lytic); specialized: genes near phage DNA insertion site can be transduced (lysogenic)
- conjugation: transfer of plasmids via conjugative/sex pilus (hairlike), requires conjugative plasmid
- transposition: DNA movement (transposon - jumping gene; transposase: enzyme aiding transfer of transposon)
Disinfectant vs antiseptic
- Disinfectants inactivate microbes on inanimate surfaces or fomite
- Antiseptics disinfect living tissue
Examples of temperature control methods (3)
- Dry heat: incineration, hot air sterilization
- Moist heat (moisture penetrates): pasteurization (gentle heating); boiling; autoclave (pressure raises temp of stem above boiling point)
- Cold temperature: refrigeration/freezing (slows metabolism)
What is dessication?
Removal of water e.g. freeze drying
What is osmotic pressure?
High salt/sugar, reduces water like fruit cups or cured meats
What are the types of radiation control methods?
- Nonionizing: thymine dimers, doesn’t penetrate well, e.g. UV light
- Ionizing: DNA breaks, e.g. X-rays or gamma rays