Biochemistry Exam 3 Flashcards
Basic structure of an amino acid contains what 2 functional groups?
Amine and carboxylic acid
What are amines derived from?
Ammonia (NH3)
What is carboxylic acid derived from?
Carbon double bonded to oxygen and single bonded to a hydroxyl group
Short chains of amino acids (2~50) held together by peptide bonds
Peptides
Chain of 2 amino acids
Dipeptides
Longer chains of amino acids (>50)
Polypeptides
Large chains of polypeptides (200-300 typically) are known as
Proteins
Why are certain amino acids “essential”?
The body cannot synthesize them so we have to get them from our diet
What are the essential amino acids? (10)
PVT TIM HALL
Phenylalanine (Phe)
Valine (Val)
Threonine (Thr)
Tryptophan (Trp)
Isoleucine (Ile)
Methionine (Met)
Histidine (His)
Arginine (Arg)
Leucine (Leu)
Lysine (Lys)
What are the nonessential amino acids?
Alanine (Ala)
Asparagine (Asn)
Aspartic acid (Asp)
Cysteine (Cys)
Glutamic acid (Glu)
Glutamine (Gln)
Glycine (Gly)
Proline (Pro)
Serine (Ser)
Tyrosine (Tyr)
What are the 2 recently identified amino acids?
Selenocysteine (Sec)
Pyrrolysine (Pyl)
Inherited enzyme defects which inhibit metabolism of certain amino acids
Amino-acidopathies
Where are proteins primarily synthesized?
The liver
What proteins are not synthesized in the liver? Where are these synthesized?
Immunoglobulins/antibodies
They are synthesized in plasma cells
What are the 4 levels of protein structure?
Primary, Secondary, Tertiary, and Quarternary
If pH > pI, what is the protein’s net charge?
Negative
If pH < pI, what is the protein’s net charge?
Positive
What are simple proteins composed of?
Peptide chains of only amino acids
What simple protein shapes serve as transporters, enzymes, and messengers?
Globular simple proteins
What simple protein shape provides structure to cells?
Fibrous simple proteins
What makes up conjugated proteins?
A protein and a nonprotein (referred to as “prothetic group”)
Functions of proteins (8)
-Enzymes
-Hormones
-Transport
-Immunoglobulins
-Structural
-Storage
-Energy source
-Osmotic force
Proteins that increase in quantity during inflammation
Positive acute phase proteins
Proteins that decrease in quantity during inflammation
Negative acute phase proteins