Amino Acids And Proteins Flashcards

1
Q

Hydrogen bonds, ionic interactions, van der waals interactions, and hydrophobic interactions are all examples of?

A

Non-covalent interactions

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2
Q

What is stronger covalent or non-covalent bonds?

A

Covalent bonds

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3
Q

What are the polar non-charged amino acids?

A

S, T, C, N, Q

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4
Q

What are the aromatic amino acids and what is special about them?

A

F, Y, W, they absorb light

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5
Q

What are the positively charged amino acids?

A

K, R, H

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6
Q

What are the negatively charged amino acids?

A

D, E

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7
Q

How many amino acids are there per turn in the alpha helical secondary structure?

A

3.6

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8
Q

What stabilizes the secondary structure of proteins?

A

H-bonding between peptide bonds

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9
Q

Which two amino acids are not readily found in alpha helical structures?

A

Proline and glycine

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10
Q

Where are proline and glycine frequently found?

A

Beta turns

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11
Q

What is the tertiary structure of proteins usually described in terms of?

A

Domains

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12
Q

What is a domain?

A

Region in polypeptide that fold independently from each other

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13
Q

What is important in the stabilization of tertiary and quaternary structures?

A

Disulfide bridges

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14
Q

What is an ortholog?

A

Protein in different species with same function

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15
Q

What is a paralog?

A

Protein of similar sequence with different function in same species

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16
Q

What is the primary structure of a protein?

A

Sequence of amino acids connected by peptide bonds