ABT LE1 Flashcards

1
Q

Biotechnology definition

A

any biology-based technology which uses organisms or their parts to make or modify products, or improve plants, animals and microorganisms.

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2
Q

Timeline of Biotechnology

  • 1880s
  • 1890s
    — 1929
  • 1940s-1960s
    — 1953
  • 1970s
  • 1980s
    — 1983
    — 1985
  • 1990s
    —1999
  • 2000s
    — 2001
    — 2006
  • 2010s
    — 2011
    — 2012
    — 2015
    — 2018
A
  • 1880s - mammalian and microbial cell cultures
  • 1890s - improved corn
    — 1929 - penicillin
  • 1940s-1960s - plant tissue cultures
    — 1953 - dna structure
  • 1970s - dna technology
  • 1980s - health products in cell cultures
    — 1983 - polymerase chain reaction (pcr)
    — 1985 - zinc finger nuclease
  • 1990s - gm crops; dolly sheep
    —1999 - chromosome sequence
  • 2000s - chromosome mapped
    — 2001 - gene therapy
    — 2006 - pluripotent stem cells
  • 2010s - genome editing tools
    — 2011 - talens
    — 2012 - CRISPR
    — 2015 - gm animal (salmon)
    — 2018 - CRISPR human trials
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3
Q

Ancient Biotechnology

  • 4000 BC
  • 3000 BC
  • 1700 BC
  • 500 BC
A
  • 4000 BC - egyptians discovered yeast and used it to make wine, bread, and cheese; fermentation
  • 3000 BC - peruvians improved potatoes to make them frost tolerant and larger; plant breeding
  • 1700 BC - sumerians started to brew beer
  • 500 BC - first antibiotic in the form of moldy tokwa or soybean curds used to treat boils (china); soy sauce from soybeans (china); more fermentation food products developed
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4
Q

Our Filipino ancestors
practised biotechnology more
than ___________

A

400 years ago

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5
Q

From: History of the Philippine Islands Vols
By ___________

Their drink is a wine made from the (a) and (b)… Drawing off the (c), they distil it…to a greater or less strength, and it becomes (d). This is drunk throughout the islands. It is a (e) of the clarity of water, but strong and dry. If it be used with moderation, it acts as a (f)… If mixed with (g), it makes a (h), and one very palatable and healthful.

A

by Antonio de Morga

a. tops of cocoa (coconut)
b. nipa palm
c. tuba
d. brandy
e. wine
f. medicine
g. Spanish wine
h. mild liquor

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6
Q

Name the typical fermented foods in the Philippines (7)

A
  • tuba - wine from coconut sap
  • bagoong - fermented fish paste
  • wine
  • patis
  • bread
  • cheese - kesong puti
  • beer
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7
Q

plant and animal breeding is biotechnology examples (5)

A
  • selective breeding that enlarged desired traits of the wild mustard plants (Brassica oleracea)
  • china’s panda captive breeding programs
  • bush tomato, australia
  • native and modern corn
  • native chickens from different parts of the world
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8
Q

what practices are considered to be biotechnology? (3)

A
  • cloning a microorganism by multiplying a single cell
  • cloning a plant by separation, cutting, and grating
  • cloning animals by twinning (identical twins)
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9
Q

these are:
- “live” fertilizers
- give benefits (2)

A

Biofertilizers
- with beneficial microorganisms
- reduces fertilizer cost

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10
Q

Advances in ___________ have brought us more and better applications of ___________ in ___________, ___________, ___________!

give examples of this (6)

A
  • science and technology
  • biotechnology
  • health & medicine
  • food and agriculture
  • environment and industry
  • vaccines for animals and humans, tissue culture of plants (from micro parts or from cells), mammalian cell culture, monoclonal antibodies, recombinant dna technology, genetic engineering of microorganisms, plants, and animals
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11
Q

scope of biotechnology

name examples of classical biotechnology (6)

A
  • biofertilizers
  • biological nitrogen fixation
  • fermentation
  • antibiotics
  • vaccines
  • breeding
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12
Q

scope of biotechnology

name examples of modern biotechnology (8)

A
  • recombinant diagnostics
  • dna & protein markers
  • recombinant vaccines
  • recombinant medicines
  • recombinant microorganims
  • genetic engineering of animals
  • genetic engineering of plants
  • genomics
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13
Q
  • The (a) carabao is a (b)
  • The (c) breed of carabao from (d) is an (e)
  • How to transfer the trait? By (f); (g) of (c) breed produced.
A

a. native
b. poor milk producer
c. Murrah
d. India
e. excellent milk producer
f. embryo transfer
g. twin calves

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14
Q

what do cloning thru mammalian cells produces and what is it called?

A

Mammalian cell culture—produce health
therapeutic products
ex. monoclonal antibodies, interferon etc.

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15
Q

how was dolly the sheep created?

A
  • The Roslin Technique of somatic cell nuclear transfer
  • the cell of a white faced sheep (father) and the enucleated egg of a black faced sheep (mother) was fused with electricity
  • dolly is white faced since the cell that contained a dna was from the father
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16
Q

scope of biotechnology

name examples of biotechnologies between classical and modern (3)

A
  • immunodiagnostics
  • plant tissue culture
  • cell culture
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17
Q

who discovered the important concepts of genetics?

A

Gregor Mendel in 1866

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18
Q

important concepts of genetics:

  • Traits are (a) from one (b) to another
  • (c); (genes) control the (d) of organism;
  • there is a (e) of parental traits in (f);
  • Some genes are (g), some are (h)
A

a. inherited
b. generation
c. Elementen
d. traits
e. recombination
f. offspring
g. dominant
h. recessive

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19
Q
  • go:
  • grow:
  • glow:
  • code:
  • these are called?
A
  • carbohydrates; fats
  • proteins
  • vitamins
  • nucleic acids (dna, rna)
  • biomolecules
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20
Q
  • give the 3 important information that contributed to the discovery of the DNA structure
  • these are used by _______ and ____ to discover the ______
A
  1. X-ray diffraction patterns of Rosalind Franklin and
    Maurice Wilkins
  2. Chargaff’s ratio
  3. Physical and chemical properties of constituents:
    bases, sugar, phosphate
    - James Watson; Francis Crick; DNA structure
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21
Q

patterns indicated helical structure of the DNA

  • The distinctive (a) tells this is a (b)
  • (c) backbone deduced to be outside
  • X-ray pattern is (d), so diameter of helix stays the same
  • (e) between bars gives height of one turn
  • (f) denote helical turn
A

X-ray diffraction

a. “X”
b. helix
c. Sugar-phosphate
d. regular
e. Vertical distance
f. Horizontal bars

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22
Q
  • Chargaff observed that the number of the base Guanine (G) equals (a),
  • the number of (b) equals Thymine (T)
  • DNA base ratio (c) (d)
  • In all life forms; (e),
  • ratio will (f) in different species
A

Chargaff’s ratio

a. Cytosine (C)
b. Adenine (A )
c. (pyrimidine and purine bases)
d. 1:1
e. Universal
f. differ

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23
Q
  • Molecular structure of the (a), (b), (c)
  • (d) (size, shape, charge) and (e)
    properties
A

Physico-chemical properties of DNA constituents

a. bases
b. sugar
c. phosphate
d. Physical
e. chemical

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24
Q

what is the meaning of dna and its structure

A

Deoxyribonucleic Acid; double helix

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25
Q

DNAs are long chains of (a) with (b) different bases. The (d) is attached to the (d) and the (e) connected by a (f)

(g) will always pair with (g); and (h) with (h); they are complementary to each other.

A

a. nucleotides
b. four
c. base
d. ribose sugar
e. nucleotides
f. phosphate group
g. A=T
h. G=C

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26
Q

Why was the discovery of Watson and Crick very important?

  • Based on the (a) and (b) properties of DNA, Crick and Watson hypothesized a (c) for DNA, much like a twisted ladder. The (c) explains
  • How the DNA molecule could replicate or produce identical copies of itself (d)
  • How the information in the gene is (e) (f)
A

a. physical
b. chemical
c. double-helix structure
d. replication
e. expressed
f. transcription and translation

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27
Q

Since the (a) of a strand is (b) to that of its partner strand, both strands will actually bear the (c) genetic information.

This process of (d) ensures that the resulting daughter DNA molecules are (e) to the parental DNA helix.

A

a. nucleotide sequence
b. complementary
c. same
d. DNA replication
e. identical

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28
Q
  • The information for traits is encoded in the (a)
  • Some traits are (b); one gene for one trait
    ◦ ex:
  • Some traits are (c); many genes contribute to the formation of the trait
    ◦ ex:
A

genes
simple (ex: color, selected pest resistance traits)
complex (ex: Yield, intelligence)

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29
Q

What is a gene? DNA?

A

Gene
* a DNA
* codes for a trait

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30
Q
  • how is information for a trait encoded in the gene
  • it is the ________ of our traits
A
  • gene > chromosome > genome
  • TOTALITY
31
Q

recount the flow of genetic information

  • The information in the gene is (a) to a (b) single strand called (c) or mRNA; for mRNA, (d) used instead of T
    (thymine)
  • The (e) travels from (f) to (g) and is translated to (h)
A

a. transcribed
b. complementary
c. messenger
d. U (uracil)
e. mRNA
f. nucleus
g. cytoplasm
h. protein

32
Q

summarize the flow of genetic information

A
  • dna polymerase (replication; dna -> dna)
  • rna polymerase (transcription; dna -> rna)
  • ribosome (translation; rna -> protein/trait)
33
Q

“Modern biotechnology” means the application of
- (a), including recombinant DNA technology or direct injection of nucleic acid into cells or organelles
- (b), that overcome natural physiological, reproductive, or
recombination barriers and that are not techniques used in traditional breeding and selection

A

a. in vitro nucleic acid techniques
b. Fusion of cells beyond the taxonomic family

34
Q

In (a), genes of parents are (b); (c) comes with many others which may not have useful or desired traits

A

a. conventional breeding
b. mixed
c. desired gene

35
Q

—is a method that allows the combination of genes in a test tube to form a (a) DNA.
*Design gene for (b)
* Manipulation of an organism’s gene(s) is often referred to as (c); this allows the (d) of a specific gene for a desirable trait

A

Recombinant DNA technology

a. hybrid
b. specific trait
c. genetic engineering or modern biotechnology
d. transfer

36
Q

Basis of Genetic Engineering or Recombinant DNA Technology
- Why is it possible for a gene from an organism to be
introduced and integrated in the genetic material of
another organism, and also be expressed?
- For example, the genes for synthesizing Vitamin A from
microorganism and flower can be introduced into the rice
plant and be expressed in the rice grain!

A

This code is universal across living organisms, and therefore any DNA sequence will encode the same protein in all other organisms. This means that a gene from any organism could function in any other organism.

37
Q

What is the basis for Genetic Engineering?

  • (a) organisms are similar.
  • Their (b) are also similar.
  • They contain the same (c).
  • They follow the same (d).
  • Thus, a (e) organism can work and be expressed!
A

a. Cells of different
b. cellular constituents
c. large and small molecules
d. chemical, physical, and genetic laws
e. gene transferred to a new host

38
Q

who invented recombinant dna technology?

A

Stanley Cohen (plasmids) of Stanford Univ and Herbert Boyer (restriction enzyme) of University of California San Francisco (UCSF) invented recombinant DNAtechnology, 1972

39
Q
  1. —is a method that allows the combination of genes in a test tube to form a (a).
    * Design gene for specific trait
    * (b) [Manipulation] of an (c) is often referred to as genetic engineering or modern biotechnology; this allows the transfer of a (d) for a (e)
A

Recombinant DNA technology

a. hybrid DNA
b. Use
c. organism’s gene(s)
d. specific gene
e. desirable trait

40
Q

Tools are available

  • Cutting (splicing) genes at specific sites by using (a)
  • Ligate DNA fragments by using (b)
  • Synthesize DNA or RNA using (c)
  • Multiply DNA using (d)
A

a. restriction enzymes
b. DNA ligase
c. DNA or RNA polymerase
d. polymerase chain reaction (PCR)

41
Q

Steps in recombinant DNA technology or genetic engineering

A
  1. Isolation of gene from source
    ◦ Extraction of DNA
    ◦ Cloning of gene
  2. Modify gene and prepare gene construct
  3. Introduce to organism (transformation)
  4. Improvement of transgenic plant (conventional breeding)
42
Q
  1. Modify gene and prepare gene construct
A

Insert modified gene in appropriate plasmid or vector
- gene x structural gene

43
Q

Genetic engineering of microorganisms

A

production of human insulin by bacteria

44
Q

steps in genetic engineering

A
  1. isolation of gene
    — extraction of dna
    — cloning of gene
  2. modify gene and prepare gene construct
  3. transformation
  4. improvement of transgenic plant (conventional breeding)
45
Q

When do we use genetic engineering?
* the trait to be introduced is (a)
* the (b) breeding methods
* it will take a (c) by conventional methods

A

a. not present in the germplasm of the crop
b. trait is very difficult to improve by conventional
c. very long time to introduce and/or improve such trait in the crop

46
Q

These are the modern generations or waves of biotech processes or products. Most of the current products belong to the first wave.

A
  • first wave: agronomic traits: biotic or abiotic stresses - production of health products in microorganisms and mammalian cells
  • second wave: quality traits: improved nutrition, quality traits
  • third wave: factories: industrials, pharmaceuticals
  • fourth wave: renewable resources - biofuels from cellulosic materials
47
Q

Global Biotechnology Market

Global biotech market valued at (a)
billion in 2013; Expected to grow at (b) growth rate from 2014 to 2020

  • global biotechnology market revenue, by application
A

a. USD 270.50
b. 12.3%

  • biopharmacy: 62.10%
  • bioservices: 24.70%
  • bioagriculture: 7.50%
  • bioindustrial: 5.50%
48
Q

Current Applications of Modern
Biotechnology

  • global health market
A
  • Insulin for diabetes
  • Interferon for treating cancer
  • Erythropoietin
  • Hepatitis vaccine
  • COVID-19
  • In 2007 : >$75 B, 12.5% growth
49
Q

In 2014, GM crops were grown in __ countries, __ developing countries and __ industrial countries.

Adopted by _________ farmers worldwide, >________ in developing countries in 2014.

A
  • 28; 20; 8
  • 18 million; >15 million

USA, Brazil, Argentina, Canada, India, China,
Paraguay, South Africa, Pakistan, Uruguay,
Bolivia, Philippines, Australia, Burkina Faso,
Myanmar, Mexico, Spain, Chile, Colombia,
Honduras, Sudan, Portugal, Czech Republic,
Cuba, Egypt, Costa Rica, Romania, Slovakia

50
Q
  • ________ is first GM crop commercialized in the Philippines
  • The _____ is the first Asian country to commercialize a _________
  • In 2002, Bt corn was planted to _______.
  • In 2003–2004 to 2007–2008, Bt corn showed consistently ________, inspite of ______ of seed.
  • As of 2019, approximately_______ planted to Bt corn (single trait Bt (________) and HT, (________) and stacked Bt and HT)
  • ______ tested and adopted in the Philippines
  • More than ________of GM corn planted in PHL
  • give single trait crops in the ph
  • give stacked traits crops in the ph
A
  • Bt corn
  • Philippines; genetically modified food crop
  • 10,000 ha
  • higher % ROI; higher cost
  • 800,000 ha; insect protected; herbicide tolerant
  • Foreign biotech products
  • 700,00 ha
  • corn, soybean, canola cotton, potato, sugarbeet, alfalfa, rice
  • corn, cotton
51
Q

Engineering cinnamon-flavored apple

A
  1. extract cinnamon dna
  2. clone cinnamon flavor gene
  3. modify cinnamon flavor gene
  4. insert cinnamon gene into apple cell
  5. breed apple tree
52
Q

Bt corn

  • Higher ________, up to ________ in field tests
  • reduced ________
  • better ________
A
  • yield depending on infestation; 40%
  • pesticide use
  • grain quality
53
Q

Bt stands for

A

Bacillus thuringiensis

54
Q

_________ in Bt corn is toxic specifically to
_________

A

Bt protein; Lepidoptera

55
Q

The Bt technology
* Bt used as ______ for the past _______ with a history of _____
* Bt gene transferred to ____; plant produces ______ which is pesticidal
* In the ___ of larvae
* specific _______ binds with _____ on ___ of target larvae
* recount the process

A
  • microbial pesticide; 35 years; safe use
  • plant genome; toxic protein
  • gut
  • toxic protein; receptors; gut
    Bt protoxin >(alkaline pH) toxin > (receptor) Toxin receptor > “ulcer-like” > death
56
Q

_____ Virus-Resistant Papaya in hawaii

Introduction of ________results in ______ of coat protein ___ and _____ of its synthesis

A
  • ringspot
  • viral coat protein gene; overproduction; RNA; suppression
57
Q

Carnation
* _____ by _____
* Available in (8 countries)

Blue Rose
* Developed by _________
* Used technology for _____________ from pansies

A
  • Moondust Carnation (1996); Florigene
  • Au, Canada, USA, UK, Japan, Germany, Holland,
    Puerto Rico
  • Suntory & Florigene
  • blue carnation-transferred delphinidin genes
58
Q

Transgenic Glofish
- Gene from _____ injected to _____;
- developed by _________

A
  • jellyfish and anemone; eggs of zebra fish
  • Zhiyun Gong of National University of Singapore
59
Q

First Biopharm Drug Approved!

  • _____, an anticlotting drug from GTC Biotherapeutics was approved for release by the _______________________
  • First biotech product produced in _____
A
  • Atryn; European Medicines Agency (June 2006) and US FDA 2009
  • milk of goats
60
Q

Second biopharm drug approved!

  • In ______, _______ was approved by the US
    FDA; also approved in Europe and Japan
  • Treatment for a rare disease, ___________, which causes build-up of lipids in cells of
    various tissues which can lead to liver and
    cardiovascular diseases.
  • _____________is produced in the _______chickens
A
  • December 2015; Kanuma
  • lysosomal acid lipase (LAL) deficiency
  • Recombinant lysosomal acid lipase; egg whites of transgenic
61
Q

Biopharming

  • Production of ________
  • give possible products
  • give possible diseases it can cure
A
  • pharmaceuticals in crops
  • antibodies, antigens, growth factors, hormones, enzymes, blood proteins and collagen
  • cancer, HIV, heart disease, diabetes, Alzheimer’s disease, kidney disease, Crohn’s disease, cystic fibrosis, multiple sclerosis, spinal cord injuries, hepatitis C, chronic obstructive pulmonary disease, obesity and arthritis.
62
Q

Transgenic trout

  • by
  • (complete name)— capability of growing from _____ in _____ compared with nontransgenic; gene construct—_____ promoter + _____ hormone)
A
  • Dr. Arnold Sutterlin
  • AquaAdvantage® Salmon, Tilapia, Trout and Flounder (Developed by Aqua Bounty Farms); egg to market size; half the time; antifreeze protein; salmon growth
63
Q

Bt eggplant project

◆Bt eggplant project led by _______
●Crossed Bt eggplant developed by
________
●Field tested
- with _____________ funds

A
  • Dr. DM Hautea
  • Mahyco with Philippine elite lines
  • ABSPII, USAID, UPLB, DA Biotech
64
Q

Future biotech product

_____________ is field testing ______ with _____

A

Philippine Rice Research Institute (PhilRice); Golden Rice; IRRI

65
Q

Future biotech product

  • _________papaya with _______
  • Institute of ______, College of ______, University of the Philippines Los Baños
A
  • Long shelf life; PRSV resistance
  • Plant Breeding; Agriculture and Food Science
66
Q

GM Salmon “AquAdvantage”

  • Approved for commercial release in
    _____
  • rDNA construct used is composed of
    the _________ from _____ under the control of
    a promoter from another type of fish
    called an ______.
  • AquAdvantage Salmon is not materially different from food derived from _______
A
  • November 2015
  • growth hormone gene; Chinook salmon; ocean pout
  • other Atlantic salmon
67
Q

By prof kwago

  • Traditional Biotechnology meaning
  • examples
  • 6000 BC
  • 4000 BC
A
  • processes that uses organisms or their parts to create new or improve a product
  • fermentation that uses bacteria or yeast to make products like vinegar, soy sauce, patis, bagoong. etc.
  • Sumerians and Babylonians drank beers
  • Egyptians invented bread and cheese
68
Q

By prof kwago

Modern Biotechnology and examples

A
  • processes that focuses on gene level
  • dna markers that are used in forensics, genetic engineering, and genomics
69
Q

By prof kwago

  • Genetic engineering
  • biology: where can dna be found
  • what is dna composed of
A
  • in genetic engineering the traits of an organism can be designed; a gene from an organism can be transferred to other or same organism that can express the desired trait; this organism is called genetically modified organism (gmo)
  • cell > nucleus > dna
  • dna > genes > protein > trait
70
Q

By prof kwago

  • example of gmo
  • how does it work
A
  • bt corn (bacillus thuringiensis corn)
  • the gene of bt bacteria that can poison pest worms is transferred to corn so it can create proteins that can kill worms when it eat the crop, and less pesticides will be used (healthier to humans and environment), 9 metric ton of corn per hectare
71
Q

By prof kwago

  • give an example health products of biotech
  • whats the benefit
  • in what areas can biotech help
A
  • vaccines, antibiotics (penicillin)
  • cheap and effective
  • agriculture, medicine, industry
72
Q

safety of bt
- what does it say

A
  • food and drug administration of department of health released an official statement on september 2002 which was reiterated on june 2013
  • states that all gm food products on the market undergone and passed a strict evaluation in food safety
  • gmo products are safe and as nutritious as conventional crops for consumption of humans, animals, and for processing
  • gmo’s = safe
73
Q
  • first doctor in the vid
  • person in the farm
  • fda director
A
  • Doctor Nina
  • Konsehala Rosalie
  • Doctor Hartigan Go