Biochemistry Flashcards
What percentage of any living organism is made of water?
50-95%
The rest of the cell not including water is made of what?
- Nucleic Acid
- Proteins
- Lipids
- Carbohydrates
All living organisms are made of primarily 6 types of atoms
Carbon, Hydrogen, Oxygen, Nitrogen, Sulfur, Phosphorus
What is a covalent Bond
Sharing of Electrons
What is an Ionic Bond
Transfer of Electrons
What is a Polar Covalent Bond
Unequal sharing of Electrons
All organic compounds contain?
Carbon
What is catabolism
chemical reactions that break down compounds into simpler forms
What is anabolism
Chemical reactions that build up substances
What is an element
A pure substance that cannot be broken down using ordinary chemical or physical techniques
What are atoms
Smallest particles of elements that allow elements to differ from each other
What are most organic compounds made of?
Carbon, Hydrogen, Oxygen, as well as Nitrogen
What are 3 subatomic particles
Protons, Electrons, Neutrons
Do atoms have net charges
No, # of neutrons = # of protons
What is the mass number
Sum of protons and neutrons in an atom
What is an isotope
Different neutron containing form of an element
What are intermolecular forces
Bonds in between molecules, weaker relative to other forces: London Dispersion, Dipole-Dipole, Hydrogen bonds
What are intramolecular forces
Bonds in between atoms of a molecule: ionic, covalent, etc.
What are the three types of intermolecular forces
London Dispersion, Dipole-Dipole, hydrogen bonds
What are characteristics of London Dispersion forces
Weakest intermolecular force, increase in strength with bigger molecules, exists between all atoms and molecules, formed by the temporary unequal distribution of electrons as they orbit the nucleus
What are Dipole-Dipole forces
Stronger than london forces, hold polar molecules together, -ve is attracted to +ve of another molecule
What are hydrogen bonds
The strongest intermolecular forces, strongest type of Dipole-Dipole force between an H+ of one molecule and a N, O or F of another molecule
Properties of water
Water is a polar molecule, so hydrogen bonds form between water molecules, known as the universal solvent, dissolves the most substances, small non polar molecules are only slightly soluble in water, large non polar molecules do not dissolve at all
What are acids
Increase the concentration of hydronium ions in water solutions (H3O+)
What are bases
increase the concentration of hydroxide ions in water (OH-)
What is a neutralization reaction
The reaction where an acid and base produce water and a salt
Why was the pH scale created
Easier way to interpret the concentration of H3O+ ions
According to Bronsted-Lowry, what are acids and bases
Acids are proton donors and Bases are proton acceptors
What are buffers
Certain chemicals or combination of chemicals minimize changes in pH by consisting of conjugate acid-base pairs in equlibrium
what do reversible reactions mean for acids
Reversible reactions means the acids are usually weak
What is the smallest hydrocarbon
Methane
What are only ionic or strongly polar
Functional groups
What do carbohydrates supply
Short term energy to cells
What ratio do carbohydrates exist in
1:2:1 (carbon, hydrogen, oxygen)
What is a monosaccharide
simple sugar monomer that bonds with others to create carbohydrates (like glucose)
What is a Disaccharide
Sugars that consist of 2 monosaccharides (like maltose)
How can monosaccharides be distinguished
By their carbonyl group (aldehyde or keytone), as well as the amount of carbon they contain
What do monosaccharides with 5 or more carbons form
Ring structures when dissolved in aqueous environment
What are glucose, fructose, and galactose
isomers (all C6H12O6)
What is another example of a sugar isomer
Alpha and Beta Glucose
What are polysaccharides
Complex carbohydrates that are polymers of monosachharides
What are the three most important polysaccharides
Glycogen (short term energy storage in animal cells), Starch (energy storage in plants and good energy source for humans)
and Cellulose (makes up plant walls, not good source of energy for humans as it is a hard dietary fibre to break down)
What are glycosidic linkages
Covalent bonds holding monosaccharides together where the H from one’s hydroxyl group and the hydroxyl group of another come together
What does a glucose with hydroxyl group down mean
Alpha glucose
What does a glucose with hydroxyl group up mean
Beta Glucose
When a sugar is in the ring form, what is the middle of the ring called
Plane of Ring
Description of starch molecule
1-4 Glycosidic linkage of alpha glucose and humans can break it down for energy
Description of Cellulose molecule
1-4 Linkage of Beta Glucose, humans cannot break down the bonds between Beta glucoses and no energy will be released
What are both carbohydrates and lipids known for
Both have roles of being energy sources
What are roles that carbohydrates play other than energy
Structural support and cell-to-cell communication
What are all biological membranes made of
Lipid molecules
What do lipids provide for nerve cells
Insulation
What is a unique ability for lipids
Waterproofing abilities
What do plants and algae produce alot of every year
millions of tonnes of carbohydrates
What is the most widely known monosaccharide
Glucose
What are the most common monosaccharides
Ones that contain 3 carbons (triose), 5 Carbons (Pentose), or six carbons (Hexose)
What do sugars typically have attached to them
Polar functional groups
What is the relation of sugars and water
Sugars are highly hydrophillic making them soluble in water
What type of sugars are the sweetest
Monosaccharides
What is the relation of disaccharides and water
Because they contain similar polar groups to monosaccharides, they are also soluble in water
What is the most common disaccharide sucrose found in
Table sugar, sugar cane, and sugar beets
What are polysaccharides
hundreds to thousands of monosaccharides linked together
What is polymerization
The process where small sub-units link to form a large molecule
What is the relation of polysaccharides to water
they are very polar, and hydrophilic, however due to size are insoluble in water
How does paper towel work
Uses cellulose fibres to absorb water, but as they are insoluble in water, it does not break down
What are characteristics of lipids
Non Polar compounds made of mostly carbon and hydrogen
Are lipids bigger or smaller than carbohydrates
Lipids are smaller than complex carbs (polysaccharides)
What relation do lipids have with water
Lipids are non polar which means they are insoluble in water, this trait allows them to be present in membranes
What are the 5 main categories of Lipids
Fatty Acids, Fats, Phospholipids, Steroids and Waxes
What are fatty acids
The structural backbones of most lipids, consists of a carboxyl group, and a hydrocarbon chain, as chain length increases water solubility decreases
What are saturated fatty acids
If all carbons are linked with single bonds
What are non saturated fatty acids
Any double bonds means non saturated
Only one double bonds meaning in fatty acid
monounsaturated
More than one double bond in fatty acid
Polyunsaturated
What are fats
Lipids made from fatty acids and glycerol molecule
How many fatty acid chains are joined with a glycerol in a Fat
1-3 fatty acid chains
What are the most well known fats
Triglycerides (3 fatty acid chains attached to one glycerol molecule)
What are saturated fats made of
Saturated fatty acids
What are unsaturated fats made of
Unsaturated fatty acids
Shorter fat chains remain as what at room temperature
Oils at room temperature
What do more saturated fats exist as at room temperature
they get packed together staying solid (butter)
What are fats most commonly used as
Long term energy storage
What are phospholipids
Molecule with a polar end and a non polar end, non polar side consists of glycerol bonded to two fatty acids and a phosphate group
What are Amphipathic molecules
molecules containing both hydrophilic and phobic regions like phospholipids
What do phospholipids make in cells
Lipids bi-layer of cell membranes
What are steroids
A lipid molecule composed of 4 carbon rings used for message transmission (hormones)
What is the most abundant steroid
Sterol, containing a single polar -OH group at one end and a non polar hydrocarbon chain at the other end
What steroid is an important constituent of Plasma membrane around animal cells
Chloresterol
What do high concentrations of cholesterol do
Bad for the body leading to atherosclerosis (plaque build up in blood vessels)
What are waxes
Large lipid molecules formed by long fatty acid chains joined to alcohols or carbon rings
What are characteristics of waxes
Hydrophobic, extremely non polar, soft-solids over a wide range of temperatures
What is used to conserve water and prevent infections in plants
A wax named Cutin
How to birds keep wings dry
secrete a wax
How do bees make honeycombs
Produce beeswax