DNA Flashcards
Nucleotides are _____ with 1 to 3 ________ ______ added
phosphate groups
Nucleosides contain a ___ _____ _____ bonded to a _______ _____.
5 carbon sugar (ribose) bonded to a nitrogenous base
What are the 5 nucleotides?
Adenine Cytosine Guanine Thymine Uracil
DNA backbone is composed of alternating _______ and ______ groups
sugar & phosphate groups
DNA backbone is always read __ to __
5’ to 3’
Two DNA strands are ___________
antiparallel
What are the 2 purines?
A & G
What are the 3 pyramidines?
C, T, U
How many bonds between A & T/U?
2 H bonds
How many bonds between C & G?
3 H bonds
When DNA strand is pulled apart
denatured
When DNA strand is brought back together
reannealed
in eukaryotes, DNA is wound around ______ ______
histone proteins
DNA wound around histone proteins form _______ which may be stabilized by _______
nucleosomes
stabilized by H1
DNA and its associated histones make up ______ in the nucleus
chromatin
Heterochromatin is ____ transcriptionally ____ DNA
dense
transcriptionally silent
Euchromatin is ____ transcriptionally ____ DNA
less dense
transcriptionally active
Telomeres contain high ____ content to prevent _____ ___________
GC
DNA unraveling
Centromeres contain high ____ content
GC
hold sister chromatids together
DNA replication is __________
semiconservative
1 old parents strand + 1 new daughter strand incorporated into each of the 2 new DNA molecules
DNA polymerase does what function? What direction does it work?
synthesizes new DNA
reads template 3’ to 5’
synthesizes new strand 5’ to 3’
How is the lagging strand synthesized?
requires many primers, synthesized in discrete sections called Okazaki fragments
How many origins of replication are there in prokaryotes? eukaryotes?
Prokaryotes - one per chromosome
Eukaryotes - multiple per chromosome
How is DNA double helix unwound?
Helicase
How are unwound template strands stabilized?
ss DNA binding protein
How are RNA primers synthesized?
primase
How is DNA synthesized in prokaryotes? eukaryotes?
Prokaryotes - DNA polymerase III
Eukaryotes - DNA polymerases alpha, delta, epsilon
How are RNA primers removed in prokaryotes? eukaryotes?
Prokaryotes - DNA polymerase I
Eukaryotes - RNase H
both 5’ to 3’ exonucleases
How is RNA replaced with DNA in prokaryotes? eukaryotes?
Prokaryotes - DNA polymerase I
Eukaryotes - DNA polymerase delta
How are Okazaki fragments joined?
DNA ligase
What do DNA topoisomerases do? (and DNA gyrase in prokaryotes)
removes positive supercoils ahead of advancing replication forks
What synthesizes telomeres?
Telomerase
Do prokaryotes have telomeres?
No - circular DNA
Recombinant DNA is ….
DNA composed of nucleotides from 2 different sources
DNA cloning introduces a fragment of DNA into a ____ _____.
vector plasmid
A restriction endonuclease cuts the plasmid & fragment, leaving them with sticky ends that can bind