Chemistry Flashcards
What are the levels for the following
AFP uE hCG DIA Downs 18 NTD
AFP uE hCG DIA
Downs L. L. H. H
18. L. L. L. L
NTD. H. L. N N
Name 2 causes of pseudo M spikes in the b2 regions
Fibrinogen
C3 - APR
IgA runs in this area
Where are they found?
LD1 and 2
LD4 and 5
LD3
LD1 and 2 in heart, RBC, kidney
LD4 and 5 in liver and skeletal muscle
LD3 in lung, spleen, lymphocytes and pancreas
When is LD1> LD2
Acute MI, hemolysis, renal infxn
Where is alk phos found?
Bone liver intestines placenta
Fill in the following Borderline Hyperglycemia FPG 2hr OGTT A1c
Borderline Hyperglycemia
FPG 100-125 >=126
2hr OGTT 140-199 >=200
A1c 5.7-6.4 % >=6.5
Need two
CrCl =
Urine volume X Urine creatine / Plasma creatine
Expressed in ml/min or mL/min/1.73M^2
80-120 ml/min is the typical range
What is NH4? NH3?
NH4 : Ammonium
NH3 : Ammonia
What enzyme in the Urea cycle is x-linked and leads to increase level of Ammonia?
Ornithine transcarbamoylase
BUN=
UREA/ 2.14
Fractional excretion of Na =
Una x Pcr / Pna x Ucr x 100
If >1, consider acute tubular necrosis
Name 3 things that runs in the alpha 1 and 2 lanes
Alpha 1: Anti-trysin, anti-chymotrypsin, acid glycoprotein
Alpha 2: macroglobulin, haptoglobin, ceruloplasmin
What runs in the B1 and B2?
B1- transferrin
B2- IgA and C3
Where are these found?
CK1
CK2
CK3
CK1 : BB Brain
CK2/MB Skeletal 1% and Cardiac 30%
CK3 MM : Skeletal 99% and cardiac 70%
When is macro CK 1 and CK2 seen?
Macro CK1 (cytoplasmic) in elderly women and autoimmune disease Macro Ck2 (mitochondrial) , associated with malignancy
What is the reference interval for Tn?
99%
LD1 and 2 are found in?
LD4 and 5 are found in?
LD3 found in?
LD1/2 : Heart RBC Kidney
LD4/5 : Liver, skeletal
LD3 : lung, spleen, lymphocytes, pancreas
When is LD1>LD2? “Flipped”
Acute MI, hemolysis, renal infarction
How is delta bilirubin formed?
bilirubin bound to albumin
Name the sydrome
Poor uptake of unconjugated bili
Impaired conjugation
Impaired transmembrane secretion of conjugated bili
Poor uptake of unconjugated bili : Gilbert
Impaired conjugation : Crigler Najjar
Impaired transmembrane secretion of conjugated bili : Dubin johnson and Rotor
Anion gap =
Anion gap = Na- Cl- HCO3
Normal is <12
Osmolal gap =
Osmolal gap = Osm (measured) - (2NA + glucose/18 + BUN/2.8)
Normal is <10
Whats the ratio of Lecithin/sphingomyelin for fetal lung maturity?
> = to 2.5:1
Name the apolipoproteins
Chylo VLDL IDL LDL HDL
Chylo ApoCII ApoE ApoB48
VLDL ApoCII ApoE ApoB100
IDL ApoE ApoB100
LDL ApoB100
HDL ApoA1
Whats the major cholesterol carrier? TG carrier?
Cholesterol: LDL
TG: VLDL
Increase TG seen in?
I Chylo
IV VLDL
V Chylo and VLDL
Increase of LDL seen in?
IIa LDL aka Familial hypercholesterolemia AD
Incease in TG and LDL seen in?
IIb LDL and VLDL
III IDL aka dysbetalipoproteinemia
Gilbert and Crigler Najjar is associated with?
Unconjugated/Indirect bili
Dubin-Johnson and Rotor is associated with? How can you grossly tell them apart?
Conjugated/Direct bili
Dubin Johnson is Black
What do these drugs raise? ( Uncojugate or Direct)
Rifampin, probenacid, estrogen, cyclosporine
Elevated Unconjugated bili : Rifampin and probenaicd
Elevated Conjuagated bili: Estrogen, cyclosporine
In neonatal jaundice, total bili exceeds __ mg/dl with a daily increase of __ mg/dl and a conjugated bilirubin that exceeds __ mg/dl
In neonatal jaundice, total bili exceeds 12 mg/dl with a daily increase of 5mg/dl and a conjugated bilirubin that exceeds 2 mg/dl
Pancreas Amylase CEA Pseudocyst IPMN Serous cystadenoma Solid Pseudopapillary Mucinous
Amylase CEA
Pseudocyst H -
IPMN H H
Serous cystadenoma L L
Solid Pseudopapillary L L
Mucinous - H
Name 3 major alpha 1 globulin
anti-trypsin
anti-chymotrypsin
anti-acid glycoprotein
Name 3 major alpha 2 globulins
macroglobulin
ceruloplasmin
haptoglobin
Name the major B globulin
Transferrin
Name 3 Neg acute phase reactants
Albumin, prealbumin, transferrin
type 1 cryoglobulin is a
monoclonal Immunoglobulin
Type 2 cryoglobulin is a
Mix of monoclonal IgM and polyclonal IgG
Type 3 cryoglobulin is a
2 polyclonal immunoglobulin
Name causes of metabolic acidosis with
Anion gap
Non anion gap
Anion Gap (>=12) MUDPILES Cyanide Lactic Acid Uremia Methanol - O Paraaldehyde --O Salicylate Ethylene glycol --O Ketoacidosis
Non Anion gap
Renal tubular acidosis
Diarrhea
Elimination of most drugs follows ___ kinetics
1st order, except for ethano which is 0 order
Steady state reaches after?
5 doses
For alcohol what are the clinical effects for the % <0.05 0.05-0.1 0.1-0.2 0.2-0.3 0.3-0.4 >0.4
<0.05 Sobriety 0.05-0.1 Euphoria 0.1-0.2 Excitement 0.2-0.3 Confusion 0.3-0.4 Stupor >0.4 Coma and death
Signs of Anticholinergic effect? Agents?
Hyperthermia, dry skin, flushing, altered mental status, psychosis
Atropine, anti-histamine, TCA, scopolamine
Signs of Cholinergic effect? Agents?
Salivation, lacrimation, urination, diarrhea, GI cramps, ememsis, diaphoresis , miosis, wheezing
Organophosphates, pilocarpine
Signs of Adrenergic?
HTN, tachy, mydriasis, anxiety, hyperthermia
amphetamines, cocaine, PCP
Tangier’s disease?
AR characterized by low cholesterol, increased TG absent HDL, and absence of ApoA1. Cholesterol deposits on tonsils (orange) and others.
Abetaliproproteinemia
AR,
Fat metabolism disorder, Normal HDL, but low LDL, IDL, TG
Acanthocytes
In diabetes, what are some autoantibodies? What is DM1 assoc with?
Islet cell antibody
Insulin antibody
Antibodies to glutamic acid decarboxylase
insulinoma associated protein
Strong association with HLA DR and DQ
Graves associated with which antibodies?
Anti-microsomal 60%
Anti-thyroglobulin 30%
Hashimotos associated with which antibodies?
Anti tissue peroxidase
anti-thyroglobulin 90%
What happens in vitreous and body?
Glucose
Na
Cl
K
Vitreous: Glucose drops, K increases linearly, Na and Cl remain stable
Body: Glucose Increase, K double increase, Na and Cl drops
Urine dipstick is sensitive to what protein? Sugar? Ketone?
albumin
Glucose
acetoacetic acid
Name nitrite producing organisms and infections that doesn’t produce it
E.coli produce nitrite
Enterococci, gonorrhea, and TB does not
Normal urine pH? In Renal tubular acidosis?
pH6
In RTA, pH>6.5
The most common kidney stone is?
Calcium oxalate
Calcium oxalate stones are promoted by?
Low urine volumes
low urinary citrate
hypercalciuria
oxaluria
pH does NOT effect it
Who gets oxaluria?
Crohns patient with small bowel resection
increased ingestion of oxalate (spinach, nut, rhubarbs)
Calcium stones are formed where?
in the pelvis, attached to papillae
Whats the main component of the struvite stone?
Magnesium ammonium phosphate
aka triple phosphate
How is struvite stones made?
by UTI, proteus mirablilus and other urea spillite organism
Alkaline pH
Name two stones associated with alkaline pH, and acidic pH
Alkaline: Calcium phosphate and Struvite stones
Acidic: Urate stones
Name stone associated with inherited disease, AR, characterized by defective renal and intestinal dibasic amino acid transport affecting cystine, ornitine, lysine, and arginine (COLA)
Cystine stones
Low levels of anti-mullerian hormones suggest?
menopause, premature ovarian failuire
High levels of anti-mullerian hormones suggest?
PCOS
Name the associated disease anti-actin antibody : anti-Liver Kidney Microsome antibody : anti-mitochondiral (M2) antibody : anti-neutrophil cytoplasmic antibody : anti-soluble liver antigen antibody :
anti-actin antibody : AIH type 1
anti-Liver Kidney Microsome antibody : AIH type 2
anti-mitochondiral (M2) antibody : Primary biliary cirrhosis
anti-neutrophil cytoplasmic antibody : Primary sclerosing colangitis
anti-soluble liver antigen antibody : AIH type 1
Whats in the blue top tube?
Blue : Citrate
Whats in the Purple top tube?
Purple : EDTA irreversibly binds Ca+
Whats in the Green top tube?
Green : Heparin (Heparin interferes with PCR also if its Lithium heparin- interferes with lithium levels)
Whats in the Red top tube?
Glass: None
Plastic : silica clot activator
Whats in the Grey top tube?
Sodium fluoride (inhibits glycolysis)
What tube is best for coag studies?
Blue - citrate binds Ca+ REVERSIBLE
What tube is best for glucose/lactate studies?
grey top - sodium fluoride inhibits glycolysis
What tube is best for serum chem, serology , immunology, blood bank (crossmatch) studies?
Red
What tube is best for plasma chem studies?
Green
What tube is best for hematology and blood bank (crossmatch) studies?
Purple - EDTA like citrate binds Ca+, unlike citrate is NOT reversible
What tube is best for flow/fish?
Green top (sodium heparin)> Purple (EDTA)
What tube is best for HLA and DNA studies studies?
Yellow
Whats in a yellow top tube?
Citrate and dextrose (ACD): best for blood bank/genetic testing
Name that cast!
Glomerulonephritis
Red cell cast
Name that cast!
pyelonephritis
White cell cast
Name that cast!
Tubular necrosis
Tubular cast
Name that cast!
Severe renal disease
Waxy casts
Name that cast!
nephrotic syndrome
fatty casts
Name that cast!
nonspecific, renal disease, dehydration, exercise
granular and hyaline casts
Name that cast!
ESRD
Broad casts - these are hyaline, granular or waxy thats unusually broad
Name that crystal!
coffin lid
triple phosphate aka MAP
Name that cast!
envelope
calcium oxalate
Postmortem chem pattern:
Dehydration
High Na, Cl, BUN, Cr
Postmortem chem pattern:
Uremia
high Bun, Cr
Postmortem chem pattern:
Decomp
High K
AST highest in?
Heart
Decreased stool elastase and chymotrypsin is indicatie of?
Pancreatic exocrine insufficiency
A pseudo M spike at alpha2 and beta interface
Hemoglobin
In urine protein electrophoresis:
strong albumin, a1, and b
glomerular
In urine protein electrophoresis:
weak albumin, strong a1 and b
tubular
Name two causes of acidosis with hypokalemia
RTA 1 and 2
Cyanide inhibits? Treatment?
Cytochrome a3; sodium nitrite, amyl nitrite, and thiosulfate
Arsenic inhibits? Test?
oxidate phosphorylation, 24hr urine or nail/fingernail
Lead inhibits?
delta-ALA-dehydratase and ferrochelatase ( FEP, ZPP increased)
5’nucleotidase
mitochondria
N-acetyle-P-benzoquinone imine causes?
Zone 3 necrosis
formed when acetominophen is metabolized by p450
Feer and Ertheism is asociated with?
mercury- 24 hr ur
Feer- or Acrodynia: autonomic manifestation with desquamative rash of palms/sole
Erethism: Personality change
In the Third adult Treatment panel, whats the target LDL if 0-1 risk factors?
<160
In the Third adult Treatment panel, whats the target LDL if 2 or more risk factors?
<130
In the Third adult Treatment panel, whats the target LDL if CHD or equivalent?
<100
Whats a CHD equivalent?
DM, vascular disease, framingham risk of MI within 10 years >20%
Risk factors according to the TAT?
Smoking HTN >140/90 <40 HDL family history of CHD, Age (M>45, F>55)
CA27.29 or CA15-3 is seen in?
Breast CA, protein product of MUC1 gene
For carcinoides, what do they produce?
Foregut
Midgut
Hindgut
Foregut - histamine, catecholamines, 5HTP
Midgut - serotonin
Hindgut - nothing
NMP22 is a marker of what carcinoma?
Urothelial
BTA (Bladder tumor antigen) test detects?
Complement factor H (CFH) and related proteins
Light criteria is used for?
classify effusions
Pleural fluid: Serum protein ratio > 0.5
Pleural fluid: Serum LD ratio >0.6
Pleural fluid LD>2/3 of the upper limit of normal for serum LD
Rumack-Matthew nomogram is for?
Acetaminophen toxicity
In portal hypertension, the serum ascited albumin gradient is?
> 1.1 g/dl
In Ranson criteria, what are the values checked at admission/
Age >55 WBC >16 Glucose >200 AST>250 LD>350