5.6 Respiration Flashcards

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1
Q

Where does glycolysis occur ?

A

Occurs in the cytoplasm.

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2
Q

What is glycolysis ?

A

Anaerobic process that splits glucose into 2 smaller 3C pyruvate molecules. ATP and reduced NAD are also produced.

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3
Q

What is the first step in glycolysis ?

A

Phosphorylation occurs when 2 ATP molecules react with glucose to form hexose bisphosphate and 2ADP.

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4
Q

What occurs in glycolysis when hexose bisphosphate is formed ?

A

Lysis occurs, which destabilises the molecule causing it to split into 2 trios phosphate molecules.

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5
Q

What occurs when triose phosphate is phosphorylised ?

A

Another phosphate group is added to the triose phosphate to form triose bisphosphate.

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6
Q

What occurs when triose bisphosphate becomes dehydrogenated ?

A

Triose bisphosphate is the oxidised by the removal of the hydrogen atoms to form 2 pyruvate molecules. NAD+ accepts the hydrogen to form NADH. At the same time, 4 ATP molecules are produced using phosphates from triode bisphosphate molecules.

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7
Q

What is glycolysis an example of ?

A

Is an example of substrate - level phosphorylation (the formation of ATP without an electron transport chain).

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8
Q

What are the products of glycolysis ?

A

2 molecules of ATP and 2 reduced NAD molecules.

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9
Q

What is the Link Reaction ?

A

Second step of respiration, where pyruvate turns into acetyl.

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10
Q

Where are the pyruvate molecules transported in the Link Reaction ?

A

Pyruvate molecules are actively pumped into the mitochondria via a pyruvate H+ symport.

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11
Q

Where does the Link Reaction occur ?

A

Occurs in the matrix of mitochondria, when oxygen is present.

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12
Q

What does pyruvate react with in the matrix ?

A

Pyruvate reacts with coenzyme A to form acetyl CoA. Co2 is released and another molecule of NAD+ is reduced.

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13
Q

What is the first step in the Krebs cycle ?

A

Acetate (2C) is removed from acetyl CoA, which joins with oxaloacetate (4C) to form citrate (6C). CoA is reused in the Link Reaction.

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14
Q

What occurs to citrate in the Krebs cycle ?

A

Citrate is decarboxylated releasing CO2. It is also dehydrogenated, releasing 2 H+ ions, which react with NAD+ to form NADH. This leaves behind the 5C compound.

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15
Q

What happens to the 5C compound in the Krebs cycle ?

A

It is decarboxylated and dehydrogenated, releasing CO2 and 2 H+ ions, which react to form NADH and leaves behind a 4C compound.

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16
Q

What happens to the first 4C compound in the Krebs cycle ?

A

It regenerated another molecule of ATP through substrate-level phosphorylation and is then converted to another 4C compound.

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17
Q

What happens to the second 4C compound in the Krebs cycle ?

A

It becomes dehydrogenated and releases 2 hydrogen atoms, which reduce FAD+ to form FADH2 and a different 4C compound.

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18
Q

What happens to the final 4C compound in the Krebs cycle ?

A

Final 4C compound intermediate is converted to oxaloacetate (4C) by dehydrogenation. This produces a molecule of NADH.

19
Q

What is each step of the Krebs cycle activated by ?

A

Each step is enzyme activated.

20
Q

How are fatty acids broken down for respiration ?

A

They are broken down to many molecules of acetyl that then enter the Krebs cycle via Acetyl CoA.

21
Q

How is glycerol broken down for respiration ?

A

It can be converted to pyruvate and then enters the Krebs cycle via the Link Reaction.

22
Q

How are amino acids broken down for respiration ?

A

After deamination, the rest of the molecule enters Krebs cycle directly or is changed to pyruvate or acetyl CoA.

23
Q

What is the first step in oxidative phosphorylation ?

A

Reduced NAD and FAD deliver their hydrogen atoms to the electron transport chain, causing these coenzyme to be re-oxidised.

24
Q

Where do the electrons come from in electron transport chain ?

A

Hydrogen atoms split to produce H+ and e-. The protons go into the solution in the matrix, while electrons are accepted by the first electron carrier protein in ETC.

25
Q

What occurs in the electron carrier protein ?

A

Iron ion (Fe 3+) at the core of the electron carrier, accepts the electron and becomes reduced (Fe2+). This electron is then donated to the next cytochrome in the chain.

26
Q

How are the H+ ions pumped into the inter membrane space in the ETC ?

A

The energy released by the electrons flowing down the electron transport chain are used to pump the H+ ions across the inner membrane and into the intermembrane space, which accumulate due to the permeability of the membrane.

27
Q

What change occurs when protons diffuse through the channels ?

A

The protons diffuse through the channels and cause a conformational change in the ATP synthase enzyme. This catalyses the addition of Pi to ADP to form ATP.

28
Q

What is the final step in the electron transport chain ?

A

Oxygen combines with the electrons that come off the final proteins in the electron transport chain and with the protons that have diffused down the channel, it forms water.

29
Q

What is fermentation process ?

A

Process where complex organic compounds are broken down into simpler inorganic compounds.

30
Q

What is the lactate fermentation pathway ?

A

Pyruvate acts as hydrogen acceptor taking the hydrogen from reduced NAD, catalysed by the enzyme lactate dehydrogenase. Pyruvate is converted to lactate and NAD regenerated.

31
Q

What is lactic acid converted back to ?

A

Converted back to glucose in the liver but oxygen is needed to complete this.

32
Q

Why can’t the lactate fermentation pathway occur indefinitely ?

A

-Reduced quantity of ATP produced would not be enough to maintain vital processes for a long period of time.
-Accumulation of lactic acid causes a fall in pH leading to proteins denaturing. Respiratory enzymes and muscle filaments are made from proteins that will cease to function at a low pH.

33
Q

What are obligate anaerobes ?

A

They cannot survive in the presence of oxygen. Almost all obligate anaerobes are prokaryotes, although there are sone fungi as well.

34
Q

What are facultative anaerobes ?

A

They synthesise ATP by aerobic respiration if oxygen is present, but can switch to anaerobic respiration in the absence of oxygen, eg yeast.

35
Q

What are obligate aerobes ?

A

Can only synthesise ATP in the presence of oxygen. The individual cells of some organisms can be described as facultative anaerobes because they can supplement ATP supplies by employing anaerobic in addition to aerobic respiration when oxygen conc is low.

36
Q

Is alcohol fermentation a reversible process ?

A

No.

37
Q

What is the alcohol fermentation pathway ?

A

Pyruvate is converted to ethanal. This can then accept a hydrogen atom from reduced NAD, becoming ethanol. The regenerated NAD can then continue to act as a coenzyme and glycolysis can continue.

38
Q

Is the alcohol fermentation pathway a short-term process ?

A

Not a short-term process and can continue indefinitely in the absence of oxygen. Ethanol is a toxic waste product to yeast cells and they are unable to survive if the ethanol accumulates above 15%. This allowed to happen during the production of alcohol in brewing.

39
Q

What is the respiratory quotient equation ?

A

RQ = Volume of CO2 given out / Volume of O2 taken in

40
Q

What is the RQ for glucose during anaerobic respiration ?

A

RQ = bigger than 1

41
Q

What is the RQ for carbohydrates during aerobic respiration ?

A

RQ = exactly 1

42
Q

What is the RQ for proteins during aerobic respiration ?

A

RQ = 0.9 approx

43
Q

What is the RQ for lipids during aerobic respiration ?

A

RQ = 0.7 approx