4 - Nucleic acids introduction Flashcards

1
Q

Number of different mammalian mRNAs

A

12,000

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2
Q

Number of mammalian housekeeping mRNAs

A

10,000

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3
Q

Human genome contains how many protein coding genes

A

26,000

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4
Q

Genome exons %

A

1.1

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5
Q

Genome introns %

A

24

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6
Q

Genome intergenic DNA %

A

75

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7
Q

3 components of nucleotides

A
  • 5 carbon sugar
  • one or more phosphate group
  • base
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8
Q

RNA nucleosides

A
  • adenosine
  • guanosine
  • cytidine
  • uridine
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9
Q

DNA nucleosides

A
  • deoxyadenosine
  • deoxyguanosine
  • deoxycytidine
  • thymidine
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10
Q

Nucleic acid sequences are written from

A

5’ to 3’

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11
Q

In B-DNA, bases are ______ apart

A

3.4 A

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12
Q

In B-DNA, there are ______ bases per turn

A

10

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13
Q

Melting curve measures

A

denaturation

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14
Q

ssDNA absorbs ______% more light at 260 nm than dsDNA (due to unstacking)

A

12-40

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15
Q

Melting point, Tm, is the temperature at which

A

half the DNA is single stranded

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16
Q

What forces stabilize a DNA helix?

A
  • Hydrophobic forces
  • Hydrogen bonds
  • Ionic interactions
17
Q

Stacking of bases in DNA is stabilized by

A

hydrophobic interactions and vdW interactions

18
Q

Major force in DNA helix stability

A

hydrophobic interactions from base stacking

19
Q

How do cations increase the stability of DNA helix?

A

By shielding negatively charged phosphate backbone

20
Q

> GC = >

A

Tm

21
Q

ssDNA has greater absorbance at 260 nm than dsDNA due to

A

base stacking

22
Q

Reactive nucleotides are found in proteins as

A

cofactors

23
Q

Tautomers make up only

A

0.1-0.0001% of DNA/RNA bases in solution

24
Q

The glycosidic bond side is in the

A

minor groove