DNA Synthesis Flashcards

1
Q

What type of replication does DNA undergo?

A

Semi conservative

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2
Q

What is a replication origin?

A

The specific site where DNA replication is initiated when

recognised by an initiation complex

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3
Q

What is a replication bubble?

A

Where the DNA unwinds to allow access to the replication machinery

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4
Q

How many replication origins are there in mammalian

DNA replication strands?

A

Multiple

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5
Q

How are the bubbles removed from the strands?

A

Eventually they coalesce and produce 2 daughter

chromosomes

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6
Q

When does DNA synthesis occur?

A

(Synthesis) Phase S

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7
Q

How long does the mammalian cell cycle last?

A

16-24 hrs

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8
Q

What are the phases of the mammalian cell cycle

A

M phase, G1, G2 and S phase

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9
Q

Why is the mammalian cell cycle longer than bacterial?

A

Mammalian DNA contains many more chromosomes

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10
Q

In bacterial DNA, how many replication origins are there?

A

one

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11
Q

Which enzyme synthesises new DNA strands?

A

DNA polymerase

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12
Q

Name the different types of Polymerases used in

bacterial DNA replication and their functions

A

DNA Polymerase I - repair
DNA Polymerase II - repair
DNA Polymerase II - repair

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13
Q

What are the different polymerases and their functions

in eucaryotes?

A
ɒ alpha - replication 
Β beta - replication 
ɣ gamma - mitochondrion
δ delta - causes elongation
𝜺 epsilon - elongation
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14
Q

List the essential features of DNA polymerase

A
  • Acts in a 5’ - 3’ direction
  • uses AT and GC base pairing
  • Requires a DNA template or primer
  • Has proof reading functions
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15
Q

What requirements need to met before replication can begin?

A

OH on 3C
4 dNTPs
Magnesium ions

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16
Q

What are dNTPs?

A

Deoxyribonucleoside triphosphates

  • Building blocks of DNA
    e. g. dATP, dGTP, dCTP, dTTP
17
Q

How is the sugar phosphate backbone formed?

A

Hydroxyl group attacks the 1st Phosphate
causes release of pyrophosphate
leaving 1 phosphate to react with the hydroxyl to form the
backbone

18
Q

Why is one DNA strand formed discontinuously?

A

DNA polymerases only work in 5’ - 3’ direction
- one strand will be made continuously
the other = discontinuous

19
Q

Where is a replication fork found?

A

At the replication origin

20
Q

What is the lagging strand?

A

3’ - 5’ strand - DNA pol. works in opposite direction so a

primer has to be laid down over again

21
Q

What does the reinitiating of replication multiple times form?

A

Okazaki fragments

22
Q

Define okazaki fragments

A

Short newly synthesised DNA strands formed on the lagging strand

23
Q

What is the role of DNA helicase?

A

Unwinds double helix

24
Q

What does topoisomerase do?

A

Removes coils in the DNA

25
Describe the role of Primase enzyme
Lays down some RNA so DNA polymerase knows where | replication starts
26
What is the role of binding proteins?
Stabilise the single stranded DNA, preventing reannealing
27
Explain the role of repair DNA polymerase
Repairs fragments and removes RNA
28
What does the enzyme DNA ligase do?
Splices fragments together
29
Why is the DNA replication error rate so low?
DNA polymerase has proof reading and mismatching | repair systems
30
What can happen if defects are inherited?
Can cause cancer
31
What is the significnce of DNA replication inhibitors?
They are important agents for - antiviral - antibacterial - antitumour
32
Give examples of DNA replication inhibitors
Antibacterial (Gyrase inhibitors) - ciprofloxacin, levofloxacin, novabiocin Antitumour (Topoisomerase II inhibitors) - etoposide, doxorubicin, mitoxantrone Antiviral (reverse transcriptase) - AZT